FC921879

Overview
NameFC921879
Unique NameFC921879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13533 contig Csv1_Contig13533:1..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 9.948e-48
Identity = 87/114 (76.32%), Postives = 101/114 (88.60%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ME+FPVI++E +NG E AA +  IN+ACE WGFFELVNHGI PE MDTVER+TKAHY+KCMEQ FKELVAS+ALEGIQ EV DMDWEST+++RHLPQS I+EVPDLDEEYR+VM
Sbjct:    1 MESFPVINMEKMNGEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEGIQAEVTDMDWESTYFLRHLPQSNISEVPDLDEEYRRVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 5.459e-46
Identity = 83/114 (72.81%), Postives = 98/114 (85.96%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            MENFP+ISL+ +NG E AA +E I +ACE WGFFELVNHGI  E MDTVE++TK HY+KCMEQ FKELVAS+ALEG+Q EV DMDWESTF+++HLP S I+EVPDLDEEYR+VM
Sbjct:    1 MENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.621e-45
Identity = 80/114 (70.18%), Postives = 97/114 (85.09%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            MENFP+I+LE +NGAE  A +EKIN+ACE WGFFELVNHGI  E MDTVE+LTK HY+KCMEQ FKELVA + LEG++ EV DMDWESTF++RHLP S I+++PDLD+ YR+VM
Sbjct:    1 MENFPIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEGVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.029e-44
Identity = 80/114 (70.18%), Postives = 98/114 (85.96%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            MENFP+I+LE +NG    A +EKI +ACE WGFFELV+HGI  EF+DTVERLTK HYR+C+EQ FKELVAS+ LE ++TEVNDMDWESTFY+RHLP+S I+EVPDL+++YR VM
Sbjct:    1 MENFPIINLEGLNGEGRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEVPDLEDQYRNVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.029e-44
Identity = 81/114 (71.05%), Postives = 96/114 (84.21%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            MENFP+I+LEN+NG E A  +E I +ACE WGFFELVNHGI  E MDTVE+LTK HY+KCMEQ FKELVAS+ LE +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM
Sbjct:    1 MENFPIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.912e-44
Identity = 80/114 (70.18%), Postives = 96/114 (84.21%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            MENFP+I+LE +NG+E  A +E I +ACE WGFFELVNHGI  E MDTVE+LTK HY+KCMEQ FKELVAS+ LE +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM
Sbjct:    1 MENFPIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.138e-43
Identity = 80/114 (70.18%), Postives = 95/114 (83.33%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            MENFP+I+LEN+ GAE  A +E I +ACE WGFFELVNHGI  E MDTVE+ TK HY+KCMEQ FKELVAS+ LE +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM
Sbjct:    1 MENFPIINLENLCGAERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.138e-43
Identity = 79/114 (69.30%), Postives = 95/114 (83.33%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            MENFP+I+LE +NG E A  +E I +ACE WGFFELVNHGI  E MDTVE++TK HY+KCMEQ FKELVAS+ LE +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM
Sbjct:    1 MENFPIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 4.325e-43
Identity = 78/114 (68.42%), Postives = 95/114 (83.33%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            MENFP+I+LE +NG+E A  +E I +ACE WGFFELVNHGI  E MDTVE++TK HY+KCMEQ FKELVAS+ LE +Q EV D+DWESTF++RHLP S I EVPDLD++YR+VM
Sbjct:    1 MENFPIINLEKLNGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNICEVPDLDDQYREVM 114          
BLAST of FC921879 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.147e-42
Identity = 75/114 (65.79%), Postives = 94/114 (82.46%), Query Frame = 1
Query:   91 MENFPVISLENINGAEGAAILEKINEACEKWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQGFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ME FPVI +E +NG E A  +EKI +ACE WGFFELVNHGI  E MDTVERLTK HY KCMEQ FKE+VA++ LE +Q+E+ND+DWESTF++RHLP S I+E+PDL++++RK M
Sbjct:    1 MEAFPVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEAVQSEINDLDWESTFFLRHLPVSNISEIPDLEQDHRKAM 114          
The following BLAST results are available for this feature:
BLAST of FC921879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ACCO_DIOKA9.948e-4876.321-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_PETHY5.459e-4672.811-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO2_SOLLC4.621e-4570.181-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO_PRUMU1.029e-4470.181-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO4_SOLLC1.029e-4471.051-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO3_PETHY3.912e-4470.181-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO4_PETHY1.138e-4370.181-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC1.138e-4369.301-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_TOBAC4.325e-4368.421-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_ACTDE2.147e-4265.791-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06053D12T7 RindPdigS Citrus sinensis cDNA clone C06053D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921879 ID=FC921879; Name=FC921879; organism=Citrus sinensis; type=EST; length=512bp
CGCGGGGGCACTAATTAACAAGCTCACAAACACATACACATACACAAACA
CTCACAAACACACAGCTTGTTAAAGAAAGAATTCAGAGATATGGAGAACT
TCCCCGTTATCAGCTTGGAGAACATCAATGGTGCTGAAGGAGCGGCTATC
TTGGAGAAGATCAACGAGGCCTGTGAGAAATGGGGCTTCTTTGAGCTGGT
GAATCATGGAATTGAGCCGGAGTTTATGGACACAGTGGAGAGATTGACCA
AGGCGCATTACAGAAAATGCATGGAGCAAGGATTCAAGGAGCTTGTTGCA
AGCAGGGCACTTGAAGGTATCCAAACCGAGGTCAATGACATGGACTGGGA
AAGCACTTTCTATGTGCGTCACCTCCCTCAGTCGACCATCAATGAAGTCC
CAGATCTTGATGAGGAATACAGGAAGGTGATGAAGGAATTTGCATTGAAA
TTGGAGAAATTAGCAGAGGAGCTATTGGACTTGTTATGCGAGAATCTTGG
AATAGAGAAGGG
back to top