CX676452

Overview
NameCX676452
Unique NameCX676452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPD_HUMAN (Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 SV=3)

HSP 1 Score: 310.457 bits (794), Expect = 8.909e-84
Identity = 149/235 (63.40%), Postives = 180/235 (76.60%), Query Frame = 2
Query:    2 TGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAG 706
            +GENSAVLHYGHA APNDRT ++GDM L DMG EY  + SDITCSFP NGKFT+DQ  +Y AVL++  AV+ AMKPGV W DMH+LA++I LE L   G++ G+VD M+ A LGAVFMPHGLGHFLGID HD GGYP+G ER  EPGL+SLRT R LQ  MV+TVEPG YFID LL  A+ + + + F N EV+ RF+ FGGVRIE DV+VT +G + +T VPR + +IEA MAG
Sbjct:  247 SGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPARASFLNREVLQRFRGFGGVRIEEDVVVTDSGIELLTCVPRTVEEIEACMAG 481          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPD_PONAB (Xaa-Pro dipeptidase OS=Pongo abelii GN=PEPD PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.194e-82
Identity = 148/235 (62.98%), Postives = 179/235 (76.17%), Query Frame = 2
Query:    2 TGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAG 706
            +GENSAVLHYGHA APNDRT ++GDM L DMG EY  + SDITCSFP NGKFT+DQ  +Y AVL++  AV+ AMKPGV W DM +LA++I LE L   G++ G+VD M+ A LGAV MPHGLGHFLGID HD GGYP+G ER  EPGL+SLRT R LQ  MV+TVEPG YFID LL  A+ + + + FFN EV+ RF+ FGGVRIE DV+VT +G + +T VPR + +IEA MAG
Sbjct:  247 SGENSAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGKFTADQKAVYEAVLRSSRAVMGAMKPGVWWPDMRRLADRIHLEELAHTGILSGSVDAMVQAHLGAVSMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMVLTVEPGIYFIDHLLDEALADPAHACFFNREVLQRFRGFGGVRIEEDVVVTDSGMELLTCVPRTVEEIEACMAG 481          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPD_RAT (Xaa-Pro dipeptidase OS=Rattus norvegicus GN=Pepd PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.743e-82
Identity = 145/235 (61.70%), Postives = 180/235 (76.60%), Query Frame = 2
Query:    2 TGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAG 706
            +GEN+AVLHYGHA APNDRT +DGD+ L DMG EY  + SDITCSFP NGKFT DQ  IY AVL++   V++ MKPGV W DMH+LA++I LE L + G++ G+VD M+   LGAVFMPHGLGHFLG+D HD GGYP+G ER  EPGL+SLRT R L+  MV+TVEPG YFID LL  A+ + + + FFN EV+ RF++FGGVRIE DV+VT +G + +T VPR + +IEA MAG
Sbjct:  247 SGENAAVLHYGHAGAPNDRTIKDGDICLFDMGGEYYCFASDITCSFPANGKFTDDQKAIYEAVLRSCRTVMSTMKPGVWWPDMHRLADRIHLEELTRIGLLSGSVDAMLQVHLGAVFMPHGLGHFLGLDVHDVGGYPEGVERIDEPGLRSLRTARHLEPGMVLTVEPGIYFIDHLLDQALADPAQACFFNQEVLQRFRNFGGVRIEEDVVVTDSGMELLTCVPRTVEEIEACMAG 481          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPD_MOUSE (Xaa-Pro dipeptidase OS=Mus musculus GN=Pepd PE=2 SV=3)

HSP 1 Score: 305.064 bits (780), Expect = 3.743e-82
Identity = 145/235 (61.70%), Postives = 180/235 (76.60%), Query Frame = 2
Query:    2 TGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIMAG 706
