FC921855

Overview
NameFC921855
Unique NameFC921855
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13533 contig Csv1_Contig13533:1..507. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.813e-49
Identity = 89/113 (78.76%), Postives = 103/113 (91.15%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            E+FPVI++E +NG ERAA +  IN+ACENWGFFELVNHGI PE MDTVER+TKAHY+KCMEQRFKELVAS+ALEGIQ EV DMDWEST+++RHLPQS I+EVPDLDEEYR+VM
Sbjct:    2 ESFPVINMEKMNGEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEGIQAEVTDMDWESTYFLRHLPQSNISEVPDLDEEYRRVM 114          
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 9.948e-48
Identity = 85/113 (75.22%), Postives = 100/113 (88.50%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ENFP+ISL+ +NG ERAA +E I +ACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+ALEG+Q EV DMDWESTF+++HLP S I+EVPDLDEEYR+VM
Sbjct:    2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVM 114          
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 8.422e-47
Identity = 82/113 (72.57%), Postives = 99/113 (87.61%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ENFP+I+LE +NGAER A +EKIN+ACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVA + LEG++ EV DMDWESTF++RHLP S I+++PDLD+ YR+VM
Sbjct:    2 ENFPIINLEKLNGAERVATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEGVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVM 114          
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.876e-46
Identity = 82/113 (72.57%), Postives = 100/113 (88.50%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ENFP+I+LE +NG  R A +EKI +ACENWGFFELV+HGI  EF+DTVERLTK HYR+C+EQRFKELVAS+ LE ++TEVNDMDWESTFY+RHLP+S I+EVPDL+++YR VM
Sbjct:    2 ENFPIINLEGLNGEGRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEAVKTEVNDMDWESTFYLRHLPKSNISEVPDLEDQYRNVM 114          
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.876e-46
Identity = 83/113 (73.45%), Postives = 98/113 (86.73%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ENFP+I+LEN+NG ERA  +E I +ACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM
Sbjct:    2 ENFPIINLENLNGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVM 114          
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 7.129e-46
Identity = 82/113 (72.57%), Postives = 98/113 (86.73%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ENFP+I+LE +NG+ER A +E I +ACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM
Sbjct:    2 ENFPIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVM 114          
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 82/113 (72.57%), Postives = 97/113 (85.84%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ENFP+I+LEN+ GAER A +E I +ACENWGFFELVNHGI  E MDTVE+ TK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I+EVPDLD+EYR+VM
Sbjct:    2 ENFPIINLENLCGAERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYREVM 114          
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 2.074e-45
Identity = 81/113 (71.68%), Postives = 97/113 (85.84%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ENFP+I+LE +NG ERA  +E I +ACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I++VPDLDEEYR+VM
Sbjct:    2 ENFPIINLEKLNGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYREVM 114          
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 7.882e-45
Identity = 80/113 (70.80%), Postives = 97/113 (85.84%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            ENFP+I+LE +NG+ERA  +E I +ACENWGFFELVNHGI  E MDTVE++TK HY+KCMEQRFKELVAS+ LE +Q EV D+DWESTF++RHLP S I EVPDLD++YR+VM
Sbjct:    2 ENFPIINLEKLNGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEAVQAEVTDLDWESTFFLRHLPVSNICEVPDLDDQYREVM 114          
BLAST of FC921855 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.912e-44
Identity = 77/113 (68.14%), Postives = 96/113 (84.96%), Query Frame = 1
Query:   94 ENFPVISLENINGAERAAILEKINEACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRALEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVM 432
            E FPVI +E +NG ERA  +EKI +ACENWGFFELVNHGI  E MDTVERLTK HY KCMEQRFKE+VA++ LE +Q+E+ND+DWESTF++RHLP S I+E+PDL++++RK M
Sbjct:    2 EAFPVIDMEKLNGEERAPTMEKIKDACENWGFFELVNHGISHELMDTVERLTKEHYNKCMEQRFKEMVATKGLEAVQSEINDLDWESTFFLRHLPVSNISEIPDLEQDHRKAM 114          
The following BLAST results are available for this feature:
BLAST of FC921855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ACCO_DIOKA1.813e-4978.761-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_PETHY9.948e-4875.221-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO2_SOLLC8.422e-4772.571-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO_PRUMU1.876e-4672.571-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO4_SOLLC1.876e-4673.451-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO3_PETHY7.129e-4672.571-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO4_PETHY2.074e-4572.571-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC2.074e-4571.681-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO_TOBAC7.882e-4570.801-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_ACTDE3.912e-4468.141-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06053B10T7 RindPdigS Citrus sinensis cDNA clone C06053B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921855 ID=FC921855; Name=FC921855; organism=Citrus sinensis; type=EST; length=512bp
CGCGGGGGCACTAATTAACAAGCTCACAAACACATACACAAACACAAACA
CTCACAAACACACAGCTTGTTAAAGAAAGAATTCAGAGATACGGAGAACT
TCCCCGTTATCAGCTTGGAGAACATCAATGGTGCTGAAAGAGCGGCTATC
TTGGAGAAGATCAACGAGGCCTGTGAGAACTGGGGCTTCTTTGAGCTGGT
GAATCATGGAATTGAGCCGGAGTTTATGGACACAGTGGAGAGATTGACCA
AGGCGCATTACAGAAAATGTATGGAGCAAAGATTCAAGGAGCTTGTTGCA
AGCAGGGCACTTGAAGGTATCCAAACCGAGGTCAATGACATGGACTGGGA
AAGCACTTTCTATGTGCGTCACCTCCCTCAGTCGACCATCAATGAAGTCC
CAGATCTTGATGAGGAATACAGGAAGGTGATGAAGGAATTTGCATTGAAA
TTGGAGAAATTAGCAGAGGAGCTATTGGACTTGTTATGCGAGAATCTTGG
ATTAGAGAAGGG
back to top