CX676021

Overview
NameCX676021
Unique NameCX676021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.623e-36
Identity = 94/265 (35.47%), Postives = 145/265 (54.72%), Query Frame = -1
Query:    9 EKEWQNILENEIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVDDCQNL 803
            E EW+++ ++EIW L   E  +L  L LSY+ LP  +++CF+YCAVFPKD  I K  LI LWMA  +L  KG  E+ED+G E +N L  RSFFQ+  +   G+ Y  KMHD++HD A  + S    +  I       I+   ++ ++ +                 VT  + + S+       S+S    P LF++   LR L L        N+  +++P+++  L+HL+YL+L G  KI  LP+ LC+L NL+ L++ +CQ+L
Sbjct:  366 ESEWEHVRDSEIWNLPQDENSVLPALRLSYHHLPLDLRQCFAYCAVFPKDTKIEKEYLIALWMAHSFLLSKGNMELEDVGNEVWNELYLRSFFQEI-EVKSGKTY-FKMHDLIHDLATSMFSASASSRSIRQ-----INVKDDEDMMFI-----------------VTNYKDMMSIGFSEVVSSYS----PSLFKRFVSLRVLNLS-------NSEFEQLPSSVGDLVHLRYLDLSG-NKICSLPKRLCKLQNLQTLDLYNCQSL 594          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.636e-35
Identity = 91/272 (33.46%), Postives = 134/272 (49.26%), Query Frame = -1
Query:    9 EKEWQNILENEIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWS-------SEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVDDCQNL 803
            E+EW+++ ++ IW L   E  +L  L LSY+ LP  +++CF YCAVFPKD  + K  LI  WMA G+L  KG  E+ED+G E +N L  RSFFQ+  + + G+ Y  KMHD++HD A                                            S++   T    +R +    D Y  S       S   P L +K   LR L L       RN+ + ++P++I  L+HL+YL+L G  +I  LP+ LC+L NL+ L++  C +L
Sbjct:  366 EREWEHVRDSPIWNLPQDESSILPALRLSYHHLPLDLRQCFVYCAVFPKDTKMAKENLIAFWMAHGFLLSKGNLELEDVGNEVWNELYLRSFFQEI-EVESGKTY-FKMHDLIHDLA-------------------------------------------TSLFSANTSSSNIREINANYDGYMMSIGFAEVVSSYSPSLLQKFVSLRVLNL-------RNSNLNQLPSSIGDLVHLRYLDLSGNFRIRNLPKRLCKLQNLQTLDLHYCDSL 585          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.263e-34
Identity = 92/265 (34.72%), Postives = 134/265 (50.57%), Query Frame = -1
Query:    9 EKEWQNILENEIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVDDCQNL 803
            E EW+++ +NEIW L   E  +L  L LSY+ LP  +++CF+YCAVFPKD  + K  LI LWMA G+L  KG  E+ED+G E +N L  RSFFQ+  +   G  Y  K+HD++HD A  L S       I    E+ +  +          T+  G +  +S +                          P L +K   LR L L   +       ++++P++I  LLHL+YL+L        LPE LC+L NL+ L+V +C +L
Sbjct:  368 ESEWEHVRDNEIWSLPQDESSILPALRLSYHHLPLDLRQCFAYCAVFPKDTKMIKENLITLWMAHGFLLSKGNLELEDVGNEVWNELYLRSFFQEI-EAKSGNTY-FKIHDLIHDLATSLFSASASCGNI---REINVKDYKH--------TVSIGFAAVVSSYS-------------------------PSLLKKFVSLRVLNLSYSK-------LEQLPSSIGDLLHLRYLDL-SCNNFRSLPERLCKLQNLQTLDVHNCYSL 586          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.819e-33
Identity = 91/270 (33.70%), Postives = 132/270 (48.89%), Query Frame = -1
Query:    9 EKEWQNILENEIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYL-----CSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVDDCQNL 803
