FC921881

Overview
NameFC921881
Unique NameFC921881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length214
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13533 contig Csv1_Contig13533:555..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.656e-35
Identity = 68/70 (97.14%), Postives = 70/70 (100.00%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.656e-35
Identity = 68/70 (97.14%), Postives = 70/70 (100.00%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPP+RHSIVVNLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.646e-34
Identity = 67/70 (95.71%), Postives = 70/70 (100.00%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+WIDVPP+RHSIVVNLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.788e-34
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.788e-34
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIV+NLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 4.788e-34
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKD QWIDVPP+RHSIVVNLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.788e-34
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG WIDVPP+RH+IVVNLGDQ+EVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNG 227          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 6.253e-34
Identity = 65/70 (92.86%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG W+DVPP++HSIVVNLGDQ+EVITNG
Sbjct:  164 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNG 233          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.167e-34
Identity = 65/70 (92.86%), Postives = 70/70 (100.00%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKP+LIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+WIDVPP+RHSIVVN+GDQ+EVITNG
Sbjct:  162 KVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNG 231          
BLAST of FC921881 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.067e-33
Identity = 65/70 (92.86%), Postives = 69/70 (98.57%), Query Frame = 3
Query:    3 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPLRHSIVVNLGDQIEVITNG 212
            KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDG+W+DVPP+ HSIV+NLGDQIEVITNG
Sbjct:  158 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNG 227          
The following BLAST results are available for this feature:
BLAST of FC921881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
ACCO3_PETHY5.656e-3597.141-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_PETHY5.656e-3597.141-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO2_SOLLC1.646e-3495.711-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO4_SOLLC4.788e-3495.711-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO4_PETHY4.788e-3494.291-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC4.788e-3495.711-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO1_CUCME4.788e-3494.291-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO_DIACA6.253e-3492.86Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO1_DORSP8.167e-3492.861-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO2_MALDO1.067e-3392.861-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]

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Properties
Property NameValue
Genbank descriptionC06053E02T7 RindPdigS Citrus sinensis cDNA clone C06053E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921881 ID=FC921881; Name=FC921881; organism=Citrus sinensis; type=EST; length=214bp
CCAAAGTTAGCAACTACCCACCATGCCCCAAGCCAGATTTGATCAAGGGT
CTCCGGGCTCACACCGACGCCGGCGGCATCATCTTGCTCTTCCAGGATGA
CAAAGTCAGTGGCCTTCAGCTTCTTAAAGATGGCCAGTGGATTGATGTGC
CCCCATTGCGCCACTCCATTGTTGTCAACCTCGGTGACCAAATTGAGGTG
ATCACCAATGGAAT
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