CN189174

Overview
NameCN189174
Unique NameCN189174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length747
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2713 contig Csv1_Contig2713:1..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PPP7_ARATH (Serine/threonine-protein phosphatase 7 OS=Arabidopsis thaliana GN=PP7 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.580e-58
Identity = 104/148 (70.27%), Postives = 123/148 (83.11%), Query Frame = 2
Query:  302 PISYPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKNCTSVY 745
            PI++P+ G LT +W+  L   F+WSS NLPPS+ PS+ PV+VFD+LVLTA KILHKE NCV IDD D  S VVVVGD+HGQLHD+LFLL+D GFP +N  +VFNGDYVDRGAWGLETFL+LL+WKV +P RVYLLRGNHESK CTS+Y
Sbjct:    8 PITWPDGGALTNDWVHGLMSCFEWSSWNLPPSQLPSLLPVNVFDSLVLTAHKILHKERNCVHIDDLDSVSNVVVVGDIHGQLHDLLFLLKDTGFPCQNRCYVFNGDYVDRGAWGLETFLVLLSWKVLMPDRVYLLRGNHESKYCTSMY 155          
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PPP7L_ARATH (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana GN=At1g48120 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.595e-53
Identity = 99/154 (64.29%), Postives = 122/154 (79.22%), Query Frame = 2
Query:  284 SAPVQIPISYPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKNCTSVY 745
            S+  Q P+ +P  G LT  W+ ++ L FDWSS+NLPP EF SV P +V D LVL ASKIL KEPNCV ID   + + VVVVGD+HGQLHD+L+L++DAGFP  + F+VFNG+YVD GAWGLETFLLLL+WKV LP RVYLLRG+HES++CTS+Y
Sbjct:  580 SSVSQKPLFWPSGGKLTFSWVCEVMLVFDWSSKNLPPCEFSSVLPFNVLDELVLFASKILKKEPNCVRIDS--EKAEVVVVGDLHGQLHDLLYLMQDAGFPDGDRFYVFNGNYVDIGAWGLETFLLLLSWKVLLPARVYLLRGSHESESCTSMY 731          
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PPP7I_ARATH (Serine/threonine-protein phosphatase 7 inactive homolog OS=Arabidopsis thaliana GN=At5g10900 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.544e-34
Identity = 71/142 (50.00%), Postives = 98/142 (69.01%), Query Frame = 2
Query:  302 PISYPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 727
            PIS+P +  LT+EW++ L    + S+     SEF  + P  V  +LV  AS+IL KE NCV I+   +DSRV+VVGD+HGQLHD+L +   +G PS+N  FVFNG+Y+ RG+W LE FL+LLAWK+ +P  V LLRG+ E++
Sbjct:  154 PISWPLESQLTLEWVETLMGLLNQSTWKNSVSEFSLILPHSVAVSLVDCASQILEKEANCVKINGCSEDSRVIVVGDLHGQLHDLLKIFDQSGRPSQNQCFVFNGNYIGRGSWSLEVFLVLLAWKIMMPENVILLRGSSETR 295          
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEBR (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis briggsae GN=pph-4.1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.933e-18
Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 2
Query:  434 TLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKNCTSVY 745
            TL   A +IL +E N  VID     S V + GD+HGQ +D++ L R  G P  N  ++F GD+VDRG + +ETFLLLLA K   P R+ L+RGNHES+  T VY
Sbjct:   52 TLCAKAREILAEEGNVQVID-----SPVTICGDIHGQFYDLMELFRVGG-PVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVY 149          
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis elegans GN=pph-4.1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.767e-17
Identity = 50/104 (48.08%), Postives = 66/104 (63.46%), Query Frame = 2
Query:  434 TLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKNCTSVY 745
            TL   A +IL +E N  VID     S V + GD+HGQ +D++ L +  G P  N  ++F GD+VDRG + +ETFLLLLA K   P R+ L+RGNHES+  T VY
Sbjct:   52 TLCAKAREILAEEGNVQVID-----SPVTICGDIHGQFYDLMELFKVGG-PVPNTNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVY 149          
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PP4C_KLULA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Kluyveromyces lactis GN=PPH3 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.142e-17
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 2
Query:  422 DVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKNCTSVY 745
            D   +L + A ++L  E N   +D     + V + GD+HGQLHD+L L   +G   KN + +F GD+VDRG + LE+FLLL+ +K+  P R+ L+RGNHE++  T VY
Sbjct:   20 DSIYSLCVMAQELLMNESNVTHVD-----TPVTICGDIHGQLHDLLTLFAKSGGIEKNRY-IFLGDFVDRGFYSLESFLLLVCYKLRYPDRIVLIRGNHETRQITKVY 121          
