CX675989

Overview
NameCX675989
Unique NameCX675989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length816
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.762e-77
Identity = 146/218 (66.97%), Postives = 169/218 (77.52%), Query Frame = 2
Query:  176 IANMPPRRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKAT-----TTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVG 814
            +A    R Y  GRADEA HPD++RA LAEF+ST +FVFAGEGSILALDK+   T     T +P                   ++IN SGGHVNPAVTF AL+GGRISV+RAIYYW+AQL+GAI+A LLLR ATNG+RPVGF+VASGV E HGL++EI++TF LVY VY+T IDPKRGS+GI+ PLAIG IVGANILVGGPFDGASMNPARAFGPALVG
Sbjct:    1 MATSARRAYGFGRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVG 218          
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.323e-76
Identity = 145/218 (66.51%), Postives = 168/218 (77.06%), Query Frame = 2
Query:  176 IANMPPRRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKI-----SKATTTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVG 814
            +A    R Y  GRADEA HPD++RA LAEF+ST +FVFA EGSIL+LDK+     + A T +P                   ++IN SGGHVNPAVTFGAL+GGR++ +RAIYYWIAQLLGAI+A LLLR  TNGMRPVGF +ASGVG  +GLVLEI++TFGLVY VY+T+IDPKRGSLGI+ PLAIG IVGANILVGGPF GASMNPARAFGPALVG
Sbjct:    1 MATSARRAYGFGRADEATHPDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVG 218          
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 5.865e-73
Identity = 137/210 (65.24%), Postives = 161/210 (76.67%), Query Frame = 2
Query:  185 MPPRRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVG 814
            M  RRY+ GR DEA HPD+MRA+LAEF ST IFVFAGEGS LAL KI + +  S  +                 +S++ SGGHVNPAV+FGAL+GGRISV+RA+YYWIAQLLG+IVAAL+LR  TN MRP GF+V+ GVG GH  +LE+VMTFGL+YTVY T IDPKRG++  + PLAIG IVGANILVGGPFDGA MNPA AFGP+LVG
Sbjct:    1 MATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVG 210          
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.352e-69
Identity = 126/212 (59.43%), Postives = 161/212 (75.94%), Query Frame = 2
Query:  179 ANMPPRRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVG 814
            A  P RR+ +GR+++A HPDT+RAA++EF++T IFVFA EGSIL+L K+ +  +T P                    ++N SGGHVNPA+TFGALLGGR+S++RA++YW+AQLLGA+VA LLLR  T GMRP GF +ASGVG+ H ++LE  MTFGL+Y  YATVIDPKRG +G + PLA+GF++GAN+L GGPFDGA MNPAR FGPALVG
Sbjct:    5 AARPGRRFTVGRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMST-PGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVG 215          
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.138e-69
Identity = 125/209 (59.81%), Postives = 159/209 (76.08%), Query Frame = 2
Query:  188 PPRRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVG 814
            P RR+ +GR+++A HPDT+RAA++EF++T IFVFA EGS+L+L K+    +T+                     ++N SGGHVNPAVTFGAL+GGR+S+VRA+ YW+AQLLGA+ A LLLR AT GMRP GF +ASGVG+ H ++LE VMTFGL+Y  YATVIDPKRG +G + PLA+GF++GAN+L GGPFDGA MNPAR FGPALVG
Sbjct:    7 PGRRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTA-GGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVG 214          
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 8.764e-69
Identity = 124/209 (59.33%), Postives = 157/209 (75.12%), Query Frame = 2
Query:  194 RRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKI--SKATTTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALVG 814
            RR+ +GR+++A HPDT+RAA++EF++T IFVFA EGS+L+L K+    +T ++                     ++N SGGHVNPAVTFGAL+GGR+S+VRA+ YW AQLLGA+ A LLLR AT G RP GF +ASGVG+GH ++LE VMTFG VY  YATV+DPKRG LG + PLA+GF++GAN+L GGPFDGA MNPAR FGPALVG
Sbjct:   11 RRFTVGRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVG 219          
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.470e-63
Identity = 124/209 (59.33%), Postives = 149/209 (71.29%), Query Frame = 2
Query:  185 MPPRRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV 811
            MP R  AIGR DEA  PD ++AALAEF+STLIFV AG GS +A +K+++   T+PS                     N SGGHVNPAVTFGA +GG I+++R I YWIAQLLG++VA L+L+FAT G+    F +++GVG  +  V EIVMTFGLVYTVYAT IDPK GSLG + P+AIGFIVGANIL GG F GASMNPA AFGPA+V
