CX676023

Overview
NameCX676023
Unique NameCX676023
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 8.716e-81
Identity = 153/191 (80.10%), Postives = 165/191 (86.39%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            +AFG FDDSFSL S +AYLAEFISTLLFVFA VGSAIA+ K+T+DAALD  GLVAIA+CHGFALFVAVAIGANISGGHVNPAVTFGLA+GGQIT++TG+FYWIAQLLGS  A FLLK VTGGLAVPTH+            MEIIITF LVYTVYATAADPKKGSLGTIAP+AIG IVGANI AAGPFSGG
Sbjct:    4 VAFGSFDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGG 194
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 9.972e-77
Identity = 147/191 (76.96%), Postives = 159/191 (83.25%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            IAFG   DSFS+GS KAY+AEFI+TLLFVFA VGSAIA+NK+TADAALDP+GLVA+A+ H FALFV V+I ANISGGH+NPAVT GLA+GG ITILTG FYWIAQLLGS VA  LLK VT GLAVPTH             MEIIITF LVYTVYATAADPKKGSLGTIAP+AIGFIVGANI AAGPFSGG
Sbjct:    4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGG 194
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 9.972e-77
Identity = 147/191 (76.96%), Postives = 159/191 (83.25%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            IAFG   DSFS+GS KAY+AEFI+TLLFVFA VGSAIA+NK+TADAALDP+GLVA+A+ H FALFV V+I ANISGGH+NPAVT GLA+GG ITILTG FYWIAQLLGS VA  LLK VT GLAVPTH             MEIIITF LVYTVYATAADPKKGSLGTIAP+AIGFIVGANI AAGPFSGG
Sbjct:    4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGG 194
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.881e-75
Identity = 145/191 (75.92%), Postives = 161/191 (84.29%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            IAFGRFDDSFS  S KAY+AEFISTL+FVFA VGSAIA+ K+T  A LDP+GLVA+A+CHGF LFVAVAIGANISGGHVNPAVTFGLALGGQITILTG+FYWIAQLLG++V + L++  T G+A PTH             MEII+TFGLVYTVYATAADPKKGSLGTIAP+AIGFIVGANI  AGPFSGG
Sbjct:    5 IAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHG-LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGG 193
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.050e-74
Identity = 140/191 (73.30%), Postives = 157/191 (82.20%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            IAFG   DSFS+ S KAY+AEFI+TLLFVFA VGSAIA+NK+T+DAALDP+GLVA+A+ H FALFV V++ AN+SGGH+NPAVT GLA+GG ITILTG+FYWIAQ LGS VA  LLK VT GL+VPTH             MEIIITF LVYTVYATAADPKKGSLG IAP+AIGFIVGANI AAGPFSGG
Sbjct:    4 IAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGG 194
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.068e-70
Identity = 134/191 (70.16%), Postives = 153/191 (80.10%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            I  G   DSFS+ S KAYL+EFI+TLLFVFA VGSA+AF K+T+DAALDP+GLVA+A+ H FALFV V+I ANISGGH+NPAVT GLA+GG IT++TG FYWIAQ LGS+VA  LL  VT G +VPTH             MEI++TF LVYTVYATAADPKKGSLGTIAP+AIGFIVGANI AAGPFSGG
Sbjct:    4 IEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGG 194
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.395e-70
Identity = 135/191 (70.68%), Postives = 152/191 (79.58%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            I  G   DSFS+ S KAYL+EFI+TLLFVFA VGSA+AF K+T+D ALDP+GLVAIAI H FALFV V+I ANISGGH+NPAVT GLA+GG IT++TG FYWIAQ LGS+VA  LL  VT G +VPTH             MEI++TF LVYTVYATAADPKKGSLGTIAP+AIGFIVGANI AAGPFSGG
Sbjct:    4 IEVGSVGDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGG 194
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 6.922e-70
