CX676018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: YGL4_SCHPO (Uncharacterized protein C216.04c OS=Schizosaccharomyces pombe GN=SPBC216.04c PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.721e-25 Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = -2 Query: 186 GTGEYNKLYA-DGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG--RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 470 G G + + G + CA C LYK+ TKF+S CGWPAF++ LPG + R D R E CA CGGHLGH+FKGEG+ PTDERHC+NS S++F Sbjct: 33 GAGRFTHQFPKQGVFVCAACKELLYKASTKFESHCGWPAFFDNLPGKVKRIEDNSYGMHRVEAVCANCGGHLGHIFKGEGYSNPTDERHCINSASLEF 130
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_LEIXX (Peptide methionine sulfoxide reductase msrB OS=Leifsonia xyli subsp. xyli GN=msrB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.651e-22 Identity = 53/101 (52.48%), Postives = 66/101 (65.35%), Query Frame = -2 Query: 174 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDP--DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 467 TGE G Y CA CG L++S TKFDSGCGWP+FYE + P A+ D RTE+ CA CG HLGHVF +GF+TPT +R+C+NS+S+ F P D Sbjct: 39 TGELLDESRAGVYACAACGAELFRSGTKFDSGCGWPSFYESVRPEAVELLEDTRLGITRTEVRCANCGSHLGHVFP-DGFRTPTGDRYCMNSISLDFQPED 138
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: YCD3_YEAST (Uncharacterized protein YCL033C OS=Saccharomyces cerevisiae GN=YCL033C PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.192e-22 Identity = 54/99 (54.55%), Postives = 60/99 (60.61%), Query Frame = -2 Query: 192 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPDPD--GRRTEITCAACGGHLGHVFKGEGFK----TPTDERHCVNSVSI 467 TG Y G Y+CA C LY S KFD+ CGWPAFYE + PGAI D R EI CA CGGHLGHVF+GEG+K P D RHCVNS S+ Sbjct: 65 TGAYLHTNESGVYHCANCDRPLYSSKAKFDARCGWPAFYEEVSPGAITYHRDNSLMPARVEICCARCGGHLGHVFEGEGWKQLLNLPKDTRHCVNSASL 163
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_METTH (Peptide methionine sulfoxide reductase msrB OS=Methanobacterium thermoautotrophicum GN=msrB PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.491e-19 Identity = 47/104 (45.19%), Postives = 62/104 (59.62%), Query Frame = -2 Query: 174 PRGTGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPG---AINRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 476 P TG+Y+ L+ DG Y C CGT L+ S TKFDSG GWP+FY+ + + R E+ CA C HLGHVF + PT +R+C+NS ++KFIP D Sbjct: 47 PPFTGKYHDLHDDGIYRCICCGTDLFDSETKFDSGTGWPSFYDVVSEHNIKLREDRSLGMVRCEVLCARCDAHLGHVF--DDGPRPTGKRYCMNSAALKFIPRD 148
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_DROME (Methionine-R-sulfoxide reductase B1 OS=Drosophila melanogaster GN=SelR PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.446e-18 Identity = 51/118 (43.22%), Postives = 63/118 (53.39%), Query Frame = -2 Query: 159 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGL-PGAINRSPD--------------PDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGDAPASS 467 TG YNK Y G Y C C L+ S TK+DSGCGWPAF + L G + D P+ RTE+ CA C H+GHVF E PT +R+C+NS SI+F+ D SS Sbjct: 79 TGCYNKHYEKGVYQCIVCHQDLFSSETKYDSGCGWPAFNDVLDKGKVTLHRDASIPGGNILLLIAHPERIRTEVRCARCNAHMGHVF--EDGPKPTRKRYCINSASIEFVNADPATSS 194
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_VARPS (Peptide methionine sulfoxide reductase msrB OS=Variovorax paradoxus (strain S110) GN=msrB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.207e-18 Identity = 48/97 (49.48%), Postives = 59/97 (60.82%), Query Frame = -2 Query: 186 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAF-YEGLPGAINRSPDPDGR--RTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKF 467 TG+Y + DG Y+C CG L++S TKFD+GCGWP+F E +PGAI D RTE CA CG HLGHVF T T R+C+NS S+ F Sbjct: 39 TGKYEAHWDDGTYHCICCGAKLFESSTKFDAGCGWPSFSQEAVPGAIRNIVDRSHGMVRTENVCANCGAHLGHVFPDG--PTETGLRYCMNSASLDF 133
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_PSEP1 (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=msrB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.495e-18 Identity = 46/101 (45.54%), Postives = 58/101 (57.43%), Query Frame = -2 Query: 174 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAIN---RSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGD 467 +G+YN DG Y+C CG AL+ + TKFD+GCGWP+FY + + R RTE+TCA C HLGHVF PT R+C+NSV I P D Sbjct: 33 SGKYNSERRDGIYHCICCGLALFDAQTKFDAGCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDG--PPPTGLRYCINSVCIDLRPRD 131
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB3_MOUSE (Methionine-R-sulfoxide reductase B3, mitochondrial OS=Mus musculus GN=Msrb3 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.495e-18 Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = -2 Query: 171 GEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAINRSPDPDG---RRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIPGDA 464 GEY G Y C CGT L+KS TKFDSG GWPAF++ + D R E +C+ CG HLGH+F + PT +R+C+NS S+ F P D+ Sbjct: 66 GEYTHHKDPGIYKCVVCGTPLFKSETKFDSGSGWPAFHDVISSEAIEFTDDFSYGMHRVETSCSQCGAHLGHIF--DDGPRPTGKRYCINSASLSFTPADS 164
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_PSESM (Peptide methionine sulfoxide reductase msrB OS=Pseudomonas syringae pv. tomato GN=msrB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.177e-18 Identity = 45/99 (45.45%), Postives = 57/99 (57.58%), Query Frame = -2 Query: 180 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAFYEGLPGAI---NRSPDPDGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 467 +G+YN G Y+C C AL+ S TKFDSGCGWP+FY L G+ R RTE+ CA C HLGHVF PT R+C+NSV ++ +P Sbjct: 33 SGKYNDTKTAGVYHCICCNEALFDSTTKFDSGCGWPSFYAPLEGSAVVEVRDVSHGMIRTEVVCARCDAHLGHVFPDG--PPPTGLRYCINSVCLELVP 129
BLAST of CX676018 vs. ExPASy Swiss-Prot
Match: MSRB_POLNA (Peptide methionine sulfoxide reductase msrB OS=Polaromonas naphthalenivorans (strain CJ2) GN=msrB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.177e-18 Identity = 49/99 (49.49%), Postives = 57/99 (57.58%), Query Frame = -2 Query: 180 TGEYNKLYADGFYNCAGCGTALYKSVTKFDSGCGWPAF-YEGLPGAINRSPDP--DGRRTEITCAACGGHLGHVFKGEGFKTPTDERHCVNSVSIKFIP 467 TG+Y YA+G Y C C L+ S TKFD+GCGWP+F E GAI D RTE CA CG HLGHVF TPT R+C+NS S+ F P Sbjct: 39 TGKYEDNYAEGTYRCICCDAELFDSSTKFDAGCGWPSFSQEVKEGAIEEHVDKAHGMTRTETVCANCGAHLGHVFPDG--PTPTGLRYCMNSASLDFKP 135 The following BLAST results are available for this feature:
BLAST of CX676018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676018 ID=CX676018; Name=CX676018; organism=Citrus sinensis; type=EST; length=825bpback to top |