Sbjct:    1 MPIRNIAIGRPDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV 209          
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.091e-62
Identity = 119/209 (56.94%), Postives = 148/209 (70.81%), Query Frame = 2
Query:  185 MPPRRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV 811
            MP  R A+G   E +HPDT +AA+AEF+S LIFVFAG GS +A  K++    T+PS                     N SGGHVNPAVTFGA +GG IS+V+A+ YW+AQLLG++VA LLL+ AT G     F +++GVG  + +V EIVMTFGLVYTVYAT +DPK+G LG++ P+AIGFIVGANIL GG FDGASMNPA +FGPA+V
Sbjct:    1 MPVSRIAVGAPGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 209          
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.945e-62
Identity = 117/209 (55.98%), Postives = 149/209 (71.29%), Query Frame = 2
Query:  185 MPPRRYAIGRADEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV 811
            MP  R A+G   E +HPDT +AA+AEF+STLIFVFAG GS +A  K++     +P+                     N SGGHVNPAVTFGA +GG IS+++A+ YW+AQLLG++VA LLL+ AT G     F +++GVG  + +VLE+VMTFGLVYTVYAT +DPK+G LG++ P+AIGFIVGANIL GG FDGASMNPA +FGPA+V
Sbjct:    1 MPVSRIAVGAPGELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVV 209          
BLAST of CX675989 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 6.726e-61
Identity = 124/210 (59.05%), Postives = 145/210 (69.05%), Query Frame = 2
Query:  185 MPPRRYAIGRA-DEAAHPDTMRAALAEFVSTLIFVFAGEGSILALDKISKATTTSPSDXXXXXXXXXXXXXXXXXSSINTSGGHVNPAVTFGALLGGRISVVRAIYYWIAQLLGAIVAALLLRFATNGMRPVGFYVASGVGEGHGLVLEIVMTFGLVYTVYATVIDPKRGSLGIVGPLAIGFIVGANILVGGPFDGASMNPARAFGPALV 811
            MP R  AIG   +E  HP+ +RAALAEF+STLIFVFAG GS +A +KI+    T+PS                     N SGGHVNPAVTFG LLGG I+++R I YWIAQLLG++ A  LL FAT G     F +++GVG  + LV EIVMTFGLVYTVYAT +DPK GSLG + P+AIGFIVGANIL GG F GASMNPA AFGPA+V
Sbjct:    1 MPTRNIAIGGVQEEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV 210          
The following BLAST results are available for this feature:
BLAST of CX675989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 162
Match NameE-valueIdentityDescription
TIP32_ARATH1.762e-7766.97Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP31_ARATH3.323e-7666.51Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIPA_PHAVU5.865e-7365.24Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]
TIP31_ORYSJ1.352e-6959.43Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP31_MAIZE5.138e-6959.81Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1[more]
TIP32_MAIZE8.764e-6959.33Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP11_ARATH2.470e-6359.33Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP12_ORYSJ2.091e-6256.94Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP12_MAIZE7.945e-6255.98Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP12_ARATH6.726e-6159.05Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_66C02_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66C02-F4-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675989 ID=CX675989; Name=CX675989; organism=Citrus sinensis; type=EST; length=816bp
AATACTAAAAAAAGCCGCAGCATCATCCATTAACACTCCTCTCTTTACCT
TTTCACCTTCAAAATCAAACTCTCATAAGCAGAAGCAGAAGCAGCTTTTT
GGTGGGGATAATCTGATTGTTGTTTTTGAAGAAATTAAAAAAATTGATAT
AAAGATTACTTCAACACGAGTGTACATAGCCAACATGCCACCTCGTAGAT
ATGCAATTGGGAGGGCTGATGAGGCTGCTCATCCAGACACCATGAGAGCT
GCCTTGGCTGAATTTGTTTCCACTCTGATCTTTGTCTTCGCCGGCGAAGG
CTCTATACTTGCTCTAGACAAGATATCTAAGGCCACAACTACATCACCTT
CTGATCTGGTGGTGATAGCACTTGCACATGCTTTAGCCCTATTTGCGGCG
GTGGCCTCGAGCATCAACACCTCCGGTGGCCATGTCAATCCTGCTGTTAC
CTTCGGTGCACTTCTTGGTGGAAGAATCTCCGTCGTTCGCGCCATCTATT
ACTGGATTGCTCAGCTCTTGGGTGCCATTGTTGCTGCCCTCCTCTTAAGA
TTCGCCACCAATGGCATGAGACCAGTGGGGTTTTATGTGGCATCTGGGGT
TGGAGAAGGGCACGGGCTTGTGCTGGAGATAGTGATGACATTTGGTTTGG
TTTACACTGTCTACGCAACAGTGATTGATCCCAAAAGAGGAAGCCTGGGG
ATAGTTGGACCTCTGGCCATCGGGTTCATCGTCGGCGCCAACATTCTGGT
AGGTGGACCGTTTGACGGAGCATCAATGAATCCGGCCAGGGCATTCGGAC
CGGCACTCGTGGGCTG
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