Identity = 137/191 (71.73%), Postives = 155/191 (81.15%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            +AFG F DS S  S KAY+AEFI+TLLFVFA VGSAIA++++T   ALDP+GLVAIAI H FALFV V++ ANISGGH+NPAVTFGLA+GG ITILTGI YW+AQLLG+ VA FLL+ VT G A+PTH             MEI+ITF LVYTVYATAADPKKGSLGTIAP+AIGFIVGANI AAGPFSGG
Sbjct:    4 LAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHG-VSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGG 193
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.542e-69
Identity = 132/191 (69.11%), Postives = 152/191 (79.58%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            +AFG   DSFS+ S KAY+AEFI+TLLFVFA VGSAIAF ++T   ALDP+GLVAIA+ H  ALFV V++ AN SGGH+NPAVTFGLA+GG IT+LTG+FYW+AQLLG+ VA  LL+ VT G A+PTH              EI+ITF LVYTVYATAADPKKGSLGTIAP+AIGFIVGANI AAGPFSGG
Sbjct:    4 LAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGG 194
[Close]
BLAST of CX676023 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.014e-69
Identity = 136/191 (71.20%), Postives = 153/191 (80.10%), Query Frame = 3 
Query:   75 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAVVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSLVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXMEIIITFGLVYTVYATAADPKKGSLGTIAPVAIGFIVGANIPAAGPFSGG 647
            +AFG   DSFS  S KAY+AEFI+TLLFVFA VGSAIA+ ++T   ALDP+GLVAIAI H  ALFV V++ ANISGGH+NPAVTFGLA+GG ITILTG+FYWIAQLLG+ +A  LLK VT G A+PTH             MEI+ITF LVYTVYATAADPKKGSLGTIAP+AIGFIVGANI AAGPFSGG
Sbjct:    4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHG-VAGISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGG 193
The following BLAST results are available for this feature:
BLAST of CX676023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
TIP21_ARATH8.716e-8180.10Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP2_TOBAC9.972e-7776.96Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC9.972e-7776.96Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
TIP22_ORYSJ1.881e-7575.92Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP_ANTMA6.050e-7473.30Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP22_ARATH1.068e-7070.16Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP23_ARATH1.395e-7070.68Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP23_MAIZE6.922e-7071.73Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP22_MAIZE1.542e-6969.11Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP21_ORYSJ2.014e-6971.20Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_66E03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66E03-J6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676023 ID=CX676023; Name=CX676023; organism=Citrus sinensis; type=EST; length=647bp
TTCTTCTTCTTAAGAAAGACTCGAGAGAGTTTTTTTTTCCCTATTCTCTA
GCTCTTTCTTGATCAACAATGGCTATTGCCTTCGGCCGCTTCGATGATTC
TTTCAGCTTAGGCTCCTTCAAGGCCTATCTTGCTGAGTTTATCTCAACTT
TGCTCTTTGTTTTCGCCGTCGTTGGCTCGGCCATTGCTTTCAACAAGATG
ACAGCAGATGCAGCACTTGATCCATCAGGGCTAGTAGCCATCGCTATTTG
CCATGGATTTGCTCTATTTGTCGCAGTTGCAATTGGTGCTAACATCTCAG
GTGGCCACGTCAACCCAGCCGTCACCTTTGGATTGGCTCTTGGTGGCCAA
ATCACCATCCTCACTGGCATCTTCTACTGGATTGCCCAACTTCTTGGCTC
TCTTGTTGCCAGCTTCCTCCTCAAAGTTGTCACTGGAGGCTTGGCAGTTC
CTACCCACAATGTTGCTGCTGGAGTTGGAGCCGTTGAAGGAGTTGTGATG
GAGATCATCATCACATTTGGTTTGGTCTACACGGTCTATGCCACGGCAGC
TGACCCCAAGAAGGGATCATTGGGCACCATTGCACCCGTTGCCATCGGTT
TCATTGTCGGTGCCAACATCCCGGCCGCCGGCCCATTCTCCGGTGGT
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