            +GEN+AVLHYGHA APNDRT +DGD+ L DMG EY  + SDITCSFP NGKFT DQ  IY AVL++   V++ MKPGV W DMH+LA++I LE L + G++ G+VD M+   LGAVFMPHGLGHFLG+D HD GGYP+G ER  EPGL+SLRT R L+  MV+TVEPG YFID LL  A+ + + + FFN EV+ RF++FGGVRIE DV+VT +G + +T VPR + +IEA MAG
Sbjct:  247 SGENAAVLHYGHAGAPNDRTIKDGDICLFDMGGEYYCFASDITCSFPANGKFTEDQKAIYEAVLRSCRTVMSTMKPGVWWPDMHRLADRIHLEELARIGLLSGSVDAMLQVHLGAVFMPHGLGHFLGLDVHDVGGYPEGVERIDEPGLRSLRTARHLEPGMVLTVEPGIYFIDHLLDQALADPAQACFFNQEVLQRFRNFGGVRIEEDVVVTDSGMELLTCVPRTVEEIEACMAG 481          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPD_DICDI (Xaa-Pro dipeptidase OS=Dictyostelium discoideum GN=pepd PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.355e-68
Identity = 126/232 (54.31%), Postives = 165/232 (71.12%), Query Frame = 2
Query:    8 ENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISDIEAIM 700
            +NSAVLHYGHA  PN  T  +    L DMGAEY  Y +DITCSFP  GKF+ +Q ++Y AVL A  AV+ AM+PGV WVDMHKLAE+ IL +L K G++VG++ +++A ++G+VF PHGLGHFLG+DTHD GGY        +P + SLRT R L+  MVIT EPGCYFI+ LL  A+ N  T+KFFN   + ++++ GGVRIE D+LVT  G  N++ ++PR I +IEA M
Sbjct:  272 KNSAVLHYGHAGEPNSATISENGFCLFDMGAEYHSYTADITCSFPATGKFSPEQRVVYQAVLDASVAVMEAMRPGVSWVDMHKLAERCILAALLKAGILVGDLQDLIANKIGSVFFPHGLGHFLGLDTHDVGGYLGDC----QPKVHSLRTTRTLKAGMVITSEPGCYFINHLLTQALSNPETAKFFNLTELDKYRNIGGVRIEDDILVTETGCDNLSKNLPRTIDEIEAFM 499          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: YFH6_YEAST (Uncharacterized peptidase YFR006W OS=Saccharomyces cerevisiae GN=YFR006W PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.261e-37
Identity = 88/236 (37.29%), Postives = 127/236 (53.81%), Query Frame = 2
Query:    2 TGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVG--NVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAME-NESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMTSVPREISDIEAIM 700
            +G     LHY      N    +     L+D GAE++ Y SDIT  FP +GKFT++   +Y  VL   N  +  +KPG  W D+H L  K++++     G+     + DE+   R    F PHGLGH LG+D HD GG P   +   +P  + LR  R L+E MVIT EPGCYF   L+   +E +    +  +  V+ R+   GGVRIE D+LVT +G +N+T +  +  +IE I+
Sbjct:  291 SGPACGTLHY----VKNSEDIKGKHSILIDAGAEWRQYTSDITRCFPTSGKFTAEHREVYETVLDMQNQAMERIKPGAKWDDLHALTHKVLIKHFLSMGIFKKEFSEDEIFKRRASCAFYPHGLGHMLGLDVHDVGGNPNYDD--PDPMFRYLRIRRPLKENMVITNEPGCYFNQFLIKEFLEKHPERLEVVDMSVLKRYMYVGGVRIEDDILVTKDGYENLTGITSDPDEIEKIV 520          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: AMPP_ECOLI (Xaa-Pro aminopeptidase OS=Escherichia coli (strain K12) GN=pepP PE=1 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 2.460e-33
Identity = 85/237 (35.86%), Postives = 123/237 (51.90%), Query Frame = 2
Query:    2 TGENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISDIEAIMAGA 709
