CX676403
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOSSB_DICDI (SOSS complex subunit B homolog OS=Dictyostelium discoideum GN=DDB_G0279223 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15 Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 2 Query: 161 VNMISLKDLSPAAQNNINTKFIVLDK-MKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSEIRWVPH--PNDSHN 526 +N+I + ++ P ++N IN FIVLDK T EG LVAD TA+++ W + +PGDILRL G + + L L GK G ++KIGE+T FVE PN+S W H PN+ N Sbjct: 1 MNLIKVNEIKPYSKN-INCVFIVLDKGPPTKKKEGT--IYQVLVADSTASINMTVWDALGEQIQPGDILRLKGGYSNIYIELLNLYVGKTGIIEKIGEFTFPFVEAPNLSSTLWNVHQDPNNPKN 122
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOSB1_RAT (SOSS complex subunit B1 OS=Rattus norvegicus GN=Obfc2b PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14 Identity = 43/121 (35.54%), Postives = 66/121 (54.55%), Query Frame = 2 Query: 176 LKDLSPAAQNNINTKFIVLDKMKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSEIRWVPHPNDSHNKYVQ 538 +KD+ P +N +N FIVL+ + + ++ VAD+T +++ W D + +PGDI+RLT G S + L L G+ G +QKIGE+ M + E PN SE + + NK VQ Sbjct: 7 VKDIKPGLKN-LNLIFIVLETGRVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLIQPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYNTQQASNKSVQ 126
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOSB1_MOUSE (SOSS complex subunit B1 OS=Mus musculus GN=Obfc2b PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14 Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 2 Query: 176 LKDLSPAAQNNINTKFIVLDKMKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSEIRWVPHPNDSHNKYVQES 544 +KD+ P +N +N FIVL+ + + ++ VAD+T +++ W D + +PGDI+RLT G S + L L G+ G +QKIGE+ M + E PN SE + + NK VQ + Sbjct: 7 VKDIKPGLKN-LNLIFIVLETGRVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLIQPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYNTQQAPNKSVQNN 128
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOSB1_BOVIN (SOSS complex subunit B1 OS=Bos taurus GN=OBFC2B PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.202e-14 Identity = 45/136 (33.09%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 176 LKDLSPAAQNNINTKFIVLDKMKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSEIRWVPHPNDSHNKYVQESVISSHSRIFPPMP 583 +KD+ P +N +N FIVL+ + + ++ VAD+T +++ W D + +PGDI+RLT G S + L L G+ G +QKIGE+ M + E PN SE P+P S + ++V + P P Sbjct: 7 VKDIKPGLKN-LNLIFIVLETGRVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLIQPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSE----PNPEYSAQQAPNKTVQNDSGPAAPQPP 137
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOSB1_HUMAN (SOSS complex subunit B1 OS=Homo sapiens GN=OBFC2B PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.875e-14 Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 176 LKDLSPAAQNNINTKFIVLDKMKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSEIRWVPHPNDSHNKYVQESVISSHSR 565 +KD+ P +N +N FIVL+ + + ++ VAD+T +++ W D + +PGDI+RLT G S + L L G+ G +QKIGE+ M + E PN SE + NK VQ S S+ Sbjct: 7 VKDIKPGLKN-LNLIFIVLETGRVTKTKDGHEVRTCKVADKTGSINISVWDDVGNLIQPGDIIRLTKGYASVFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYSTQQAPNKAVQNDSNPSASQ 135
