EY649924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.589e-40 Identity = 78/87 (89.66%), Postives = 86/87 (98.85%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 274 LAKSHEVL+TVE+GSIGGFGSHVVQF+ALDGLLDG +KWRP+VLPDRYIDHGSPADQLA+AGLTPSHIAATVFNILGQTREALE+M+ Sbjct: 633 LAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREALEVMT 719
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 8.718e-39 Identity = 76/87 (87.36%), Postives = 82/87 (94.25%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREALEIMS 274 LA SHEVL+TVEEGSIGGFGSHV QF+ALDGLLDG +KWRPLVLPDRYIDHGSPADQLA+AGLTPSHIAATVFN+LGQ REAL IM+ Sbjct: 630 LASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAIMT 716
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.178e-35 Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREAL 262 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDG +KWRP+VLPDRYIDHG+PADQLA+AGL PSHIAAT N++G REAL Sbjct: 634 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_RHOP5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.546e-19 Identity = 48/80 (60.00%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTR 253 LA+ HEVLITVEEGSIGGFGSHV+Q LA G+LDG V+ R LVLPD ++DH +PA A+AGL I VF LG+ + Sbjct: 554 LAREHEVLITVEEGSIGGFGSHVMQTLAEHGMLDGEVRMRSLVLPDEFMDHDTPAVMYARAGLDAKGIVKKVFEALGKDK 633
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_BRASO (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=dxs PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.546e-19 Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 247 LA+ HE+LIT+EEGSIGGFGSHV+Q+LA G+LDG +K R +VLPD + DH +PA A+AGL I VF +LG+ Sbjct: 554 LARDHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEVLGK 631
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium loti GN=dxs PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.019e-19 Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 259 LA+SHEVL+TVEEG+IGGF SHV+QFLA +GLL+ +K RPLVLPD + DH P A AGL + I TVF L T A Sbjct: 553 LARSHEVLVTVEEGAIGGFASHVLQFLAHEGLLESGLKVRPLVLPDVFTDHAKPEKMYADAGLDAAGIVRTVFTALDHTARA 634
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_RHOPT (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=dxs PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.637e-19 Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 247 LA+ HEVL+T+EEGSIGGFGSHV+Q LA G+LDG VK R LVLPD ++DH +P A+AGL I VF++LG+ Sbjct: 554 LARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_RHOPA (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris GN=dxs PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 2.637e-19 Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 247 LA+ HEVL+T+EEGSIGGFGSHV+Q LA G+LDG VK R LVLPD ++DH +P A+AGL I VF++LG+ Sbjct: 554 LARDHEVLLTIEEGSIGGFGSHVMQTLAEHGMLDGEVKMRALVLPDVFMDHDNPVAMYARAGLDAKAIVKKVFDVLGK 631
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.444e-19 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQTREA 259 LA+ HEVL+TVEEGSIGGFG+HV+ FLA +GLL+ +K RPLV+PD ++D P A+AGL + I TVF LGQ +A Sbjct: 566 LAREHEVLVTVEEGSIGGFGAHVLHFLAHEGLLENGLKVRPLVMPDIFMDQAKPEKMYAKAGLDAAGIVKTVFAALGQAEQA 647
BLAST of EY649924 vs. ExPASy Swiss-Prot
Match: DXS_BRASB (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=dxs PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.498e-19 Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 2 Query: 14 LAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGTVKWRPLVLPDRYIDHGSPADQLAQAGLTPSHIAATVFNILGQ 247 LA+ HE+LIT+EEGSIGGFGSHV+Q+LA G+LDG +K R +VLPD + DH +PA A+AGL I VF LG+ Sbjct: 554 LAREHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGK 631 The following BLAST results are available for this feature:
BLAST of EY649924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649924 ID=EY649924; Name=EY649924; organism=Citrus sinensis; type=EST; length=518bpback to top |