CX676026

Overview
NameCX676026
Unique NameCX676026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX676026 vs. ExPASy Swiss-Prot
Match: UGPI6_ARATH (Uncharacterized GPI-anchored protein At1g61900 OS=Arabidopsis thaliana GN=At1g61900 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.001e-13
Identity = 34/59 (57.63%), Postives = 40/59 (67.80%), Query Frame = 3 
Query:  429 LNVFTLESGCLLPSLPLDVNYDKTSGIGFICDLNDNIEAPWPSASFVPAGFCNETSKLP 605
            L V   ESGCLLPSLP D  +DK +GI F CDLNDNI APWPS+S   A  C +  ++P
Sbjct:  341 LQVGNQESGCLLPSLPSDAIFDKDTGISFTCDLNDNIPAPWPSSSLSSASTCKKPVRIP 399
The following BLAST results are available for this feature:
BLAST of CX676026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UGPI6_ARATH4.001e-1357.63Uncharacterized GPI-anchored protein At1g61900 OS=... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_66E04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66E04-J8-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676026 ID=CX676026; Name=CX676026; organism=Citrus sinensis; type=EST; length=606bp
CTGTGTAAACCATTGCACTGTTGCATAAATTTAACCAGTGGCAGTGATAG
ACCTTTTGAAAAGTCAATACTAATTACACATTCTATATCTATGCACTAGA
CTTCACTTACTGATGTAATATCATGCATTAGGAAATTTTTGTTTTTTTAC
ATTTCATCTGGCCTTCTTTCATTGGGTTTAATCTGATTTTCGAACGTTGC
CCCCAAGGGGGCAGCCTAGTTGGTTGAGGAATTGGGATTTGGTGCTTGGC
TGTATTGATGTCTTAGTTCGATCCTTCTGGTGGCTTAAAAGCTTCACCCT
TTGTTGTCTCATGGGTCATGGGGTTGGGATGCCCAACTGACCTCTCAATT
TAGAGCCTACCCGGGGCGGATCCATGGTCCAAGTCAGTGTGGGAGTTTGT
TTTTTTCTAAAAAAAAGAAATCTAATTTTTGAATGTCTTTACACTAGAAT
CTGGTTGCCTTTTGCCGAGCCTGCCTTTGGATGTGAACTATGATAAAACT
TCAGGAATTGGCTTCATCTGTGATCTTAATGACAACATTGAAGCCCCTTG
GCCCTCTGCTTCTTTCGTACCAGCTGGATTCTGCAATGAAACTTCCAAAC
TTCCGG
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