            E+ W+++ ++ IW L   E  +L  L LSY++LP  +K+CF+YCAVFPKD  + K KLI LWMA G+L  KG  E+ED+G+E +  L  RSFFQ+  +  DG+ Y  KMHD++HD A  L      S+    +  HS   +    F E    + L  L                                         EK   LR L L        ++   ++P++I  L+HL+YLNL G   +  LP+ LC+L NL+ L++  C  L
Sbjct:  367 ERAWEHVRDSPIWNLPQDESSILPALRLSYHQLPLDLKQCFAYCAVFPKDAKMEKEKLISLWMAHGFLLSKGNMELEDVGDEVWKELYLRSFFQEI-EVKDGKTY-FKMHDLIHDLATSLFSANTSSSNIREINKHSYTHMMSIGFAEVVFFYTLPPL-----------------------------------------EKFISLRVLNL-------GDSTFNKLPSSIGDLVHLRYLNLYG-SGMRSLPKQLCKLQNLQTLDLQYCTKL 585          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.483e-28
Identity = 86/271 (31.73%), Postives = 143/271 (52.77%), Query Frame = -1
Query:    3 EWQNILENEIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSE-KGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQ-----LFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVDDCQNLRE 797
            EW+ +L + IW+L A +  LL  L +SY  LP+ +KRCF+YC++FPK +   K K++ LWMA+G+L + + +K +E++G EYF+ L SRS  Q           +  MHD +++ AQ+       + +   G +L +S     +    L  LR   + P+  +  +  ++ LR+ L  S   S  S  L Q     L   LT LR L L          + +  P   + + H ++L+L  + ++EKLP++LC +YNL+ L +  C +L+E
Sbjct:  392 EWERVLSSRIWDLPADKSNLLPVLRVSYYYLPAHLKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTKT-------RYIMHDFINELAQFASGE--FSSKFEDGCKLQVS-----ERTRYLSYLRDNYAEPME-FEALREVKFLRTFLPLSLTNSSRSCCLDQMVSEKLLPTLTRLRVLSLS------HYKIARLPPDFFKNISHARFLDL-SRTELEKLPKSLCYMYNLQTLLLSYCSSLKE 640          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: RPM1_ARATH (Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.110e-21
Identity = 78/262 (29.77%), Postives = 128/262 (48.85%), Query Frame = -1
Query:   30 EKEWQNILENEIWELEAIE--KGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNE--CLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLN 803
            E EW+ +     WEL      K + + + LS+N+LP  +KRCF YC++FP +Y +++ +LI +WMAQ ++      + E++ + Y N L  R+  Q       G     KMHD++ + A  +   E  C      S  + A  +       HL +   +    P SI         L SLLV S     S++   +L   L  LRAL+L+       ++ I ++P  +  + +LKYLNL  + ++++LP+   +L NLE LN
Sbjct:  393 ESEWKKVYSTLNWELNNNHELKIVRSIMFLSFNDLPYPLKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVEPIRGVKAEEVADSYLNELVYRNMLQVILWNPFGRPKAFKMHDVIWEIALSVSKLERFCDVYNDDSDGDDAAETMENYGSRHLCI---QKEMTPDSIRAT-----NLHSLLVCS-----SAKHKMELLPSLNLLRALDLE-------DSSISKLPDCLVTMFNLKYLNL-SKTQVKELPKNFHKLVNLETLN 633          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.110e-21
Identity = 76/269 (28.25%), Postives = 135/269 (50.19%), Query Frame = -1
Query:    9 EWQNILENEIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSE-KGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSS-----EVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVDDCQNL 797
