FC921853

Overview
NameFC921853
Unique NameFC921853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13538 contig Csv1_Contig13538:1..269. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC921853 vs. ExPASy Swiss-Prot
Match: Y1487_ARATH (Uncharacterized protein At1g14870 OS=Arabidopsis thaliana GN=At1g14870 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.331e-28
Identity = 50/85 (58.82%), Postives = 64/85 (75.29%), Query Frame = -3 
Query:    1 QQQHANVHQLVEGPWSSGLCDCFSDCSTCCLTCWRPCITFGRIADIVDKGSSSCSVSGALYLVISLVTGCGCLYSSCYRSKMRQQ 255
            + QH +     EG WS+G CDCFSDC  CC+T W PCITFG++A+IVD+GS+SC  +GALY +I++VTGC C+YS  YR KMR Q
Sbjct:    2 EAQHLHAKPHAEGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIYSCFYRGKMRAQ 86
The following BLAST results are available for this feature:
BLAST of FC921853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1487_ARATH2.331e-2858.82Uncharacterized protein At1g14870 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC06053B08T7 RindPdigS Citrus sinensis cDNA clone C06053B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921853 ID=FC921853; Name=FC921853; organism=Citrus sinensis; type=EST; length=269bp
CTGCTGCCTCATTTTAGATCGATAGCAGGACGAGTATAAGCAACCGCAGC
CAGTCACCAAAGATATTACAAGATAAAGTGCGCCACTCACACTACAAGAA
GAAGATCCTTTGTCAACAATATCAGCAATTCGACCAAAAGTGATGCAGGG
GCGCCAACATGTCAAGCAACAGGTTGAGCAATCGGAGAAGCAGTCACAGA
GTCCTGAGGACCAAGGTCCCTCTACGAGCTGATGCACATTCGCATGTTGC
TGCTGGAAACCAGCTACCG
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