CX675985

Overview
NameCX675985
Unique NameCX675985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length960
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX675985 vs. ExPASy Swiss-Prot
Match: HEAT1_ARATH (Uncharacterized protein At3g06530 OS=Arabidopsis thaliana GN=At3g06530 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 2.152e-35
Identity = 85/173 (49.13%), Postives = 114/173 (65.90%), Query Frame = -1 
Query:    1 EQALGLLCETVKDLGMAKPKHKRRRELDPDSNSRWFHLDDSAFESFRKMCSEVVLLVDNSTGESNISLKLTAVSTLEVLANRFASYDSVFNLCLASVTNSISSRNLALASSCLRTTGALVNVLGLKALAELPLIMENVRKKSREISTYVDVQNESNEDKTQRES-LMASVLIT 516
            ++ LGL+ E  KD   +K KHKR+       NS W +LD+ A +SF KMC E+V L++ +  ES + +K  A+STLEVLA RF S   +F  CLA+V   ISS+NL ++SSCLRTTGAL+NVLG KAL ELP IM+N+ K+S E+S      ++S  + T  E  LM SVL+T
Sbjct: 1434 KKVLGLISERAKDTSSSKMKHKRKISNQKGRNS-WLNLDEVAVDSFGKMCEEIVHLINATDDESGVPVKRAAISTLEVLAGRFPSGHPIFRKCLAAVAECISSKNLGVSSSCLRTTGALINVLGPKALIELPCIMKNLVKQSLEVS----FASQSGRNATAEEQLLMLSVLVT 1601
The following BLAST results are available for this feature:
BLAST of CX675985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
HEAT1_ARATH2.152e-3549.13Uncharacterized protein At3g06530 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_66B10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66B10-D20-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675985 ID=CX675985; Name=CX675985; organism=Citrus sinensis; type=EST; length=960bp
AGTAATGAGAACAGATGCCATGAGAGATTCTCTCTGAGTCTTATCCTCAT
TACTTTCATTTTGCACATCCACATAGGTAGAGATTTCACGTGACTTCTTT
CTCACATTCTCCATAATAAGAGGCAGCTCCGCTAATGCCTTTAGCCCTAG
CACATTAACCAAAGCGCCAGTAGTTCGTAGACAGCTGGAAGCTAGAGCCA
AGTTGCGTGAACTAATGCTATTGGTCACAGACGCGAGGCACAAGTTGAAG
ACAGAATCATAAGAAGCAAATCTATTTGCCAAAACTTCTAGTGTTGAAAC
TGCTGTCAGCTTCAATGAAATGTTCGATTCTCCAGTGGAATTATCAACTA
GCAGGACAACCTCCGAGCACATCTTGCGAAAAGATTCAAAAGCACTATCA
TCCAGATGAAACCAACGGCTATTTGAATCAGGATCAAGTTCTCTTCTCCG
TTTATGCTTTGGTTTAGCCATGCCAAGGTCCTTCACTGTTTCACATAGAA
GTCCAAGAGCCTGCTCACAAGTACAAATTTCTCCGTTAAACAATGAAGCA
TACAGGTTCACAGGGGCTACAGACAATTGAACCTCAAGCCAATGCATCAC
TGCTTGAGTGAAACATTTGTGTGCTCAAAAAGTAATGATAATAATAACAT
GAAGCTTGAAAATAGAACAGGTGATGATTTGTGAAACAATTCGCTGACAT
ATTTGTTGTGTTACACACCTGAGGATGCAACAAATGTGTCCACAAATATA
TGGCACTCAAATGGAAAGTTAAAGGATAATGTGCCTTCATTTGCTTTAAG
CACGTGCAACAATTTGGTTGTGCTGCAAATTTTTTGTTATAAAACTTCCA
ATTTGCTGTCTTCAACAACTCATGTCTATTTCTACAACTTTTATAACTTC
TCATCTTTCATTTCTCTTTATAAGAGTAAACTTCTACAAAAATCATGCAA
GGAAATCAAT
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