CX676508

Overview
NameCX676508
Unique NameCX676508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.896e-25
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT+KEF ALA  AGF+G    CN  N+Y++EF K
Sbjct:  240 MKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.896e-25
Identity = 51/100 (51.00%), Postives = 72/100 (72.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT+KEF ALA  AGF+G    CN  N+Y++EF K
Sbjct:  240 MKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.430e-24
Identity = 51/100 (51.00%), Postives = 71/100 (71.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+LH++ D +C+++L+NCYK+LP +GKV+V    LPE PD+T A+++   +D I L   P G+ERT+KEF ALA  AGFKG N      N++VMEF K
Sbjct:  255 MKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.174e-24
Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+ H++ DE+C+K L+NCY+ALP++GKV+V    LP  PDS+ A++    +D I L   P G+ERT+KEF  LA  AGF+G    CN  N+Y+MEF K
Sbjct:  264 MKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.174e-24
Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+ H++ DE+C+K L+NCY ALP  GKV+V    LP  PD + A++    +DAI L   P G+ERT+KEF ALAI AGFKG    C   N+YVMEF K
Sbjct:  269 MKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.687e-23
Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+ H++ DE+C+K L+NCY+ALP +GKVLV    LPE PD++ A++++  +D + L   P G+ERT+KEF ALA  AGF G    C    ++VMEF+K
Sbjct:  260 MKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.509e-23
Identity = 49/100 (49.00%), Postives = 70/100 (70.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PDS+ A++    +D I L   P G+ERT++EF ALA  AGF+G N  C+  N+YV+EF K
Sbjct:  264 MKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.021e-22
Identity = 47/100 (47.00%), Postives = 70/100 (70.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PD++ A++    +D + L   P G+ERT++EF ALA  +GF+GI   CN  N+YV+EF K
Sbjct:  264 MKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.880e-22
Identity = 47/100 (47.00%), Postives = 68/100 (68.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+ H++ DE+C+++L+NCY ALP +GKV+++   LP  PD++ A++    +DAI L   P G+ERT KEF  LA  AGFKG    C   N++V+EF K
Sbjct:  263 MKWICHDWSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362
[Close]
BLAST of CX676508 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.067e-22
Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = 3 
Query:    6 MKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 305
            MKW+ H++ DE+C+K L+NCY ALP +GKV++    LPE PD+  A+++   +D I L   P G+ERT+KEF  LA  AGFK  N  C   N+++ME  K
Sbjct:  262 MKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361
The following BLAST results are available for this feature:
BLAST of CX676508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
OMT2_CHRAE4.896e-2551.00Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE4.896e-2551.00Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_ZINEL2.430e-2451.00Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_MEDSA3.174e-2450.00Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CLABR3.174e-2453.00Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_CAPAN2.687e-2349.00Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_PRUDU3.509e-2349.00Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_ROSCH1.021e-2247.00Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT3_POPKI3.880e-2247.00Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_OCIBA5.067e-2247.00Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_70C11_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70C11-E22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676508 ID=CX676508; Name=CX676508; organism=Citrus sinensis; type=EST; length=496bp
TTTTAATGAAGTGGATGCTTCATAATTTTGATGATGAGAATTGCATAAAG
ATACTGAGGAATTGTTACAAAGCTCTTCCAAATGATGGAAAGGTACTTGT
TATTAACTCAACGTTGCCAGAAGTGCCTGACAGTACCGAGGCTTCAAGGG
ATTCCTTCATTTTAGATGCAATTTTTTTAATCCAAATTCCTCATGGAAGG
GAGCGGACCAAAAAGGAGTTCACTGCATTGGCAATCGAAGCTGGATTTAA
GGGTATCAACTTTGAATGTAACGTTTGCAATTCCTATGTCATGGAATTCT
ACAAGTAACTTTGAAGCTAGATTGCTTCATTCTTTCTTTATCAGAAAGAT
GCATCTTCTCAATTTTAATTTGGAGTGTCGATACTCCATTTTCTTTTCTG
TAACTTTCTGTTTTGTTTGGCCTTTATGGCTCGCGGGAACTTCTTATGTA
ATGCTTTTGTGTGTTCAATAATATAAGTCCTGTTTGTGTTAAAAAA
back to top