            +GEN  +LHY      N+    DGD+ L+D G EY+ Y  DIT +FPVNGKFT  Q  IY+ VL++    +   +PG   +++     +I++  L K G++ G+VDE++A      F  HGL H+LG+D HD G Y +   R  EPG             MV+TVEPG Y      VP                       G+RIE D+++T  G++N+T SV ++  +IEA+M  A
Sbjct:  236 SGENGCILHY----TENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPG-------------MVLTVEPGLYIAPDAEVPEQYRGI-----------------GIRIEDDIVITETGNENLTASVVKKPEEIEALMVAA 438          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: AMPP_HAEIN (Xaa-Pro aminopeptidase OS=Haemophilus influenzae GN=pepP PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.552e-32
Identity = 88/233 (37.77%), Postives = 121/233 (51.93%), Query Frame = 2
Query:    5 GENSAVLHYGHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAARLGAVFMPHGLGHFLGIDTHDPGGYPKGTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT-SVPREISDIEAIM 700
            G N+ +LHY      NDR   DGD+ L+D G E+  Y  DIT +FPVNGKF+  Q  IY  VLKA    I  + PG      +    +I  + L   G++ G+VD ++  +    F  HGLGH+LG+D HD G Y +  +R  E G             MVITVEPG Y  +   VP                 ++K   GVRIE ++L+T  G+K +T +VP+EI+DIE +M
Sbjct:  230 GSNACILHY----TENDRPLNDGDLVLIDAGCEFAMYAGDITRTFPVNGKFSQPQREIYELVLKAQKRAIELLVPGNSIKQANDEVIRIKTQGLVDLGILKGDVDTLIEQQAYRQFYMHGLGHWLGLDVHDVGSYGQDKQRILEIG-------------MVITVEPGIYISEDADVPE----------------QYKGI-GVRIEDNLLMTEYGNKILTAAVPKEIADIENLM 428          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_ENTS8 (Xaa-Pro dipeptidase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=pepQ PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.303e-31
Identity = 88/225 (39.11%), Postives = 127/225 (56.44%), Query Frame = 2
Query:    8 ENSAVLHY---GHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDE-MMAARLGAVFMPHGLGHFLGIDTHDPGGYPK---GTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            E++AVLHY    H A    R+F      LLD GAEY  Y +D+T ++  +G   SD + +   V +   A+I  MK GV ++D H    + I + L++  ++    +E M+ A +   FMPHG+GH LG+  HD  G+ +   GT  +       LR  R LQ RMV+T+EPG YFI++LLVP  E    SK FN + I   K FGG+RIE +V++  +G +NMT
Sbjct:  222 EHAAVLHYTRLDHRAPSEMRSF------LLDAGAEYNGYAADLTRTWAADGD--SDFAALIKDVNEEQLALIGTMKAGVSYIDYHIQFHQRIAKLLRRHQIVTDISEEAMVEADITGPFMPHGIGHPLGLQVHDVAGFMQDDTGTHLAAPAKYPYLRCTRVLQPRMVLTIEPGIYFIESLLVPWREG-PFSKHFNWQKIEALKPFGGIRIEDNVVIHEHGVENMT 437          
BLAST of CX676452 vs. ExPASy Swiss-Prot
Match: PEPQ_CITK8 (Xaa-Pro dipeptidase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=pepQ PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.130e-31
Identity = 88/225 (39.11%), Postives = 123/225 (54.67%), Query Frame = 2
Query:    8 ENSAVLHY---GHAAAPNDRTFEDGDMALLDMGAEYQFYGSDITCSFPVNGKFTSDQSLIYNAVLKAHNAVINAMKPGVCWVDMHKLAEKIILESLKKGGVMVGNVDEMMAAR-LGAVFMPHGLGHFLGIDTHDPGGYPK---GTERSKEPGLKSLRTVRELQERMVITVEPGCYFIDALLVPAMENESTSKFFNHEVIGRFKDFGGVRIESDVLVTANGSKNMT 661
