CX675999

Overview
NameCX675999
Unique NameCX675999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RHO1_PEA (Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.106e-78
Identity = 141/144 (97.92%), Postives = 144/144 (100.00%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS+KWIPELKHYAPGVPIILVGTKLDLRDDKQFF+DHPGAVPI+TAQGE
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGE 144
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 2.750e-78
Identity = 140/144 (97.22%), Postives = 144/144 (100.00%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRF+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS+KWIPELKHYAPGVPI+LVGTKLDLRDDKQFFIDHPGAVPI+TAQGE
Sbjct:    1 MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGE 144
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RAC1_BETVU (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.691e-78
Identity = 140/144 (97.22%), Postives = 144/144 (100.00%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS+KWIPELKHYAPGVPI+LVGTKLDLRDDKQFFIDHPGAVPI+TAQGE
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGE 144
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RAC1_ARATH (Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana GN=ARAC1 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.691e-78
Identity = 140/144 (97.22%), Postives = 144/144 (100.00%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS+KWIPELKHYAPGVPI+LVGTKLDLRDDKQFFIDHPGAVPI+TAQGE
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGE 144
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RAC6_ARATH (Rac-like GTP-binding protein ARAC6 OS=Arabidopsis thaliana GN=ARAC6 PE=1 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 1.365e-77
Identity = 139/144 (96.53%), Postives = 143/144 (99.31%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNG+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVS+KWIPELKHYAPGVPI+LVGTKLDLRDDKQFFIDHPGAVPI+T QGE
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTVQGE 144
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RAC5_ORYSJ (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 2.328e-77
Identity = 138/144 (95.83%), Postives = 144/144 (100.00%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENVS+KWIPEL+HYAPGVPIILVGTKLDLRDDKQFF+DHPGAVPISTAQGE
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPISTAQGE 144
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RAC6_ORYSJ (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica GN=RAC6 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 5.187e-77
Identity = 137/144 (95.14%), Postives = 144/144 (100.00%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENVS+KWIPELKHYAPGVPIILVGTKLDLRDDKQFF+DHPGAVPI+TAQGE
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQGE 144
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RAC5_ARATH (Rac-like GTP-binding protein ARAC5 OS=Arabidopsis thaliana GN=ARAC5 PE=1 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 5.734e-76
Identity = 136/144 (94.44%), Postives = 143/144 (99.31%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV++KWIPEL+HYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPI+T QGE
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPITTNQGE 144
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RAC3_ARATH (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 7.489e-76
Identity = 133/144 (92.36%), Postives = 143/144 (99.31%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+G+T+NLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENVS+KW+PEL+HYAPGVPIILVGTKLDLRDDKQFF +HPGAVPISTAQGE
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKLDLRDDKQFFAEHPGAVPISTAQGE 144
[Close]
BLAST of CX675999 vs. ExPASy Swiss-Prot
Match: RAC1_LOTJA (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus GN=RAC1 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 2.846e-75
Identity = 135/144 (93.75%), Postives = 141/144 (97.92%), Query Frame = 2 
Query:  176 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSQKWIPELKHYAPGVPIILVGTKLDLRDDKQFFIDHPGAVPISTAQGE 607
            MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYEN+++KWIPEL+HYAPGVPIILVGTKLDLRDDK F  DHPGAVPI+TAQGE
Sbjct:    1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDLRDDKHFLADHPGAVPITTAQGE 144
The following BLAST results are available for this feature:
BLAST of CX675999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RHO1_PEA2.106e-7897.92Rac-like GTP-binding protein RHO1 OS=Pisum sativum... [more]
RAC11_ARATH2.750e-7897.22Rac-like GTP-binding protein ARAC11 OS=Arabidopsis... [more]
RAC1_BETVU4.691e-7897.22Rac-like GTP-binding protein RHO1 OS=Beta vulgaris... [more]
RAC1_ARATH4.691e-7897.22Rac-like GTP-binding protein ARAC1 OS=Arabidopsis ... [more]
RAC6_ARATH1.365e-7796.53Rac-like GTP-binding protein ARAC6 OS=Arabidopsis ... [more]
RAC5_ORYSJ2.328e-7795.83Rac-like GTP-binding protein 5 OS=Oryza sativa sub... [more]
RAC6_ORYSJ5.187e-7795.14Rac-like GTP-binding protein 6 OS=Oryza sativa sub... [more]
RAC5_ARATH5.734e-7694.44Rac-like GTP-binding protein ARAC5 OS=Arabidopsis ... [more]
RAC3_ARATH7.489e-7692.36Rac-like GTP-binding protein ARAC3 OS=Arabidopsis ... [more]
RAC1_LOTJA2.846e-7593.75Rac-like GTP-binding protein RAC1 OS=Lotus japonic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_66C08_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66C08-F16-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675999 ID=CX675999; Name=CX675999; organism=Citrus sinensis; type=EST; length=607bp
CGCTTAACGAACGCTTCAACGGCATTATTTCCCGGCCGAAACAAGATGAT
GGCTAATTGAAGTTACGCTTGCGATCGCGGTTCTCCTCAGGTGTTGGGAT
CTGAGGGTTGCTTGTTCTTTTCTCTGAGAGTTTATATTTTGGTAACTAAA
AAGCCACTGTCTTAAAAAAAAAAAAATGAGCGCATCAAGGTTTATTAAGT
GCGTGACGGTAGGCGATGGAGCTGTGGGTAAAACTTGTTTGCTGATTTCT
TACACCAGCAACACTTTCCCTACGGATTATGTGCCAACTGTGTTTGATAA
TTTCAGTGCAAATGTGGTTGTCAATGGGAGCACGGTTAATCTTGGATTAT
GGGATACTGCTGGACAAGAGGATTATAACAGATTAAGACCTTTAAGTTAC
CGTGGTGCAGATGTTTTCATTCTTGCATTCTCTCTTATTAGCAAAGCAAG
TTATGAAAATGTATCCCAGAAGTGGATTCCAGAGTTGAAACATTATGCAC
CTGGTGTGCCAATAATTCTTGTTGGAACAAAGCTTGATCTTCGGGATGAT
AAGCAGTTCTTCATTGATCATCCNGGTGCCGTGCCCATTAGTACAGCTCA
GGGGGAG
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