CN189177

Overview
NameCN189177
Unique NameCN189177
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length179
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN189177 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.762e-12
Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 1 
Query:   52 WAWKILNWAWLKPKRVEKLLRKQGFKGNSYRFLFGDVRE 168
            WAW++L+WAW  PKR+EK LR+QGF+GN YRFL GDV+E
Sbjct:   23 WAWRVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKE 61
The following BLAST results are available for this feature:
BLAST of CN189177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C72A1_CATRO1.762e-1269.23Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0001H01_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189177 ID=CN189177; Name=CN189177; organism=Citrus sinensis; type=EST; length=179bp
ATTCTCNNCNAANTCATANCATTTTCCATTGTCACTATAACAGTGGTAAC
ATGGGCATGGAAAATTCTGAACTGGGCATGGCTGAAGCCNAAGAGAGTGG
AGAAACTTCTAAGAAAGCAAGGTTTTAAAGGCAATTCCTACAGGTTTCTG
TTCGGAGATGTGAGGGAACNCNCCGTGTT
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