FC921876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_NEUCR (40S ribosomal protein S5 OS=Neurospora crassa GN=rps-5 PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.055e-28 Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSPLRRVNQ+I+LLT GAREASFRN+KSIAECLAEELINAAK SSNSYAIKKKDELERVAKSNR Sbjct: 143 VRRQAVDVSPLRRVNQAIALLTTGAREASFRNVKSIAECLAEELINAAKGSSNSYAIKKKDELERVAKSNR 213
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5B_SCHPO (40S ribosomal protein S5-B OS=Schizosaccharomyces pombe GN=rps5b PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.838e-28 Identity = 61/71 (85.92%), Postives = 69/71 (97.18%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSPLRRVNQ+++L+TIGAREA+FRN+KSI+ECLAEE+INAAK SSNSYAIKKKDELERVAKSNR Sbjct: 133 VRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDELERVAKSNR 203
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5A_SCHPO (40S ribosomal protein S5-A OS=Schizosaccharomyces pombe GN=rps5a PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.838e-28 Identity = 61/71 (85.92%), Postives = 69/71 (97.18%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSPLRRVNQ+++L+TIGAREA+FRN+KSI+ECLAEE+INAAK SSNSYAIKKKDELERVAKSNR Sbjct: 133 VRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDELERVAKSNR 203
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.432e-27 Identity = 61/71 (85.92%), Postives = 67/71 (94.37%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVD+SPLRRVNQ+I LLT GAREA+FRNIKSIAECLA+ELINAAK SSNSYAIKKKDE+ERVAK+NR Sbjct: 127 VRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 197
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.874e-27 Identity = 60/71 (84.51%), Postives = 67/71 (94.37%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVD+SPLRRVNQ+I LLT GAREA+FRNIK+IAECLA+ELINAAK SSNSYAIKKKDE+ERVAK+NR Sbjct: 137 VRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 207
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_YEAST (40S ribosomal protein S5 OS=Saccharomyces cerevisiae GN=RPS5 PE=1 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26 Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 3 Query: 9 RQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 RQAVDVSPLRRVNQ+I+LLTIGAREA+FRNIK+IAE LAEELINAAK SS SYAIKKKDELERVAKSNR Sbjct: 157 RQAVDVSPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDELERVAKSNR 225
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_PODCA (40S ribosomal protein S5 OS=Podocoryne carnea GN=RPS5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26 Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDV+PLRRVNQ+I LL GAREASFRNIKSIAECLA+ELINAA+ SSNSYAIKKKDELERVAKSNR Sbjct: 140 VRRQAVDVAPLRRVNQAIWLLCTGAREASFRNIKSIAECLADELINAARGSSNSYAIKKKDELERVAKSNR 210
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus GN=Rps5 PE=2 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26 Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSPLRRVNQ+I LL GAREA+FRNIK+IAECLA+ELINAAK SSNSYAIKKKDELERVAKSNR Sbjct: 134 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKNIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4) HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26 Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSPLRRVNQ+I LL GAREA+FRNIK+IAECLA+ELINAAK SSNSYAIKKKDELERVAKSNR Sbjct: 134 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
BLAST of FC921876 vs. ExPASy Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3) HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26 Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 3 Query: 3 VLRQAVDVSPLRRVNQSISLLTIGAREASFRNIKSIAECLAEELINAAKSSSNSYAIKKKDELERVAKSNR 215 V RQAVDVSPLRRVNQ+I LL GAREA+FRNIK+IAECLA+ELINAAK SSNSYAIKKKDELERVAKSNR Sbjct: 134 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204 The following BLAST results are available for this feature:
BLAST of FC921876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921876 ID=FC921876; Name=FC921876; organism=Citrus sinensis; type=EST; length=323bpback to top |