CX676391

Overview
NameCX676391
Unique NameCX676391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.925e-31
Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = -3
Query:   52 ADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEVDTSSENVINAIMHDVDTDK 282
            ADVDGDG+LNYGEFVAVSVHLKKMANDEHLHKAFSFFD+NQS +IE EEL+ ALNDEVDT+SE V+ AIM DVDTDK
Sbjct:  407 ADVDGDGTLNYGEFVAVSVHLKKMANDEHLHKAFSFFDQNQSDYIEIEELREALNDEVDTNSEEVVAAIMQDVDTDK 483          
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.184e-29
Identity = 63/77 (81.82%), Postives = 70/77 (90.91%), Query Frame = -3
Query:   52 DVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEVD-TSSENVINAIMHDVDTDK 279
            DVDGDG+LNY EFVAVSVHLKKMANDEHLHKAF+FFD+NQSG+IE +EL+ ALNDE+D TSSE VI AIM DVDTDK
Sbjct:  409 DVDGDGTLNYSEFVAVSVHLKKMANDEHLHKAFNFFDQNQSGYIEIDELREALNDELDNTSSEEVIAAIMQDVDTDK 485          

HSP 2 Score: 68.5514 bits (166), Expect = 4.512e-11
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = -2
Query:  575 LQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXGQNIPEADLQILMDAISI 757
            L+V+AE LSVEE AG+KEAFEMMD NKRGKIN           GQ I + DLQILM+A  +
Sbjct:  350 LRVIAEHLSVEEAAGIKEAFEMMDVNKRGKINLEELKYGLQKAGQQIADTDLQILMEATDV 410          
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.952e-22
Identity = 49/76 (64.47%), Postives = 65/76 (85.53%), Query Frame = -3
Query:   52 DVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEVDTSSENVINAIMHDVDTDK 279
            DVD DG L+  EFVA+SVH++K+ NDEHL KAF+FFD+N+SG+IE EEL++AL D+VDT+SE V+ AI+ DVDT+K
Sbjct:  404 DVDKDGYLDVNEFVAISVHIRKLGNDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEVVEAIILDVDTNK 479          
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.281e-21
Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = -3
Query:   52 DVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEVDTSSENVINAIMHDVDTDK 279
            D+D DG L+  EF+A+SVHL+KM NDEHL KAF+FFD+N +G+IE EEL+ AL+DE+ T SE V++AI+ DVDTDK
Sbjct:  413 DIDRDGYLDCDEFIAISVHLRKMGNDEHLKKAFAFFDQNNNGYIEIEELREALSDELGT-SEEVVDAIIRDVDTDK 487          
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.070e-20
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = -3
Query:   52 ADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEVDTSSENVINAIMHDVDTDK 282
            ADV+G+G L+YGEFVAV +HL+KM NDEH  +AF FFD++ SG+IE+EEL+ AL DE+     +VI  IM +VDTDK
Sbjct:  408 ADVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNSVIIDIMREVDTDK 484          
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.601e-16
Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = -3
Query:   52 DVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEVDTSSENVINAIMHDVDTDK 279
            D  G G+L+YGEFVAVS+HL+K+ANDEHL KAFS+FD++ +G+I  +EL +AL ++      +V N I  +VDTDK
Sbjct:  404 DTKGKGTLDYGEFVAVSLHLQKVANDEHLRKAFSYFDKDGNGYILPQELCDALKEDGGDDCVDVANDIFQEVDTDK 479          
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.091e-16
Identity = 42/77 (54.55%), Postives = 57/77 (74.03%), Query Frame = -3
Query:   52 ADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEVDTSSENVINAIMHDVDTDK 282
            ADVDG+G L+YGEFVAV +HL+K+ NDE    AF FFD++ S +IE +EL+ AL DE+     +V++ IM +VDTDK
Sbjct:  412 ADVDGNGFLDYGEFVAVIIHLQKIENDELFKLAFMFFDKDGSTYIELDELREALADELGEPDASVLSDIMREVDTDK 488          