            +W  + +N      +    +L  L LSY+ LP ++KRCF+ C++FPK +   + +L+ LWMA   L + + ++ +EDIG +Y   L ++SFFQ      D  +    MHD+++D A+ +  + C  +E  +  E+  ++           +  R        + ++ G   LR++L  +   S  S     +VL  L   L+ LR L L        +  I  +P +++ L  L+YL+L    KI++LPE +C L NL+ L + +C++L
Sbjct:  388 DWYAVSKN----FSSYTNSILPVLKLSYDSLPPQLKRCFALCSIFPKGHVFDREELVLLWMAIDLLYQPRSSRRLEDIGNDYLGDLVAQSFFQRL----DITMTSFVMHDLMNDLAKAVSGDFCFRLEDDNIPEIPSTT--------RHFSFSRSQCDASVAFRSICGAEFLRTILPFNSPTSLESLQLTEKVLNPLLNALSGLRILSLS-------HYQITNLPKSLKGLKLLRYLDL-SSTKIKELPEFVCTLCNLQTLLLSNCRDL 632          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: DRL37_ARATH (Probable disease resistance protein At5g47250 OS=Arabidopsis thaliana GN=At5g47250 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.246e-19
Identity = 79/270 (29.26%), Postives = 128/270 (47.41%), Query Frame = -1
Query:    6 LENEIWELEAIEKGLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEK-GAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGN----------VTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVDDCQNLR 782
            LE+   E++  EKG+   L LSY+ L +K  +CF YCA+FPK Y I++ +L+E W+ +G++ EK G +  +D G E  + L       + NK       K  MHD++ D A ++ S      E   GE   + +  +  +  L           +S++ N                L +L ++++      +++ + F  ++ L  L+L    SW  N  I E+P  I  L+ L+ LNL G   I+ LPE L  L  L  LN++   NLR
Sbjct:  375 LESYRSEMKGTEKGIFQVLKLSYDYLKTKNAKCFLYCALFPKAYYIKQDELVEYWIGEGFIDEKDGRERAKDRGYEIIDNLVGAGLLLESNK-------KVYMHDMIRDMALWIVS------EFRDGERYVVKT--DAGLSQLPDVTDWTTVTKMSLFNNEIKNIPDDPEFPDQTNLVTLFLQNNRL---VDIVGKFFLVMSTLVVLDL----SW--NFQITELPKGISALVSLRLLNLSG-TSIKHLPEGLGVLSKLIHLNLESTSNLR 619          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: R13L4_ARATH (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.972e-17
Identity = 69/269 (25.65%), Postives = 123/269 (45.72%), Query Frame = -1
Query:    3 EWQNILENEIWELEAIEK---GLLAPLLLSYNELPSKVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEIYKCKMHDIVHDFAQYLCSNECLA-VEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVDDCQNLRE 797
            EW+ I E+   EL         +++ L LSY+ELPS +K C    +++P+D  I K +L+  W+ +G++  +  +   + GE+ F+ L +R   +  +K   G I  CK+HD+V D    +   +  +  E  +   L IS   ++K + +   LR   S                    K+ E +  +  L + F     LR L++        +  + EI   I  L HL  L+L     + + P ++ +L+NL+ L+   CQNL++
Sbjct:  378 EWRRIAEHFQDELRGNTSETDNVMSSLQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESGEDCFSGLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSFSNPEGLNCRHLGISGNFDEKQIKVNHKLRGVVST------------------TKTGEVNKLNSDLAKKFTDCKYLRVLDISKSIF---DAPLSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQNLKQ 625          
BLAST of CX676021 vs. ExPASy Swiss-Prot
Match: DRL3_ARATH (Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.701e-16
Identity = 79/271 (29.15%), Postives = 134/271 (49.45%), Query Frame = -1
