CX676382

Overview
NameCX676382
Unique NameCX676382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676382 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSJ (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica GN=Os08g0359500 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.179e-35
Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = -3
Query:  372 MSRHLTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSAISGPDKIPYEVDIDLYDKVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDNKPPADMDFGDLDFS 767
            MSRH  VKWAQR D+VYIT+ L DA+D K+ LEPEG F FSA +G D   YE  ++L DKV+V ESK SVG+R+I  +V+KAE KWW +L++   K P F+KVDWDKW+DED++G      AD++   +DFS
Sbjct:    1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDKVNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG------ADVNVDGMDFS 126          
BLAST of CX676382 vs. ExPASy Swiss-Prot
Match: Y8359_ORYSI (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica GN=OsI_027940 PE=1 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.179e-35
Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = -3
Query:  372 MSRHLTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSAISGPDKIPYEVDIDLYDKVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEEGKDNKPPADMDFGDLDFS 767
            MSRH  VKWAQR D+VYIT+ L DA+D K+ LEPEG F FSA +G D   YE  ++L DKV+V ESK SVG+R+I  +V+KAE KWW +L++   K P F+KVDWDKW+DED++G      AD++   +DFS
Sbjct:    1 MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDKVNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG------ADVNVDGMDFS 126          
BLAST of CX676382 vs. ExPASy Swiss-Prot
Match: Y3377_ARATH (Uncharacterized protein At3g03773 OS=Arabidopsis thaliana GN=At3g03773 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.049e-28
Identity = 58/114 (50.88%), Postives = 82/114 (71.93%), Query Frame = -3
Query:  426 MSRHLTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSAISGPDKIPYEVDIDLYDKVDVNESKASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEE 767
            MSR+  V WAQR+D+VY+T+ LPDA+D+ +K EP+G F FSA+ G     +E  ++LY K+ + E + +VGLRNI + ++K E  WW+RLLK   KP  ++KVDW+KW DEDEE
Sbjct:    1 MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSAL-GAQGERFEFSLELYGKI-MTEYRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE 112          
BLAST of CX676382 vs. ExPASy Swiss-Prot
Match: YOCA_CAEEL (Uncharacterized protein ZC395.10 OS=Caenorhabditis elegans GN=ZC395.10 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.124e-12
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = -3
Query:  426 MSRHLTVKWAQRTDRVYITIDLPDAQDVKLKLEPEGKFFFSAISGPDKIPYEVDIDLYDKVDVNESK-ASVGLRNIHYLVKKAENKWWSRLLKQAGKPPVFLKVDWDKWIDEDEE 767
            M++  TV WAQR   VY+TI++ +A+  +LK E   K  F   S  DK  YE  ++ +D++D    K      R +   V+K    WW RLL+  GK   +LKVD+ KW DEDE+
Sbjct:    1 MAKQPTVLWAQRESLVYLTIEVDEAKIEELKGEGN-KLHFQGSSKTDK--YEATLEFFDEIDPASVKHTGSSTRVVEITVQKKTPAWWPRLLQNKGKVH-WLKVDFGKWKDEDED 111          
BLAST of CX676382 vs. ExPASy Swiss-Prot
Match: WOS2_SCHPO (Protein wos2 OS=Schizosaccharomyces pombe GN=wos2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.960e-12
Identity = 44/117 (37.61%), Postives = 70/117 (59.83%), Query Frame = -3
Query:  426 VKWAQRTDR-------VYITIDLPDAQDVKLKLEPEGKFFFSAISGPDKIPYEVDIDLYDKVDVNESKASVGLRNIHYLVKKAE--NKWWSRLLKQAGKPPVFLKVDWDKWIDEDEE 749
            V WAQR+++       +Y+T+ +PDA D K+ L PE K    + SG +   Y V ID +  +DV +SK SV  R I +++ K E   ++W RL K+  +   +L+ D+D+W+DEDE+
Sbjct:   10 VLWAQRSNKDDAEKNVIYLTVLIPDAVDPKINLTPE-KLVIDSKSGANA-HYAVQIDFFKDIDVEKSKYSVTGRYIFFVLYKKELQEEFWPRLTKEKLRLH-WLRTDFDRWVDEDEQ 123          
The following BLAST results are available for this feature:
BLAST of CX676382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
Y8359_ORYSJ1.179e-3555.30Uncharacterized protein Os08g0359500 OS=Oryza sati... [more]
Y8359_ORYSI1.179e-3555.30Uncharacterized protein OsI_027940 OS=Oryza sativa... [more]
Y3377_ARATH9.049e-2850.88Uncharacterized protein At3g03773 OS=Arabidopsis t... [more]
YOCA_CAEEL3.124e-1239.13Uncharacterized protein ZC395.10 OS=Caenorhabditis... [more]
WOS2_SCHPO6.960e-1237.61Protein wos2 OS=Schizosaccharomyces pombe GN=wos2 ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_69B10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-69B10-C19-4.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676382 ID=CX676382; Name=CX676382; organism=Citrus sinensis; type=EST; length=781bp
TTTTTTTTTTTTTTTTTGCAGAAAACATCGTATGATTTTATCTATCTAGT
GTGATAGTATTCAAATCCAATACAAACAAGAACGGAGCAGGAAAACCAAG
GGCTCCCCAAATAAAAAGTATAACCACAGGCAAGCATTATAACATTGTTG
TTTGTTGTCCAACACTTAAATGTTGCTACCTTAAGAGTTCACAACATATC
CAAGTGAAAGCTTCAAGCTGTCTTGGTATCAGGCTCACTGGAAGTAGATG
GTGGTGGTGCTTCCCTGTTCCCTGCTGGTGTTGCTCCCACCTCATTCTCC
TCTTCTGTGTCACTCTCATCATTTTCATCACCGCCGGCAGCTTCAGCATC
AAAACCTCCCATGTTCATTTTAGAGAAGTCAAGATCCCCGAAGTCCATAT
CAGCTGGAGGTTTATTATCCTTCCCTTCCTCATCCTCATCAATCCACTTA
TCCCAATCAACTTTCAGAAATACAGGAGGTTTTCCTGCCTGCTTTAGCAG
CCTGCTCCACCATTTGTTTTCTGCCTTTTTCACAAGGTAATGGATATTTC
TCAAGCCAACACTAGCTTTGCTCTCATTGACATCAACCTTGTCGTACAAA
TCAATGTCAACTTCATAGGGTATCTTATCTGGTCCACTGATAGCAGAGAA
GAAAAATTTTCCTTCAGGCTCCAATTTAAGCTTCACATCTTGAGCATCAG
GCAGGTCAATGGTTATGTAGACCCTATCAGTCCTCTGGGCCCATTTCACA
GTAAGATGCCGGCTCATCTTGTCGATAAAAA
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