            E+++VLHY    H A    R+F      LLD GAEY  Y +D+T ++  N    +D + +   V     A+I  MK GV +VD H    + I + L+K  ++    +E M    L   FMPHG+GH LG+  HD  G+ +   GT  +       LR  R LQ RMV+T+EPG YFI++LL P  E +  SK FN + I   K FGG+RIE +V++  NG +NMT
Sbjct:  222 EHASVLHYTKLDHRAPSEMRSF------LLDAGAEYNGYAADLTRTWAANND--TDYAQLIKDVNDEQLALIATMKAGVSYVDYHIQFHQRIAKLLRKHQIVTDISEEAMVENNLTGPFMPHGIGHQLGLQVHDVAGFMQDDTGTHLAAPSKYPYLRCTRVLQPRMVLTIEPGIYFIESLLAPWREGQ-FSKHFNWQKIEALKPFGGIRIEDNVVIHENGVENMT 437          
The following BLAST results are available for this feature:
BLAST of CX676452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
PEPD_HUMAN8.909e-8463.40Xaa-Pro dipeptidase OS=Homo sapiens GN=PEPD PE=1 S... [more]
PEPD_PONAB2.194e-8262.98Xaa-Pro dipeptidase OS=Pongo abelii GN=PEPD PE=2 S... [more]
PEPD_RAT3.743e-8261.70Xaa-Pro dipeptidase OS=Rattus norvegicus GN=Pepd P... [more]
PEPD_MOUSE3.743e-8261.70Xaa-Pro dipeptidase OS=Mus musculus GN=Pepd PE=2 S... [more]
PEPD_DICDI2.355e-6854.31Xaa-Pro dipeptidase OS=Dictyostelium discoideum GN... [more]
YFH6_YEAST1.261e-3737.29Uncharacterized peptidase YFR006W OS=Saccharomyces... [more]
AMPP_ECOLI2.460e-3335.86Xaa-Pro aminopeptidase OS=Escherichia coli (strain... [more]
AMPP_HAEIN3.552e-3237.77Xaa-Pro aminopeptidase OS=Haemophilus influenzae G... [more]
PEPQ_ENTS82.303e-3139.11Xaa-Pro dipeptidase OS=Enterobacter sakazakii (str... [more]
PEPQ_CITK85.130e-3139.11Xaa-Pro dipeptidase OS=Citrobacter koseri (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_69H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-69H05-O9-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676452 ID=CX676452; Name=CX676452; organism=Citrus sinensis; type=EST; length=917bp
CACTGGTGAGAACAGTGCTGTTCTCCATTATGGGCATGCGGCAGCTCCAA
ATGACAGGACCTTTGAAGATGGAGATATGGCATTGCTTGATATGGGAGCT
GAGTACCAATTTTACGGGTCTGACATTACTTGCTCATTCCCTGTAAATGG
GAAGTTTACAAGTGATCAGAGTCTTATATATAATGCCGTCCTCAAAGCTC
ACAATGCTGTCATAAATGCAATGAAACCTGGAGTGTGCTGGGTGGATATG
CACAAATTGGCAGAGAAAATTATTCTGGAGTCGCTGAAGAAGGGTGGTGT
CATGGTTGGGAATGTGGATGAGATGATGGCTGCACGATTGGGTGCTGTTT
TCATGCCTCATGGTCTTGGGCATTTCTTGGGTATTGACACTCATGATCCT
GGCGGCTACCCAAAGGGAACAGAAAGATCAAAAGAACCTGGCTTAAAATC
TCTACGTACAGTTAGAGAACTCCAGGAGAGAATGGTGATCACAGTGGAGC
CTGGATGTTATTTCATTGATGCTCTGTTGGTCCCAGCCATGGAAAATGAA
AGCACTTCCAAGTTTTTTAATCATGAAGTAATTGGCAGATTCAAAGATTT
TGGCGGTGTTCGCATTGAAAGTGATGTGCTTGTCACTGCCAATGGAAGCA
AGAACATGACTAGTGTACCTCGGGAAATATCAGATATTGAAGCCATAATG
GCAGGCGCTCCATGGCCTTCTAACAAGACTGCTCCATCAAATAGTTGAAA
GTAGTGCCAAAGATCTAAGAATAAGGCTCTGTTAGTGGAAGTTTTGGTCA
TAAACACCAAATTTCTTGTTAGAATTATGAGCCAATTATTTTGAAACTGG
AACTCTGAAACTAGAATTTTATCAAATGGCAAGTGCTTGTCGTTCTCACA
ATTGAATTTGAGTGGTT
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