CX676516

Overview
NameCX676516
Unique NameCX676516
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.464e-34
Identity = 72/140 (51.43%), Postives = 94/140 (67.14%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 421
            K F+L  D L+PKV P  VK  E++ GDGG G+IKK  F EG+ + Y KHRVD +DK+N  Y+YT I  EGDA    I++++Y+ K+V +PDGGS       ++ K   EIKEEQVK G EK  G+FK +EAY LANP+A
Sbjct:   21 KAFILDADNLIPKVAPTAVKGTEILEGDGGVGTIKKVTFGEGSQYAYVKHRVDGIDKDNLSYSYTLI--EGDALSDVIENIAYDIKLVASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDA 158          
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAV (Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.352e-32
Identity = 67/140 (47.86%), Postives = 93/140 (66.43%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 421
            K FVL  D L+PK+ PQ +K+ E++ GDGGPG+IKK  F EG+ + Y KH++D++DKEN  Y+YT I  EGDA   T++ +SYE+K+V +P GGS       ++ K   EIKEE VK G EK   +FK +E Y   +P+A
Sbjct:   21 KAFVLDADNLVPKIAPQAIKHSEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSIDKENYSYSYTLI--EGDALGDTLEKISYETKLVASPSGGSIIKSTSHYHTKGNVEIKEEHVKAGKEKASNLFKLIETYLKGHPDA 158          
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: MAL12_MALDO (Major allergen Mal d 1 OS=Malus domestica PE=1 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 6.281e-30
Identity = 66/140 (47.14%), Postives = 92/140 (65.71%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 421
            K FVL  D L+PK+ PQ +K+ E++ GDGGPG+IKK  F EG+ + Y KH++D++D+ N  Y YT I  EGDA   TI+ VSYE+K+V +   GS    +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:   21 KAFVLDADNLIPKIAPQAIKHAEILEGDGGPGTIKKITFGEGSQYGYVKHKIDSVDEANYSYAYTLI--EGDALTDTIEKVSYETKLVAS-GSGSIIKSISHYHTKGDVEIKEEHVKAGKEKAHGLFKLIESYLKGHPDA 157          
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: PYRC1_PYRCO (Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.387e-29
Identity = 67/142 (47.18%), Postives = 95/142 (66.90%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 421
            K FVL  D L+PK+ PQ +K+ E++ G+GGPG+IKK  F EG+ + Y KHRVD++D+ +  Y YT I  EGDA   TI+ +SYE+K+V +   GS ST+  +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:   21 KAFVLDADNLIPKIAPQAIKHAEILEGNGGPGTIKKITFGEGSQYGYVKHRVDSIDEASYSYAYTLI--EGDALTDTIEKISYEAKLVAS---GSGSTIKSISHYHTKGDIEIKEEHVKAGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: MAL11_MALDO (Major allergen Mal d 1 OS=Malus domestica GN=MALD1 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.317e-29
Identity = 66/142 (46.48%), Postives = 94/142 (66.20%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTV--VIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 421
            K FVL  D L+PK+ PQ +K  E++ G+GGPG+IKK  F EG+ + Y KHR+D++D+ +  Y+YT I  EGDA   TI+ +SYE+K+V     GS ST+  +  ++ K   EIKEE VK G EK  G+FK +E+Y   +P+A
Sbjct:   21 KAFVLDADNLIPKIAPQAIKQAEILEGNGGPGTIKKITFGEGSQYGYVKHRIDSIDEASYSYSYTLI--EGDALTDTIEKISYETKLVAC---GSGSTIKSISHYHTKGNIEIKEEHVKVGKEKAHGLFKLIESYLKDHPDA 157          
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: BEV1G_BETVE (Major pollen allergen Bet v 1-G OS=Betula verrucosa GN=BETV1G PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.501e-28
Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 421
            K F+L+ D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:   21 KAFILEGDNLIPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: PR1_MEDSA (Class-10 pathogenesis-related protein 1 OS=Medicago sativa GN=MSPR10-1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.879e-28
Identity = 60/139 (43.17%), Postives = 91/139 (65.47%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 418
            K  V   D L+PKV+   ++++E++ G+GG G+IKK  FVEG + KY  H+VD +D  N  YNY+ + G G  +  T++ +S+ESK+   PDGGS + + +K++ K  A   EE++KGG  +  G+FKALE Y LANP+
