CX676440

Overview
NameCX676440
Unique NameCX676440
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.548e-53
Identity = 113/198 (57.07%), Postives = 136/198 (68.69%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSI----NSEDTS----FVSADEEPRASADLEE--TEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGPYGHMVAKRVRD+LPLKLS++WE  +  E VL+ I+ +T  ++    N ED +    FV+A+EEPR SAD+EE  TE  PE FQTLKESFLKAFKVMDREL+ H ++DCFCSGTTAVTLIKQ                                  GQ+LV+GNVGDSRAV+GTRD +++LVA+QLTVDLK
Sbjct:   97 GVFDGHGPYGHMVAKRVRDNLPLKLSAYWEAKVPVEGVLKAITTDTVNNVTNINNPEDAAAAAAFVTAEEEPRTSADMEEENTETQPELFQTLKESFLKAFKVMDRELKFHGSVDCFCSGTTAVTLIKQ----------------------------------GQYLVVGNVGDSRAVMGTRDSENTLVAVQLTVDLK 260          
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C74_ARATH (Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.299e-40
Identity = 93/188 (49.47%), Postives = 114/188 (60.64%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGPYGH+VAKRVRD LPLKL SH E  ++ EEVL+EIS+NT     SED   +SA+ E R     ++  K  +  Q L  S +KA++ MD+EL+M   +DCFCSGTTAVT++KQ                                  GQHLVIGN+GDSRAVLG R+KD+ LV  QLT DLK
Sbjct:  100 GVFDGHGPYGHIVAKRVRDLLPLKLGSHLESYVSPEEVLKEISLNTDDRKISEDLVHISANGESRVYN--KDYVKDQDMIQMLIGSIVKAYRFMDKELKMQVDVDCFCSGTTAVTMVKQ----------------------------------GQHLVIGNIGDSRAVLGVRNKDNKLVPFQLTEDLK 251          
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.176e-39
Identity = 88/188 (46.81%), Postives = 120/188 (63.83%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGPYGH VAK+VRDSLP+K+ + W+ +  +E+     + + +GS+NSE++  V  D+E    AD  ++EK PE F  LK+S+ KAFK+MD+EL+MH T+DCFCSG+TAVTL+KQ                                  G  LV+GN+GDSRA++GTRD  ++L A+QLTVDLK
Sbjct:  120 GVFDGHGPYGHFVAKKVRDSLPVKIRTLWKTS-ANEDTSSHQNGSISGSVNSEESPVV--DDEWGEYAD--DSEKLPEMFLPLKQSYFKAFKLMDKELKMHPTVDCFCSGSTAVTLVKQ----------------------------------GLDLVVGNLGDSRAIMGTRDAANNLTAVQLTVDLK 268          
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C06_ARATH (Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.283e-32
Identity = 83/190 (43.68%), Postives = 110/190 (57.89%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADL-EETEK-FPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGP+GHMV+KRVRD LP  LS+  +    +E+   +  +N+A +           DEE      L E+ EK FPE +  LK + LK  + MD+EL+MH TI+CFCSGTT+VT+IKQ                                  G+ LV+GN+GDSRAVL TRD+D++LVA+QLT+DLK
Sbjct:   97 GVFDGHGPFGHMVSKRVRDMLPFTLSTQLKTTSGTEQSSSKNGLNSAPTC---------VDEEQWCELQLCEKDEKLFPEMYLPLKRALLKTCQQMDKELKMHPTINCFCSGTTSVTVIKQ----------------------------------GKDLVVGNIGDSRAVLATRDQDNALVAVQLTIDLK 243          
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C14_ORYSJ (Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.676e-32
