CX676126

Overview
NameCX676126
Unique NameCX676126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.198e-65
Identity = 116/129 (89.92%), Postives = 127/129 (98.45%), Query Frame = -3
Query:  222 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE 608
            KP+QEVIAEMT+GGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHK+AVFKTHPMNLLNERTLKGTFFGNYKPRSD+PSVVEKYM+KELE+EKFITHT+PF+EINKAF+ ML+GEGLRCII ME+
Sbjct:  252 KPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITMED 380          
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.487e-65
Identity = 115/129 (89.15%), Postives = 126/129 (97.67%), Query Frame = -3
Query:  222 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE 608
            KP+QEVIAEMT+GGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHK+AVFKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYM+KELE+EKFITHT+PF+EINKAF+ ML+GEGLRCII ME+
Sbjct:  252 KPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITMED 380          
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.487e-65
Identity = 115/129 (89.15%), Postives = 126/129 (97.67%), Query Frame = -3
Query:  222 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE 608
            KP+QEVIAEMT+GGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHK+AVFKTHPMN LNERTLKGTFFGNYKPRSD+PSVVEKYM+KELE+EKFITHT+PF+EINKAF+ ML+GEGLRCII ME+
Sbjct:  252 KPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITMED 380          
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 1.465e-63
Identity = 112/129 (86.82%), Postives = 124/129 (96.12%), Query Frame = -3
Query:  222 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE 608
            KP+QEVIAEMT+GGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHK+AVFKTHP+N LNERTLKGTFFGNYKPRSD+P VVEKYM+KELE+EKFITHT+PF+EINKAF+ ML+GEGLRCII M +
Sbjct:  252 KPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITMAD 380          
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 2.499e-63
Identity = 113/129 (87.60%), Postives = 123/129 (95.35%), Query Frame = -3
Query:  222 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE 608
            KP+QEVIAE+TN GVDRS+ECTG  +AMISAFECVHDGWGVAVLVGVPHKDAVFKTHP+N LNERTLKGTFFGNYK R+D+PSVVEKYM+KELE+EKFITH VPFSEINKAFEYML+GEGLRCIIRMEE
Sbjct:  252 KPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKGEGLRCIIRMEE 380          
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 5.567e-63
Identity = 110/129 (85.27%), Postives = 123/129 (95.35%), Query Frame = -3
Query:  222 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE 608
            KP+QEVIAE+TNGGVDRS+ECTG+I AMI AFECVHDGWGVAVLVGVPHKDAVF THPMN LNERTLKGTFFGNYKPR+D+PSVVEKYM+KELEV+KFITH +PFS+INKAF+YML+GEG+RCII MEE
Sbjct:  252 KPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGIRCIITMEE 380          
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 6.155e-62
Identity = 110/128 (85.94%), Postives = 121/128 (94.53%), Query Frame = -3
Query:  225 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME 608
            KP+QEV+AEMTNGGVDRSVECTG+I+AMI AFECVHDGWGVAVLVGVPHKDA FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPF+EINKAF+ M +GEG+RCIIRME
Sbjct:  251 KPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLMAKGEGIRCIIRME 378          
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.791e-61
Identity = 109/128 (85.16%), Postives = 121/128 (94.53%), Query Frame = -3
Query:  225 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME 608
            KP+QEV+A+MTNGGVDRSVECTG+I+AMI AFECVHDGWGVAVLVGVPHKDA FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KELEVEKFITH+VPFSEINKAF+ M +GEG+RCIIRME
Sbjct:  251 KPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINKAFDLMAKGEGIRCIIRME 378          
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.055e-61
Identity = 109/129 (84.50%), Postives = 120/129 (93.02%), Query Frame = -3
Query:  222 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRMEE 608
            KP+Q+VIAEMTNGGVDR+VECTG I AMISAFECVHDGWGVAVLVGVP KD  FKTHPMN LNERTLKGTF+GNYKPR+DLP+VVEKYM  ELE+EKFITHTVPFSEINKAF+YML+GE +RCII+MEE
Sbjct:  252 KPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKMEE 380          
BLAST of CX676126 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 5.211e-61
Identity = 109/128 (85.16%), Postives = 120/128 (93.75%), Query Frame = -3
Query:  225 KPIQEVIAEMTNGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMSKELEVEKFITHTVPFSEINKAFEYMLRGEGLRCIIRME 608
            KP+Q+V+AEMTNGGVDRSVECTG+I+AMI AFECVHDGWGVAVLVGVPHKDA FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AF+ M +GEG+RCIIRME
Sbjct:  251 KPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
The following BLAST results are available for this feature:
BLAST of CX676126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH1_SOLTU1.198e-6589.92Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH3_SOLTU3.487e-6589.15Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU3.487e-6589.15Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLLC1.465e-6386.82Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH_MALDO2.499e-6387.60Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH_FRAAN5.567e-6385.27Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH1_MAIZE6.155e-6285.94Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH1_PENAM1.791e-6185.16Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_PEA3.055e-6184.50Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_ORYSJ5.211e-6185.16Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_67C11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-67C11-E21-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676126 ID=CX676126; Name=CX676126; organism=Citrus sinensis; type=EST; length=610bp
AATGAATCTGTTATTTGTTCACACTCACACTGAATTTGTTCTCATCACTT
TTTTTAAAAAAAAAAATTCGCAAACAAGTATACAACGGAAAGGCACTAGA
AAATAACGTTTTACATTATGACCACAAAACAACAATACTTATAAAGACAT
CTTTGCAAATATTAAAATTTTGAACATGACAATGACACAGACCACTTTGA
ATTATTTATCTACACAAACTACTCTTCCATCCGGATGATGCATCGGAGAC
CTTCTCCTCTAAGCATGTACTCAAAGGCCTTGTTGATTTCGGAGAATGGG
ACTGTATGGGTAATGAATTTTTCCACTTCAAGCTCCTTGCTCATATATTT
TTCTACAACCGAAGGAAGGTCAGAACGAGGCTTGTAGTTTCCAAAGAAGG
TGCCCTTAAGAGTTCTTTCATTCAACAAATTCATGGGGTGCGTCTTGAAC
ACAGCATCTTTGTGAGGAACGCCCACAAGAACAGCCACACCCCAGCCATC
GTGGACACATTCGAAAGCTGAAATCATGGCATCAATATGTCCAGTGCACT
CCACACTTCTGTCCACTCCTCCATTCGTCATTTCGGCAATTACCTCTTGA
ATTGGTTTAT
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