Query:   24 TEKEWQNI---LENEIWELEAIEKGLLAPLLLSYNELPS-KVKRCFSYCAVFPKDYGIRKHKLIELWMAQGYLSEKGAKEMEDIGEEYFNILASRSFFQDFNKYDDGEI-YKCKMHDIVHDFAQYLCSN-----ECLAVEIHSGEELAISSFVEKKILHLLLTLRRGASVPISIWGNVTGLRGLRSLLVKSDEYSWSSEVLPQLFEKLTCLRALELQVRESWPRNNLIKEIPTNIEKLLHLKYLNLKGQKKIEKLPETLCELYNLERLNVD 806
            T +EWQ++   L +   E  ++E+ +L  L  SY++L   KVK CF YC++FP+DY +RK +LIE WM +G++   G ++ +    +  +I+ S       +   DGE+  K KMHD++ + A ++ SN     E L V+   G +L     + K I    L         I+   + +    L +LL+++++      +    F  +  L  L+L       RN+ +  +P  I KL  L+Y+NL     I+ LP +  EL  L  LN++
Sbjct:  434 TVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDLKDEKVKLCFLYCSLFPEDYEVRKEELIEYWMCEGFID--GNEDEDGANNKGHDIIGS---LVRAHLLMDGELTTKVKMHDVIREMALWIASNFGKQKETLCVK--PGVQLC---HIPKDINWESLRRMSLMCNQIANISSSSNSPNLSTLLLQNNKL---VHISCDFFRFMPALVVLDLS------RNSSLSSLPEAISKLGSLQYINL-STTGIKWLPVSFKELKKLIHLNLE 684          
The following BLAST results are available for this feature:
BLAST of CX676021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
RGA3_SOLBU5.623e-3635.47Putative disease resistance protein RGA3 OS=Solanu... [more]
RGA1_SOLBU1.636e-3533.46Putative disease resistance protein RGA1 OS=Solanu... [more]
RGA4_SOLBU5.263e-3434.72Putative disease resistance protein RGA4 OS=Solanu... [more]
RGA2_SOLBU5.819e-3333.70Disease resistance protein RGA2 OS=Solanum bulboca... [more]
R13L1_ARATH1.483e-2831.73Putative disease resistance RPP13-like protein 1 O... [more]
RPM1_ARATH5.110e-2129.77Disease resistance protein RPM1 OS=Arabidopsis tha... [more]
DRL21_ARATH5.110e-2128.25Putative disease resistance protein At3g14460 OS=A... [more]
DRL37_ARATH6.246e-1929.26Probable disease resistance protein At5g47250 OS=A... [more]
R13L4_ARATH9.972e-1725.65Disease resistance RPP13-like protein 4 OS=Arabido... [more]
DRL3_ARATH1.701e-1629.15Probable disease resistance protein At1g15890 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_66E02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66E02-J4-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676021 ID=CX676021; Name=CX676021; organism=Citrus sinensis; type=EST; length=806bp
AATTCTCTAAGATTTTGACAATCATCAACGTTTAAACGTTCTAAATTATA
TAACTCACACAACGTCTCGGGTAATTTTTCTATCTTCTTTTGACCTTTCA
AATTAAGGTATTTCAAATGTAACAATTTTTCTATATTTGTTGGAATTTCC
TTGATTAAATTGTTACGCGGCCACGATTCACGCACCTGTAATTCTAATGC
CCTTAAACAAGTTAATTTTTCAAATAATTGAGGTAGAACTTCACTAGACC
ATGAATATTCATCACTTTTAACTAAGAGGCTCCGCAATCCTCGCAATCCT
GTAACATTACCCCAAATGGAAATCGGAACCGAAGCCCCCCTACGTAGAGT
TAACAGTAAATGAAGGATTTTTTTCTCCACGAAAGAGCTAATAGCTAACT
CTTCACCACTATGAATTTCTACTGCTAAACATTCATTACTACATAAATAT
TGGGCAAAGTCGTGCACTATATCATGCATTTTGCACTTATAGATTTCACC
ATCATCATATTTGTTAAAATCCTGAAAGAATGAACGGCTAGCTAAGATGT
TGAAATACTCTTCACCAATATCCTCCATCTCTTTGGCTCCTTTCTCACTA
AGATAACCTTGTGCCATCCATAGTTCAATTAACTTATGCTTCCGTATTCC
ATAGTCTTTCGGAAAGACGGCACAATATGAGAAACAACGCTTTACCTTGG
AGGGTAATTCATTGTAACTCAACAATAGAGGGGCTAAAAGGCCTTTCTCA
ATTGCTTCTAGTTCCCATATCTCATTCTCTAAGATATTTTGCCATTCTTT
TTCAGT
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