CX676024
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 7.349e-37 Identity = 81/121 (66.94%), Postives = 89/121 (73.55%), Query Frame = -1 Query: 271 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFM-HSEHAPLSN 630 AVPTH+ VMEIIITF LVYTVYATAADPKKGSLGTIAP+AIG VGANILAAGPFSGGSMNPARSFGPAVA+G+F +W+YWV GNVFM SEH PL++ Sbjct: 127 AVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEHVPLAS 247
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.647e-36 Identity = 83/124 (66.94%), Postives = 88/124 (70.97%), Query Frame = -1 Query: 265 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFMHSEHAPL--SNDY 630 +VPTH VMEIIITF LVYTVYATAADPKKGSLG IAPIAIGF VGANILAAGPFSGGSMNPARSFGPAVASG+F NWIYW G+VF+ + HAPL S DY Sbjct: 127 SVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNWIYWAGPLIGGALAGFIYGDVFI-TAHAPLPTSEDY 249
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35 Identity = 82/124 (66.13%), Postives = 86/124 (69.35%), Query Frame = -1 Query: 265 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFMHSEHAPL--SNDY 630 AVPTH VMEIIITF LVYTVYATAADPKKGSLGTIAPIAIGF VGANILAAGPFSGGSMNPARSFGPAV +G+F NWIYW G+VF+ H PL S DY Sbjct: 127 AVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDVFIGC-HTPLPTSEDY 249
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35 Identity = 82/124 (66.13%), Postives = 86/124 (69.35%), Query Frame = -1 Query: 265 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFMHSEHAPL--SNDY 630 AVPTH VMEIIITF LVYTVYATAADPKKGSLGTIAPIAIGF VGANILAAGPFSGGSMNPARSFGPAV +G+F NWIYW G+VF+ H PL S DY Sbjct: 127 AVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDFSQNWIYWAGPLIGGGLAGFIYGDVFIGC-HTPLPTSEDY 249
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.088e-35 Identity = 78/122 (63.93%), Postives = 84/122 (68.85%), Query Frame = -1 Query: 265 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFMHSEHAPLSNDY 630 A+PTH MEI+ITF LVYTVYATAADPKKGSLGTIAPIAIGF VGANILAAGPFSGGSMNPARSFGPAVA+GNF NW+YWV G+VF+ S DY Sbjct: 127 AIPTHGVAGISELEGVV-MEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYGDVFIGSYQPVADQDY 247
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.267e-35 Identity = 76/120 (63.33%), Postives = 85/120 (70.83%), Query Frame = -1 Query: 271 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFMHSEHAPLSN 630 A PTH MEII+TFGLVYTVYATAADPKKGSLGTIAPIAIGF VGANIL AGPFSGGSMNPARSFGPAVASG++ + WIYWV V+M +HAP+++ Sbjct: 127 ATPTHGLSGVGAFEGVV-MEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYMCGDHAPVAS 245
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 2.614e-34 Identity = 78/123 (63.41%), Postives = 85/123 (69.11%), Query Frame = -1 Query: 265 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFMHS-EHAPLSNDY 630 +VPTH VMEI++TF LVYTVYATAADPKKGSLGTIAPIAIGF VGANILAAGPFSGGSMNPARSFGPAV SG+F WIYWV G+VF+ S AP + Y Sbjct: 127 SVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIGSYAPAPTTESY 249
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 4.459e-34 Identity = 71/93 (76.34%), Postives = 76/93 (81.72%), Query Frame = -1 Query: 352 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 630 A+PTH MEI+ITF LVYTVYATAADPKKGSLGTIAP+AIGF VGANILAAGPFSGGSMNPARSFGPAVA+GNF NW+YWV Sbjct: 127 AIPTHGVSGISEIEGVV-MEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWV 218
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.605e-34 Identity = 70/93 (75.27%), Postives = 75/93 (80.65%), Query Frame = -1 Query: 352 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWV 630 A+PTH V EI+ITF LVYTVYATAADPKKGSLGTIAPIAIGF VGANILAAGPFSGGSMNPARSFGPAVA+ +F NW+YWV Sbjct: 127 AIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWV 219
BLAST of CX676024 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.694e-33 Identity = 75/116 (64.66%), Postives = 81/116 (69.83%), Query Frame = -1 Query: 283 AVPTHNXXXXXXXXXXXVMEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFXVGANILAAGPFSGGSMNPARSFGPAVASGNFQDNWIYWVXXXXXXXXXXXXXGNVFMHSEHA 630 +VPTH VMEI++TF LVYTVYATAADPKKGSLGTIAPIAIGF VGANILAAGPFSGGSMNPARSFGPAV SG+ WIYWV G+VF+ S A Sbjct: 127 SVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAGLIYGDVFIGSYEA 242 The following BLAST results are available for this feature:
BLAST of CX676024 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676024 ID=CX676024; Name=CX676024; organism=Citrus sinensis; type=EST; length=630bpback to top |