CN183986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN183986 vs. ExPASy Swiss-Prot
Match: IF41_WHEAT (Eukaryotic initiation factor iso-4F subunit p82-34 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 3.988e-62 Identity = 132/227 (58.15%), Postives = 159/227 (70.04%), Query Frame = 3 Query: 105 LPPHGGVASAF-KMGDLRFEGHERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQA------RYLEADNRDWRTRSTTSG-----QEKSLEANQEKMEFGAHEGQLNSQFASAQISTNQGA--GPAPALIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYA 743 L PHGG AS ++GDL E ERVRY+R+QLL L+++ +TE IL+++QEIE+E +G+ QSW N LQ+Q Q R+ E DNRDWR R+ +EKS + +E E G+ QF S++Q A GP PALIKA+VPWSARRGNLSEKDRVLKTVKGILNKLTPEKFD+LKGQL+DSGITT DILK VI LIF+KAV EPTFCPMYA Sbjct: 40 LRPHGGGASGVSRIGDLHSESRERVRYSRDQLLDLRKITDVTEQILRLQQEIEAELNGDDQSWVRNDSNVQLQTQAQPQVQAQNRFTETDNRDWRARTEKPPAPAVQEEKSWDNIREVKEQYNASGRQQEQFNRQDQSSSQKAQVGPPPALIKADVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLLDSGITTADILKDVISLIFEKAVFEPTFCPMYA 266
BLAST of CN183986 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.634e-31 Identity = 83/205 (40.49%), Postives = 120/205 (58.54%), Query Frame = 3 Query: 165 HERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQARYLEADNRDWRTRSTTSGQEKSLEAN----QEKMEFGAHEGQLNSQFASAQISTNQG-------AGPAPA-LIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYA 743 H+R+ YTR+QLLQL + ++ +DILK Q+I E +GE + G AE +++Q+ R+ D+RDW + S + E+ N +E G + + N S+ ++ P + LIKAEVP S +RG +S KD VLKT+K ILN +P+ FD+ KGQLI++ I++ DILK VI LIF+K V EP FC YA Sbjct: 235 HQRISYTRDQLLQLCQNVEVPKDILKFCQDINVELNGEDKISGFGAEKDHVQTPSYKRFDATDSRDWHSWSAQTNWEQKFWDNFSEAKEPYSLGWKQEKFNKPDQSSFHFDSKDQWLKFIKCTPCKSTLIKAEVPLSIQRGIISGKDEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDVINLIFEKVVAEPAFCSTYA 439 The following BLAST results are available for this feature:
BLAST of CN183986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN183986 ID=CN183986; Name=CN183986; organism=Citrus sinensis; type=EST; length=743bpback to top |