Identity = 82/188 (43.62%), Postives = 113/188 (60.11%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGP GH+VAKRVRD LP+KL +    ++ ++E  R+ S ++  S N ++T             D E+  ++PE F  L+ SFL+AF VMDR+L++H +IDCF SGTTAV ++KQ                                  G++L+IGN+GDSRA+LGTRDKD+ L+A+QLTVDLK
Sbjct:  162 GVFDGHGPNGHLVAKRVRDLLPIKLGA----DLGTDEG-RQTSTSSIKS-NGDETG-----SPGNMGRDAEQNGEYPEIFTALRTSFLRAFNVMDRDLKLHKSIDCFFSGTTAVAVLKQ----------------------------------GRNLIIGNLGDSRAILGTRDKDNQLMAVQLTVDLK 304          
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C38_ORYSJ (Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.853e-31
Identity = 82/188 (43.62%), Postives = 101/188 (53.72%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGPYGH+V+KRVRD LP+KLS++        +  +E S N   S  +E       D +       EE   +PE F  L+ S L+AF VMDR+L+ H TID   SGTTAVT+IKQ                                  G  L+IGN+GDSRAVLGTRD+ D   A+QLTVDLK
Sbjct:  151 GVFDGHGPYGHLVSKRVRDLLPIKLSAN-----LGRDGHKETSTNIVTSSMTEGGGTERMDRDTETPLGTEENGDYPEMFAALRTSLLRAFYVMDRDLKFHKTIDSVFSGTTAVTVIKQ----------------------------------GHDLLIGNLGDSRAVLGTRDEYDQFFAVQLTVDLK 299          
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C18_ARATH (Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.197e-31
Identity = 78/201 (38.81%), Postives = 110/201 (54.73%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEE------------VLREISINTAGSINSEDTSFVSADEEPRASADLE-ETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGP+GHMVAK+VRD+LP  L +  ++   S++               E  + T  S   + T  V+  +E     +     ++ PE +  LK + LK+ + +D+EL+MH TIDCFCSGTT+VTLIKQ                                  G+ LV+GN+GDSRAVL TRD+D++L+A+QLT+DLK
Sbjct:  100 GVFDGHGPFGHMVAKKVRDTLPFTLLTQLKMTSESDQSSLVGANGFQIKCTEEEEVQTTESEQVQKTESVTTMDEQWCELNPNVNNDELPEMYLPLKHAMLKSCQQIDKELKMHPTIDCFCSGTTSVTLIKQ----------------------------------GEDLVVGNIGDSRAVLATRDEDNALLAVQLTIDLK 266          
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.591e-29
Identity = 82/188 (43.62%), Postives = 106/188 (56.38%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGP+GH++A++VRD LP +L      ++  E+     + N+  S   E+ S   AD E R S  L   ++  EFF  +KESF KAFK +D+EL++   ID  CSGTTAVTLIKQ                                  G  L++GN+GDSRAVLGTRD++D LVA QLTVDLK
Sbjct:   77 GVFDGHGPHGHLIARKVRDILPSRLC-----DLIYEDCGDSPTSNSDVSTLEENLS-PYADAECR-SPTLAGQKEHQEFFNAMKESFRKAFKNVDKELKLQRNIDSICSGTTAVTLIKQ----------------------------------GHDLIVGNLGDSRAVLGTRDQNDKLVAHQLTVDLK 223          
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C01_ARATH (Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28
Identity = 74/188 (39.36%), Postives = 103/188 (54.79%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGP+GH+VA++VRDSLP+KL S          +L  I     G I +       A +     A+ EE+ +  +     +E+FLK+F  MD+ELR H  ++CFCSG TAVT+IKQ                                  G +L +GN+GDSRA+LG++D +DS++A+QLTVDLK