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.691e-13
Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = -3
Query:   55 ADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEVDTSSENVINAIMHDVDTD 282
            ADVDG+GS++Y EF+  ++H  K+  DEHL KAF +FD++ SGFI  +EL++AL  E +    + I  I+ +VDTD
Sbjct:  414 ADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESAL-IEHEMGDTSTIREIISEVDTD 488          
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.820e-13
Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = -3
Query:   55 ADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEVDTSSENVINAIMHDVDTD 282
            ADVDG+GS++Y EF+  ++H  K+  DEHL KAF +FD++ SGFI  +EL++AL  E +    + I  I+ +VDTD
Sbjct:  433 ADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESAL-IEHEMGDTSTIKDIISEVDTD 507          
BLAST of CX676391 vs. ExPASy Swiss-Prot
Match: CDPKO_ARATH (Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.074e-12
Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = -3
Query:   52 ADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNQSGFIETEELQNALNDEV---DTSSENVINAIMHDVDTDK 282
            AD DG+G L+  EFV +S+HLK+M  DEHL +AF +FD+N +GFIE +EL+ AL D+       ++  I  I  DVD +K
Sbjct:  415 ADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGNGFIELDELKVALCDDKLGHANGNDQWIKDIFFDVDLNK 494          
The following BLAST results are available for this feature:
BLAST of CX676391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CDPK8_ARATH3.925e-3184.42Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPK7_ARATH8.184e-2981.82Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
CDPKE_ARATH1.952e-2264.47Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]
CDPKW_ARATH6.281e-2163.16Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPKU_ARATH9.070e-2059.74Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPKD_ARATH1.601e-1653.95Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPKA_ARATH2.091e-1654.55Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPK2_MAIZE3.691e-1347.37Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]
CDPK2_ORYSJ4.820e-1347.37Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CDPKO_ARATH1.074e-1247.50Calcium-dependent protein kinase 24 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_69C06_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-69C06-E11-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676391 ID=CX676391; Name=CX676391; organism=Citrus sinensis; type=EST; length=779bp
TTTTTTTTTTCACTGAACATGAACTTTTGAATTCATATACTGGACACTAA
TCTTGTCCGTATCAACATCATGCATAATAGCATTGATAACATTTTCACTA
CTGGTGTCAACTTCATCATTTAAGGCATTTTGCAGCTCTTCAGTCTCTAT
GAAACCACTCTGATTTCGATCAAAGAATGAAAAAGCTTTATGCAGATGTT
CATCATTGGCCATCTTTTTAAGGTGAACAGAAACTGCGACAAACTCTCCA
TAATTCAAACTTCCGTCACCATCAACATCGGCCTGTAAAATTCAAGGTTT
CAGTCATTCACTTGAAACAGTTAAAAAAGTCAGATTCGAAAATTTAATGC
AACATGCTTCAAATATAGAAATCTGTTTACCCCAACTCATTCATACACTT
GCCTCATTTACCAACTACAGATCTTTTCTCCATTTTTCCTTTGTTTAAAG
AAAATTGTTAATTGCCAGTGTTTCCCATAAAATTTTTAAGATTCTTGAAT
ATTTCCAGTATAGAATGAGCAATCTGTTAGTCACAACTAGTTTAACAAAC
CAAAAAGTAAGATAACAAACATATAATGCTTATAGCATCCATGAGGATTT
GAAGATCTGCTTCAGGAATATTTTGGCCACCTTTTAGCAACCCAAGCCTT
AGCTCCTCAAGGTTTATCTTGCCTCTCTTGTTAGTGTCCATCATCTCAAA
TGCCTCCTTTAAACCAGCCACTTCCTCCACAGACAAAAACTCAGCCACAA
CTTGCAGATATAAATGTCCAGTAAGCTTC
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