FC921883

Overview
NameFC921883
Unique NameFC921883
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length197
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6133 contig Csv1_Contig6133:186..382. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921883 vs. ExPASy Swiss-Prot
Match: ALG11_XENTR (Asparagine-linked glycosylation protein 11 homolog OS=Xenopus tropicalis GN=alg11 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.337e-18
Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = -2
Query:    5 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMIS 196
            YPRFT++GQS GSV L WEAL K  P  Y D+ GYAFT PL + + GC+V CY HYPTIS+DM+S
Sbjct:  142 YPRFTLLGQSLGSVVLGWEALTKCVPDIYIDSMGYAFTLPLFKYVGGCQVGCYVHYPTISMDMLS 206          
BLAST of FC921883 vs. ExPASy Swiss-Prot
Match: ALG11_XENLA (Asparagine-linked glycosylation protein 11 homolog OS=Xenopus laevis GN=alg11 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.422e-17
Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = -2
Query:    5 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMIS 196
            YPRFT++GQS GSV L WEAL K  P  Y D+ GYAFT PL + + GC V CY HYPTIS+DM+S
Sbjct:  140 YPRFTLLGQSLGSVVLGWEALTKCVPDIYIDSMGYAFTLPLFKYLGGCHVGCYVHYPTISMDMLS 204          
BLAST of FC921883 vs. ExPASy Swiss-Prot
Match: ALG11_DICDI (Asparagine-linked glycosylation protein 11 homolog OS=Dictyostelium discoideum GN=alg11 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.857e-17
Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = -2
Query:    5 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPL-ARIFGCRVICYTHYPTISLDMIS 196
            YPRFT+IGQS GS+ L WEAL KF P  + D+ GYAFT+P+ + I G  V CY HYPTIS DMIS
Sbjct:  143 YPRFTLIGQSLGSMILGWEALTKFVPTIFLDSMGYAFTFPIFSLIGGSTVACYVHYPTISSDMIS 207          
BLAST of FC921883 vs. ExPASy Swiss-Prot
Match: ALG11_DANRE (Asparagine-linked glycosylation protein 11 homolog OS=Danio rerio GN=alg11 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 7.803e-16
Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = -2
Query:    5 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMIS 196
            YP FT++GQS GS++L WEAL +F P  Y D+ G+AFT P+ R + GC+V  Y HYPTIS DM+S
Sbjct:  142 YPHFTLLGQSVGSIFLGWEALTEFVPDLYIDSMGFAFTLPVFRYLGGCQVGSYVHYPTISTDMLS 206          
BLAST of FC921883 vs. ExPASy Swiss-Prot
Match: ALG11_PONAB (Asparagine-linked glycosylation protein 11 homolog OS=Pongo abelii GN=ALG11 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.019e-15
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = -2
Query:    5 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMIS 196
            YP FT++GQS GS++L WEAL +  P  Y D+ GYAFT PL + I GC+V  Y HYPTIS DM+S
Sbjct:  144 YPHFTLLGQSLGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLS 208          
BLAST of FC921883 vs. ExPASy Swiss-Prot
Match: ALG11_HUMAN (Asparagine-linked glycosylation protein 11 homolog OS=Homo sapiens GN=ALG11 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.019e-15
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = -2
Query:    5 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMIS 196
            YP FT++GQS GS++L WEAL +  P  Y D+ GYAFT PL + I GC+V  Y HYPTIS DM+S
Sbjct:  144 YPHFTLLGQSLGSIFLGWEALMQCVPDVYIDSMGYAFTLPLFKYIGGCQVGSYVHYPTISTDMLS 208          
BLAST of FC921883 vs. ExPASy Swiss-Prot
Match: ALG11_MOUSE (Asparagine-linked glycosylation protein 11 homolog OS=Mus musculus GN=Alg11 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.738e-15
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = -2
Query:    5 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLAR-IFGCRVICYTHYPTISLDMIS 196
            YP FT++GQS GS+ L WEAL +  P  Y D+ GYAFT PL + + GCRV  Y HYPTIS DM+S
Sbjct:  144 YPHFTLLGQSLGSILLGWEALMQRVPDVYIDSMGYAFTLPLFKYVGGCRVGSYVHYPTISTDMLS 208          
BLAST of FC921883 vs. ExPASy Swiss-Prot
Match: ALG11_KLULA (Alpha-1,2-mannosyltransferase ALG11 OS=Kluyveromyces lactis GN=ALG11 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.075e-13
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = -2
Query:    2 YPRFTMIGQSFGSVYLSWEALCKFTPLYYFDTSGYAFTYPLARIFG-CRVICYTHYPTISLDMISR 196
            +P+FT++GQ++GS+ LS EAL    P Y+ DT GY F YP   +F    ++ YTHYP IS DM+ +
Sbjct:  198 WPKFTLLGQAYGSIILSIEALTTLAPDYWIDTMGYPFAYPFVSLFARIPIVTYTHYPVISTDMLQK 263          
The following BLAST results are available for this feature:
BLAST of FC921883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
ALG11_XENTR8.337e-1863.08Asparagine-linked glycosylation protein 11 homolog... [more]
ALG11_XENLA1.422e-1763.08Asparagine-linked glycosylation protein 11 homolog... [more]
ALG11_DICDI1.857e-1763.08Asparagine-linked glycosylation protein 11 homolog... [more]
ALG11_DANRE7.803e-1656.92Asparagine-linked glycosylation protein 11 homolog... [more]
ALG11_PONAB1.019e-1558.46Asparagine-linked glycosylation protein 11 homolog... [more]
ALG11_HUMAN1.019e-1558.46Asparagine-linked glycosylation protein 11 homolog... [more]
ALG11_MOUSE1.738e-1558.46Asparagine-linked glycosylation protein 11 homolog... [more]
ALG11_KLULA8.075e-1346.97Alpha-1,2-mannosyltransferase ALG11 OS=Kluyveromyc... [more]
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Properties
Property NameValue
Genbank descriptionC06053E05T7 RindPdigS Citrus sinensis cDNA clone C06053E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921883 ID=FC921883; Name=FC921883; organism=Citrus sinensis; type=EST; length=197bp
CACGGGATATCATGTCTAAACTTATGGTAGGGTAATGCGTATAACAAATA
ACTCTACAGCCAAATATCCGAGCAAGTGGATACGTAAATGCATACCCACT
AGTATCGAAATAGTATAAAGGTGTAAACTTGCACAAAGCTTCCCATGAAA
GATAGACCGAACCAAAACTTTGACCAATCATTGTAAAGCGAGGATAA
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