FC921886

Overview
NameFC921886
Unique NameFC921886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length239
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5473 contig Csv1_Contig5473:335..573. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 1433_OENEH (14-3-3-like protein OS=Oenothera elata subsp. hookeri PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 1.150e-35
Identity = 73/78 (93.59%), Postives = 76/78 (97.44%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRIISSIEQKEESRGN+DHVSTIRDYRSKIETELS+IC GILKLLDSRLIP A+SGDSKVFYLKMKGDYHR
Sbjct:   59 IGARRASWRIISSIEQKEESRGNDDHVSTIRDYRSKIETELSNICGGILKLLDSRLIPSAASGDSKVFYLKMKGDYHR 136          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.961e-35
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRIISSIEQKEESRGNEDHV+ IRDYRSKIE+ELS+ICDGILKLLD+RLIP ASSGDSKVFYLKMKGDYHR
Sbjct:   59 IGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHR 136          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 4.369e-35
Identity = 71/78 (91.03%), Postives = 75/78 (96.15%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRIISSIEQKEESRGN+DHV+ IR+YRSKIETELS ICDGILKLLDSRLIP A+SGDSKVFYLKMKGDYHR
Sbjct:   56 IGARRASWRIISSIEQKEESRGNDDHVTAIREYRSKIETELSGICDGILKLLDSRLIPAAASGDSKVFYLKMKGDYHR 133          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 14334_ARATH (14-3-3-like protein GF14 phi OS=Arabidopsis thaliana GN=GRF4 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.660e-34
Identity = 68/78 (87.18%), Postives = 76/78 (97.44%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRIISSIEQKEESRGN+DHV+TIRDYRSKIE+ELS ICDGILKLLD+RL+P +++GDSKVFYLKMKGDYHR
Sbjct:   62 IGARRASWRIISSIEQKEESRGNDDHVTTIRDYRSKIESELSKICDGILKLLDTRLVPASANGDSKVFYLKMKGDYHR 139          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 144.05 bits (362), Expect = 2.169e-34
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRIISSIEQKEESRGN+DHVS IRDYRSKIETELS ICDGILKLLD+ L+P A+SGDSKVFYLKMKGDYHR
Sbjct:   61 IGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPAAASGDSKVFYLKMKGDYHR 138          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 1433A_VICFA (14-3-3-like protein A OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 3.699e-34
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRIISSIEQKEESRGN++HVS IRDYRSKIETELS+IC+GILKLLDSRLIP A+ GDSKVFYLKMKGDYHR
Sbjct:   59 IGARRASWRIISSIEQKEESRGNDEHVSVIRDYRSKIETELSNICNGILKLLDSRLIPSAALGDSKVFYLKMKGDYHR 136          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 14333_SOLLC (14-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.831e-34
Identity = 69/78 (88.46%), Postives = 75/78 (96.15%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRIISSIEQKEESRGNE+HV++IR+YRSKIE ELS ICDGILKLLDS+LIP A+SGDSKVFYLKMKGDYHR
Sbjct:   60 IGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDSKLIPSATSGDSKVFYLKMKGDYHR 137          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 1433_SPIOL (14-3-3-like protein (Fragment) OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.240e-34
Identity = 68/78 (87.18%), Postives = 73/78 (93.59%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            +GARRASWRIISSIEQKEESRGNEDHVS IRDYRS+IE ELS  CDGILKLLD++L+P ASSGDSKVFYLKMKGDYHR
Sbjct:   12 VGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSRIEKELSDNCDGILKLLDTKLVPAASSGDSKVFYLKMKGDYHR 89          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 1433C_TOBAC (14-3-3-like protein C OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.076e-33
Identity = 68/78 (87.18%), Postives = 75/78 (96.15%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRIISSIEQKEESRGNE+HV++IR+YRSKIE ELS ICDGILKLLD++LIP A+SGDSKVFYLKMKGDYHR
Sbjct:   59 IGARRASWRIISSIEQKEESRGNEEHVNSIREYRSKIENELSKICDGILKLLDAKLIPSAASGDSKVFYLKMKGDYHR 136          
BLAST of FC921886 vs. ExPASy Swiss-Prot
Match: 1433_HELAN (14-3-3-like protein OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.398e-33
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = -3
Query:    1 IGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHR 234
            IGARRASWRIISSIEQKEESRGNE HVSTIRDYRSKIE+ELSSICDGILK+LDS+LI  AS GDSKVFYLKMKGDY+R
Sbjct:   60 IGARRASWRIISSIEQKEESRGNEGHVSTIRDYRSKIESELSSICDGILKVLDSKLIGSASGGDSKVFYLKMKGDYYR 137          
The following BLAST results are available for this feature:
BLAST of FC921886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
1433_OENEH1.150e-3593.5914-3-3-like protein OS=Oenothera elata subsp. hook... [more]
1433_PEA1.961e-3592.3114-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
14332_ARATH4.369e-3591.0314-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
14334_ARATH1.660e-3487.1814-3-3-like protein GF14 phi OS=Arabidopsis thalia... [more]
14331_ARATH2.169e-3489.7414-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
1433A_VICFA3.699e-3489.7414-3-3-like protein A OS=Vicia faba PE=2 SV=1[more]
14333_SOLLC4.831e-3488.4614-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 P... [more]
1433_SPIOL8.240e-3487.1814-3-3-like protein (Fragment) OS=Spinacia olerace... [more]
1433C_TOBAC1.076e-3387.1814-3-3-like protein C OS=Nicotiana tabacum PE=1 SV... [more]
1433_HELAN2.398e-3389.7414-3-3-like protein OS=Helianthus annuus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC06053E08T7 RindPdigS Citrus sinensis cDNA clone C06053E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921886 ID=FC921886; Name=FC921886; organism=Citrus sinensis; type=EST; length=239bp
CCTGTGATAATCTCCCTTCATCTTCAAATAGAAAACCTTGGAGTCACCAG
AAGAAGCGCAAGGAATGAGGCGGGAGTCAAGAAGCTTCAAGATGCCGTCG
CAGATCGAGGAAAGCTCGGTCTCGATCTTGGAGCGGTAATCTCGGATCGT
GGAGACGTGGTCCTCGTTGCCGCGGCTCTCCTCTTTCTGTTCGATGGAGG
AAATAATGCGCCAACTGGCACGGCGGGCGCCGATCCCGC
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