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOSB1_XENTR (SOSS complex subunit B1 OS=Xenopus tropicalis GN=obfc2b PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.366e-14 Identity = 48/143 (33.57%), Postives = 74/143 (51.75%), Query Frame = 2 Query: 176 LKDLSPAAQNNINTKFIVLDKMKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSEIRWVPHP----NDSHNKYVQE---SVISSHSRIFPPMP 583 +KD+ P +N ++ FIVL+ + + ++ VAD+T +++ W D + +PGDI+RLT G S + L L G+ G +QKIGE+ M + E PN SE P+P S NK Q + +SH+ P P Sbjct: 7 VKDVKPGLKN-LSVLFIVLETGRVTKTKDGHEVRTCKVADKTGSINISVWDDLGNFIQPGDIIRLTKGYASLFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSE----PNPEYIAQQSQNKQAQAESGTGTNSHNSSSPAPP 144
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOSSB_DROME (SOSS complex subunit B homolog OS=Drosophila melanogaster GN=CG5181 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 45/110 (40.91%), Postives = 57/110 (51.82%), Query Frame = 2 Query: 161 VNMISLKDLSPAAQNNINTKFIVLDKMKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSE 490 V I +KD+ P +N IN FIVL+ + + V D TA ++ W + PGDI+RLT G S R L L +GK G V KIGEY M F E+ NMSE Sbjct: 4 VECIPIKDIKPGLKN-INVIFIVLEVGVATVTKENREVRNFKVGDPTACINVSIWDEPGKLIAPGDIVRLTKGYASIWRHCLTLYSGKNGEVFKIGEYCMVFNESVNMSE 112
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOB1B_XENLA (SOSS complex subunit B1-B OS=Xenopus laevis GN=obfc2b-B PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 41/121 (33.88%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 176 LKDLSPAAQNNINTKFIVLDKMKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSEIRWVPHPNDSHNKYVQ 538 +KD+ P +N ++ FIVL+ + + ++ VAD+T ++ W + + +PGDI+RLT G S + L L G+ G +QKIGE+ M + E PN SE S NK Q Sbjct: 7 VKDVKPGLKN-LSVLFIVLETGRVTKTKDGHEVRTCKVADKTGTINISVWDEVGNFIQPGDIIRLTKGYASLFKGCLTLYTGRGGDLQKIGEFCMVYSEVPNFSEPNPEYTAQQSQNKQAQ 126
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOSB2_BOVIN (SOSS complex subunit B2 OS=Bos taurus GN=OBFC2A PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.250e-13 Identity = 44/136 (32.35%), Postives = 72/136 (52.94%), Query Frame = 2 Query: 176 LKDLSPAAQNNINTKFIVLDKMKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSEIRWVPHPN-------DSHNKYVQESVISSHS 562 +KD+ P +N +N FIVL+ + + ++ VAD+T ++ W + +PGDI+RLT G S + L L G+ G +QKIGE+ M + E PN SE P+P+ +HN+ S+ +S++ Sbjct: 11 IKDIKPGLKN-LNVVFIVLEIGRVTKTKDGHEVRSCKVADKTGSITISVWDEIGGLIQPGDIIRLTRGYASMWKGCLTLYTGRGGELQKIGEFCMVYSELPNFSE----PNPDYRGQQNKGAHNEQKNNSMNNSNN 141
BLAST of CX676403 vs. ExPASy Swiss-Prot
Match: SOSB2_HUMAN (SOSS complex subunit B2 OS=Homo sapiens GN=OBFC2A PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 40/116 (34.48%), Postives = 64/116 (55.17%), Query Frame = 2 Query: 167 MISLKDLSPAAQNNINTKFIVLDKMKTAAMEGQNKTCLALVADETAAVHFQFWQDECDAFEPGDILRLTNGIFSYVRKSLVLRAGKRGSVQKIGEYTMAFVETPNMSEIRWVPHPN 514 +I ++D+ P +N +N FIVL+ + + ++ VAD+T ++ W + +PGDI+RLT G S + L L G+ G +QKIGE+ M + E PN SE P+P+ Sbjct: 8 LIFIRDIKPGLKN-LNVVFIVLEIGRVTKTKDGHEVRSCKVADKTGSITISVWDEIGGLIQPGDIIRLTRGYASMWKGCLTLYTGRGGELQKIGEFCMVYSEVPNFSE----PNPD 118 The following BLAST results are available for this feature:
BLAST of CX676403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676403 ID=CX676403; Name=CX676403; organism=Citrus sinensis; type=EST; length=709bpback to top |