Sbjct:   92 GVFDGHGPHGHLVARKVRDSLPVKLLS----------LLNSIKSKQNGPIGTR------ASKSDSLEAEKEESTEEDKLNFLWEEAFLKSFNAMDKELRSHPNLECFCSGCTAVTIIKQ----------------------------------GSNLYMGNIGDSRAILGSKDSNDSMIAVQLTVDLK 229          
BLAST of CX676440 vs. ExPASy Swiss-Prot
Match: P2C52_ARATH (Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.120e-27
Identity = 70/188 (37.23%), Postives = 104/188 (55.32%), Query Frame = -3
Query:  119 GVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQVLNFSFPEYFFLLNFTVLCYPYDRKITIASIFV*GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLK 682
            GVFDGHGPYGH+VA++VRD+LP+KL   ++   + +   +       G+    ++S  +  E  +  +D ++ +          E+FLK+FK MD+ELR H  +DCFCSG+T VT++KQ                                  G +L +GN+GDSRA+LG++D +DS+VA QLTVDLK
Sbjct:   99 GVFDGHGPYGHLVARKVRDTLPVKLQFFFQTLQSKQNCSK-------GTRFRRNSSKSAVQEAVKEGSDEDKLKGL------WGEAFLKSFKAMDKELRSHPNLDCFCSGSTGVTILKQ----------------------------------GSNLFMGNIGDSRAILGSKDSNDSMVATQLTVDLK 239          
The following BLAST results are available for this feature:
BLAST of CX676440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
P2C33_ARATH8.548e-5357.07Probable protein phosphatase 2C 33 OS=Arabidopsis ... [more]
P2C74_ARATH8.299e-4049.47Probable protein phosphatase 2C 74 OS=Arabidopsis ... [more]
P2C66_ORYSJ9.176e-3946.81Probable protein phosphatase 2C 66 OS=Oryza sativa... [more]
P2C06_ARATH1.283e-3243.68Probable protein phosphatase 2C 6 OS=Arabidopsis t... [more]
P2C14_ORYSJ1.676e-3243.62Probable protein phosphatase 2C 14 OS=Oryza sativa... [more]
P2C38_ORYSJ1.853e-3143.62Probable protein phosphatase 2C 38 OS=Oryza sativa... [more]
P2C18_ARATH9.197e-3138.81Probable protein phosphatase 2C 18 OS=Arabidopsis ... [more]
P2C75_ORYSJ6.591e-2943.62Probable protein phosphatase 2C 75 OS=Oryza sativa... [more]
P2C01_ARATH1.124e-2839.36Probable protein phosphatase 2C 1 OS=Arabidopsis t... [more]
P2C52_ARATH2.120e-2737.23Probable protein phosphatase 2C 52 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_69F12_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-69F12-K23-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676440 ID=CX676440; Name=CX676440; organism=Citrus sinensis; type=EST; length=687bp
TTTTTTGGTCTTTTGACTGTTGTCGCTATAATGTTTAATAAAAGAGAAGC
TGTTCAAAAGAACGGAGAGGCACAAAAGGAGAGGGGGGAAGAGAGAGAAA
AAAACCTGGAAGATTTGGTTTGAGATCCACAGTCAACTGCATGGCAACGA
GAGAATCATCTTTGTCTCTTGTGCCCAACACAGCTCTGGAATCCCCAACA
TTTCCAATGACAAGATGTTGACCCTACACAAATATGGAGGCAATTGTTAT
CTTGCGATCATAAGGATAACACAAAACTGTAAAATTTAATAAAAAAAAAT
ATTCAGGAAAGCTAAAATTCAATACCTGCTTGATCAGAGTTACTGCTGTT
GTCCCACTGCAGAAACAATCAATAGTTGCATGCATTCTTAGTTCCCTATC
CATGACTTTGAAAGCCTTCAGAAATGACTCCTTTAGAGTCTGAAAGAACT
CTGGAAACTTTTCTGTTTCCTCAAGATCGGCAGAGGCTCTAGGTTCTTCA
TCGGCAGATACAAAAGATGTATCCTCAGAGTTTATGCTTCCAGCAGTGTT
AATGCTTATCTCTCTCAAAACTTCCTCACTGGTTATGTTCACTTCCCAGT
GAGAGCTCAGTTTTAATGGAAGAGAATCCCTCACTCTCTTCGCAACCATA
TGACCATAGGGACCATGGCCATCAAAAACACCACCCT
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