FC921867

Overview
NameFC921867
Unique NameFC921867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length384
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6859 contig Csv1_Contig6859:3..386. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: UMEC_ARMRU (Umecyanin OS=Armoracia rusticana PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.161e-19
Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 3
Query:   60 PNGPATYSDWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSARG 335
            P+ P  Y  WA  +TF VGD L F+FAAG HDV  VT+ +F+ C   +P+S  T  P  + L  +GP Y+IC+   HC  GQKL+INV   G
Sbjct:   14 PSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 105          
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19
Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 3
Query:   60 PNGPATYSDWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSARG 335
            P  P  Y+ WA  +TF VGD L F+FAAG HDV  V++++F  C    P+S  T  P  + L  +GP YFIC+   HC  GQKL+I V A G
Sbjct:   36 PMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAG 127          
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.861e-18
Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 3
Query:   18 TRHVVGDALALIVPPNGPATYSDWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSA 329
            T + VGD    ++  +    YS WA+++TF VGD+LVFN+ AG H V  V +S + +C + + +S  +    ++ L  +G HYFIC  PGH  GG KL+I V A
Sbjct:   25 TVYTVGDTSGWVIGGD----YSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKA 124          
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: CPC_CUCSA (Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17
Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 3
Query:   12 RQTRHVVGDALALIVPPNGPATYSDWAANQTFTVGDTLVFNFAAGNHDVTRV-TQSSFNAC---NTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSA 329
            + T H+VGD     VP + P  YS WAA +TF VGD+L FNF A  H+V  + T+ SF+AC   N+ + + RT  SP    L   G HYF+C+   HC  GQKL+INV A
Sbjct:    1 QSTVHIVGDNTGWSVP-SSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERT--SPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVA 107          
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 4.131e-17
Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 3
Query:   54 VPPNGPATYSDWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 323
            +PP+   ++++WA    F VGD +VF + +G   V  VT+ ++N+CNTT+PL+  T+    V L  SGP YFI    GHC  GQKL++ V
Sbjct:   42 IPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVV 131          
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: STEL_RHUVE (Stellacyanin OS=Rhus vernicifera PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.050e-16
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 3
Query:   18 TRHVVGDALALIVPPNGPATYS-DWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVSAR 332
            T + VGD+    VP  G   Y   WA+N+TF +GD LVF +    H+V +VTQ ++ +CN T+P++        + L   G  Y+IC  P HC  GQK+ INV+ R
Sbjct:    1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINVTVR 106          
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.017e-15
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 3
Query:   18 TRHVVGDALALIVPPNGPATYSDWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINV 323
            T H VGD+         P  Y+ WA++  F VGD+L+FN+    H+V +V Q  F +CN++SP +  T+   S+ L   G  YF+C  PGHC  GQK+ I V
Sbjct:    2 TVHKVGDSTGWTTLV--PYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101          
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.796e-12
Identity = 34/91 (37.36%), Postives = 50/91 (54.95%), Query Frame = 3
Query:   63 NGPATYSDWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKL-AINVSAR 332
            N P  Y  W+    F V DTL F++A G   V  V ++ ++ACNT +P+ R  +  + ++L   GP YFI     +C  GQKL  + +SAR
Sbjct:   42 NPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 132          
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = 3
Query:   78 YSDWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCL--GGQKLAINVSA 329
            YS WA  +TF VGD L F + + +H V  V ++ ++ C+ +S     ++    + L   G +YFICS PGHC   GG KLA+NV A
Sbjct:   42 YSGWATGKTFRVGDILEFKYGS-SHTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNVVA 126          
BLAST of FC921867 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12
Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 3
Query:   30 VGDALALIVPPNGPATY--SDWAANQTFTVGDTLVFNFAAGNHDVTRVTQSSFNACNTTSPLSRTTNSPASVTLTASGPHYFICSFPGHCLGGQKLAINVS 326
            V +++   V   G  T+  S W A +TF  GD LVF +    H+V  V    + +C T SP SR   S       + G +YFICS PGHC GG K+A+  +
Sbjct:   27 VAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSC-TASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLKIAVTAA 126          
The following BLAST results are available for this feature:
BLAST of FC921867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
UMEC_ARMRU1.161e-1946.74Umecyanin OS=Armoracia rusticana PE=1 SV=1[more]
BCB1_ARATH3.379e-1946.74Blue copper protein OS=Arabidopsis thaliana GN=BCB... [more]
BCP_PEA2.861e-1840.38Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
CPC_CUCSA1.854e-1746.36Cucumber peeling cupredoxin OS=Cucumis sativus PE=... [more]
ENL1_ARATH4.131e-1742.22Early nodulin-like protein 1 OS=Arabidopsis thalia... [more]
STEL_RHUVE2.050e-1639.62Stellacyanin OS=Rhus vernicifera PE=1 SV=1[more]
MAVI_CUCPE1.017e-1540.20Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
ENL2_ARATH1.796e-1237.36Early nodulin-like protein 2 OS=Arabidopsis thalia... [more]
BCB2_ARATH4.001e-1240.70Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 ... [more]
BABL_LILLO4.001e-1237.62Chemocyanin OS=Lilium longiflorum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC06053C12T7 RindPdigS Citrus sinensis cDNA clone C06053C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921867 ID=FC921867; Name=FC921867; organism=Citrus sinensis; type=EST; length=384bp
CAGAGCTCTAAAGACAGACAAGGCATGTGGTGGGTGATGCACTAGCCTTG
ATTGTTCCTCCTAATGGTCCTGCTACTTACTCTGACTGGGCTGCAAACCA
GACCTTCACCGTCGGTGACACTCTTGTGTTTAACTTTGCCGCTGGAAACC
ATGATGTTACTCGAGTAACACAATCATCATTCAATGCATGCAACACCACT
AGTCCCCTATCCAGAACCACAAATAGCCCTGCGAGTGTTACTCTTACAGC
TTCTGGGCCACACTACTTCATTTGCTCATTTCCAGGCCACTGCCTCGGCG
GTCAGAAATTAGCCATCAACGTTAGTGCCAGGGGATCTTCTCCTGCTCCT
CAACCTTCTTCTCCGGCCCCTCAGCCCGGCGGTA
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