Sbjct:   21 KALVTDSDNLIPKVI-DAIQSIEIVEGNGGAGTIKKLTFVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPD--TVEKISFESKLSAGPDGGSTAKLTVKYFTKGDAAPSEEEIKGGKARGDGLFKALEGYVLANPD 156          
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: BEV1D_BETVE (Major pollen allergen Bet v 1-D/H OS=Betula verrucosa GN=BETV1D PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.003e-27
Identity = 66/142 (46.48%), Postives = 90/142 (63.38%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 421
            K F+L  D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:   21 KAFILDGDNLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: BEV1L_BETVE (Major pollen allergen Bet v 1-L OS=Betula verrucosa GN=BETV1L PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.310e-27
Identity = 66/142 (46.48%), Postives = 90/142 (63.38%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEG--EGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 421
            K F+L  D L+PKV PQ + +VE I G+GGPG+IKK NF EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGG    +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:   21 KAFILDGDKLVPKVAPQAISSVENIEGNGGPGTIKKINFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPVGD----TLEKISNEIKIVATPDGGCVLKISNKYHTKGNHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
BLAST of CX676516 vs. ExPASy Swiss-Prot
Match: BEV1A_BETVE (Major pollen allergen Bet v 1-A OS=Betula verrucosa GN=BETVIA PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.234e-27
Identity = 66/142 (46.48%), Postives = 90/142 (63.38%), Query Frame = 2
Query:    2 KLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGADWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 421
            K F+L  D L PKV PQ + +VE I G+GGPG+IKK +F EG  +KY K RVD +D  N  YNY+ IEG   GD    T++ +S E K+V TPDGGS   +  K++ K   E+K EQVK   E  + + +A+E+Y LA+ +A
Sbjct:   21 KAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGD----TLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDA 158          
The following BLAST results are available for this feature:
BLAST of CX676516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PRU1_PRUAR2.464e-3451.43Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
PRU1_PRUAV1.352e-3247.86Major allergen Pru av 1 OS=Prunus avium GN=PRUA1 P... [more]
MAL12_MALDO6.281e-3047.14Major allergen Mal d 1 OS=Malus domestica PE=1 SV=... [more]
PYRC1_PYRCO2.387e-2947.18Major allergen Pyr c 1 OS=Pyrus communis GN=PYRC1 ... [more]
MAL11_MALDO5.317e-2946.48Major allergen Mal d 1 OS=Malus domestica GN=MALD1... [more]
BEV1G_BETVE4.501e-2846.48Major pollen allergen Bet v 1-G OS=Betula verrucos... [more]
PR1_MEDSA5.879e-2843.17Class-10 pathogenesis-related protein 1 OS=Medicag... [more]
BEV1D_BETVE1.003e-2746.48Major pollen allergen Bet v 1-D/H OS=Betula verruc... [more]
BEV1L_BETVE1.310e-2746.48Major pollen allergen Bet v 1-L OS=Betula verrucos... [more]
BEV1A_BETVE2.234e-2746.48Major pollen allergen Bet v 1-A OS=Betula verrucos... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70D06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70D06-G12-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676516 ID=CX676516; Name=CX676516; organism=Citrus sinensis; type=EST; length=611bp
CAAACTTTTTGTCCTTCAGTTCGACACCCTTCTGCCCAAAGTCCTGCCTC
AGGTTGTAAAGAACGTTGAATTGATTTCAGGGGATGGAGGCCCTGGAAGC
ATCAAGAAGTTTAACTTTGTTGAAGGTGCTGATTGGAAGTACTTTAAGCA
TAGGGTTGATGCATTGGACAAAGAGAACAAGATATACAATTACACGGCAA
TTGAAGGTGAGGGTGATGCTAACATCCCTACTATTGATCATGTTTCTTAT
GAGAGTAAGGTTGTGGGCACCCCTGACGGAGGAAGCAAGAGCACCGTTGT
TATCAAGTTCTATCCCAAACCAGGTGCCGAGATTAAGGAAGAGCAGGTTA
AGGGAGGCTTGGAAAAGGAGAAGGGAATTTTTAAGGCTCTGGAAGCCTAT
GCCTTGGCAAACCCCAATGCCGTATAAGCTCTTACGTCAACACTTCACCG
CACTTGCGTCGCCTTTGTTGCAACATTATGAATAATCATGTTTATGGCTT
CCGTATGTCGTGTCTCTTTGTTTTCAAATATGCCAATTTATATAATTGGC
TTTTGGCTAAATAAAAAAAAAAAAGAGTTTGCTTTTCCCTTTATCAAAAA
AAAAAAAAAAA
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