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PP4C_YEAST (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Saccharomyces cerevisiae GN=PPH3 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.715e-17
Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = 2
Query:  416 PVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKNCTSVY 745
            P +    L L + ++L  E N   +D     + V + GD+HGQLHD+L L   +G   K  + +F GD+VDRG + LE+FLLLL +K+  P R+ L+RGNHE++  T VY
Sbjct:   18 PEETVFRLCLNSQELLMNEGNVTQVD-----TPVTICGDIHGQLHDLLTLFEKSGGVEKTRY-IFLGDFVDRGFYSLESFLLLLCYKLRYPDRITLIRGNHETRQITKVY 121          
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PP4C_CANGA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Candida glabrata GN=PPH3 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.771e-17
Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = 2
Query:  416 PVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKNCTSVY 745
            P +    L + + ++L  E N   +D     + V + GD+HGQLHD+L L   +G   K  + VF GD+VDRG + LE+FLLLL +K+  P R+ L+RGNHE++  T VY
Sbjct:   19 PEETVYALCMDSQELLMNESNVARVD-----TPVTICGDIHGQLHDLLTLFEKSGGVEKTRY-VFLGDFVDRGFYSLESFLLLLVYKLRYPDRITLIRGNHETRQITKVY 122          
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PP4C_ASHGO (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Ashbya gossypii GN=PPH3 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 2
Query:  416 PVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKNCTSVY 745
            P +    L L   ++L  E N   +D     + V + GD+HGQLHD+L L   +    KN F +F GD+VDRG + LE+FLLLL +K+  P R+ L+RGNHE++  T VY
Sbjct:   20 PEETIYELCLKCQELLVNESNVTHVD-----TPVTICGDIHGQLHDLLTLFEKSEGIEKNRF-IFLGDFVDRGFYSLESFLLLLCYKLRYPDRITLIRGNHETRQITKVY 123          
BLAST of CN189174 vs. ExPASy Swiss-Prot
Match: PP4C_DROME (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Drosophila melanogaster GN=Pp4-19C PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.685e-16
Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 2
Query:  437 LVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKNCTSVY 745
            L   A +IL +E N   +D     S V V GD+HGQ +D+  L +  G  P KN  ++F GD+VDRG + +ETFLLLLA KV  P R+ L+RGNHES+  T VY
Sbjct:   28 LCAKAREILVEEGNVQRVD-----SPVTVCGDIHGQFYDLKELFKVGGDVPEKN--YLFMGDFVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVY 124          
The following BLAST results are available for this feature:
BLAST of CN189174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
PPP7_ARATH1.580e-5870.27Serine/threonine-protein phosphatase 7 OS=Arabidop... [more]
PPP7L_ARATH7.595e-5364.29Serine/threonine-protein phosphatase 7 long form h... [more]
PPP7I_ARATH3.544e-3450.00Serine/threonine-protein phosphatase 7 inactive ho... [more]
PP4C1_CAEBR7.933e-1849.04Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C1_CAEEL1.767e-1748.08Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_KLULA5.142e-1742.59Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_YEAST6.715e-1741.82Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_CANGA8.771e-1741.82Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_ASHGO1.145e-1642.73Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_DROME5.685e-1648.08Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001G23_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189174 ID=CN189174; Name=CN189174; organism=Citrus sinensis; type=EST; length=747bp
GACGATTTCTTGTCAATTTCTGGTCACTCTTTTTTGGTTACTGCTTGTAG
ATTTCTTTAAGTCTTAGACATGTAAGTAAAGTAAACTCAAATTCTGTAGA
TTGATTTGTGTTTTTATTTGGTTGTATTTATGTTGTAGAAACTAAGGGGA
AAATAAAAATAAAATGCCAAATAAAAAGGAGTCGGACACCACCGTTTCTT
CTCTTCCATCAGATGAATCCAACCCCACCATTTCATCCACCATTGCCTCT
ACTGAGTACTCTAAAGGAAATAAACCTCTATCATCAGCACCGGTTCAGAT
CCCAATCTCATATCCTGAAGATGGGATGCTCACAGTTGAATGGATCCAAG
ATCTTACGTTGACTTTCGACTGGTCTTCCAGAAATCTTCCACCCTCCGAG
TTTCCTTCTGTGTTTCCTGTTGATGTATTTGACACTTTGGTGTTGACTGC
TTCCAAGATCCTTCATAAAGAGCCCAATTGTGTCGTAATTGATGACTTTG
ACCAGGATTCAAGAGTTGTAGTGGTTGGAGACGTGCATGGGCAGTTGCAC
GACGTTCTTTTTCTCTTGAGAGATGCTGGATTTCCTTCTAAAAACTGCTT
CTTTGTCTTTAATGGAGATTACGTTGATAGAGGAGCTTGGGGTCTTGAAA
CCTTCTTGCTTTTACTAGCATGGAAAGTCTTTTTGCCACACAGAGTATAT
CTGCTTCGCGGGAATCATGAATCTAAGAATTGTACGTCTGTTTATGG
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