CX675984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 4.101e-77 Identity = 143/257 (55.64%), Postives = 186/257 (72.37%), Query Frame = 2 Query: 2 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIR-NGKGVDELLDSMKADGIDEDEETKEIL 769 +DW+TYA AA FYI D+A ++LK +E RLE+KDG GYN LI+LYA LG K EVLRLWDLEK CKR IN+DY+T+L++L+K+ EAE+VL EW+ SGN YD R+PN VI GY + + AEA+LEDL +GKATTP SW +VA Y + G E F+CMK AL V V + W+P ++TS+LS +GDEGS+++VE+FVA+LR I +N+QMYHA +KA+IR G+ +D LL MK D I+ DEET IL Sbjct: 230 MDWNTYAVAAKFYIDGGDCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVIL 486
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.883e-35 Identity = 91/255 (35.69%), Postives = 141/255 (55.29%), Query Frame = 2 Query: 2 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLE-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD-ELLDSMKADGIDEDEETK 760 LDW TYA A+ YIKA L +KA ++L+K+E+ + QK Y L+S Y + G K EV RLW L K Y N YI+++ AL+K+ + EE EK+++EWE + +D RIP+ +I GYC G+++ AE ++ LV+K + ++W +A GY AGK E+ + K A+ V GW+P V+ S + L EG +D+E LR + Y + NG G+ +++D+M E+ E + Sbjct: 243 LDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFY-NTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIE--VSKPGWRPHQVVLMSCVDYL--EGQ-RDMEGLRKILRLLSERGHISYDQLLYD--MNGAGLSWKIVDAMGKGRYVEEREVR 489
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.199e-33 Identity = 74/242 (30.58%), Postives = 130/242 (53.72%), Query Frame = 2 Query: 8 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKAD 733 WS+ + A+ YIK+ +KA VL+ AE+ L + + +GY FLI+LYASLGNK V+RLW++ K+ C R +YI +L +L+K G+ EEAE+V EWE +YD R+ N ++ Y NG ++ AE++ ++E+G +W ++ G+ E+ M V + W+P ++ +I E +++ A+V L + + +Y ++ + + ++ + MK D Sbjct: 249 WSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVF-VLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLD 489
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.057e-32 Identity = 76/258 (29.46%), Postives = 139/258 (53.88%), Query Frame = 2 Query: 5 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCT 778 DW TY+ + Y K + ++KA LK+ E+ + +K+ + Y LISL+A+LG+K V W K++ K+ + +Y++M+ A++KLGE E+A+ + EWE + D RIPN ++ Y N V E E +VEKG + ++W ++ Y E+ C A+ K W + +++ +L ++G+V+ E + L+ +N Q+Y++ ++ + G+ + + M D ++ DEETKE++ T Sbjct: 265 DWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAID---SVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLT 519
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.381e-32 Identity = 77/260 (29.62%), Postives = 131/260 (50.38%), Query Frame = 2 Query: 5 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG----WKPDPKVITSILSKLGDEGSVQDVEAFVAALRT-VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 769 DW+TY++ A Y+ A L KA L++ E + Q+D Y FLI+LY LG +EV R+W + A + N Y+ M++ L+KL + AE + KEW+ + ++YD RI N +I Y GL+Q A + E +G +W + Y +G R +CM A+S+ GKG W P P+ + +++S + V E + L+ + +++ I+ GK + +K + ++ +E TK++L Sbjct: 228 DWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSI---GKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLL 484
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 5.803e-31 Identity = 72/224 (32.14%), Postives = 121/224 (54.02%), Query Frame = 2 Query: 5 DWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG-KGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFI 673 +W+T+++ A YIK +KA D L+K E R+ ++ I Y++L+SLY SLGNK E+ R+W + K+ N Y ++ +L+++G+ E AEKV +EW +SYD RIPN ++ Y N ++ AE + + +VE G + ++W ++A G+ C++ A S EG W+P +++ +E V EA + LR + + Y A I Sbjct: 274 NWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFS--AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLALI 495
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana GN=At4g01990 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.282e-27 Identity = 75/254 (29.53%), Postives = 119/254 (46.85%), Query Frame = 2 Query: 8 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 769 W+T+A+ A YIK L KA + LK E + Y+FLI+LY + N SEV R+WDL K N Y+TML AL KL + + +KV EWE + +YD R+ N I Y + + AEA+ ++K K + ++ + + + +AA V + K W ++I+S + V E F L P++ + Y +K + GK ++ ++ GI DEE + +L Sbjct: 246 WNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAA--VLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana GN=At1g02370 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.084e-24 Identity = 68/255 (26.67%), Postives = 120/255 (47.06%), Query Frame = 2 Query: 8 WSTYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG-WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 769 W+T+++ A Y KA L +KA LK EE++ + ++FL+SLYA + EV R+W+ K A N Y+ ML+A+ KLG+ + +K+ EWE +YD R+ N I Y + + AE IL+ ++K K + ++ + K + + ++AA+S E K W ++++ V E F L P++ + IK K ++ + + I+ EE +++L Sbjct: 278 WNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLL 532
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana GN=At1g28020 PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 1.175e-15 Identity = 45/140 (32.14%), Postives = 74/140 (52.86%), Query Frame = 2 Query: 2 LDWSTYASAAHFYIKANLIDKASDVLKKAEERLEQKD-GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 418 L+W T A Y++A KA +L+ E+ ++QK Y+ L+ LY GN+ EVLR+W L K+ N Y T++ +L+K+ + AE++ K WE +D RIP + GY + G+ + AE ++ K + Sbjct: 242 LEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDR 381
BLAST of CX675984 vs. ExPASy Swiss-Prot
Match: PPR50_ARATH (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.033e-12 Identity = 57/199 (28.64%), Postives = 93/199 (46.73%), Query Frame = 2 Query: 5 DWS------TYASAAHFYIKANLIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 574 DWS TY + Y +A +D+A + + ++ + YN L+ Y+ +G +VL LW K KR +N D I T+LEAL KLG+ EA K+ + G DT N +I G C V A+ IL+++ ++ ++ GY+ G + F A+ Y+E KG P ++ +++S Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW---KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF-----AVKEYMERKGIFPTIEMYNTLIS 584 The following BLAST results are available for this feature:
BLAST of CX675984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675984 ID=CX675984; Name=CX675984; organism=Citrus sinensis; type=EST; length=836bpback to top |