CX675983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 1.016e-71 Identity = 135/245 (55.10%), Postives = 176/245 (71.84%), Query Frame = -2 Query: 183 YIKANFIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIR-NGKGVDELLDSMKADGIDEDEETKEIL 914 YI D+A ++LK +E RLE+KDG GYN LI+LYA LG K EVLRLWDLEK CKR IN+DY+T+L++L+K+ EAE+VL EW+ SGN YD R+PN VI GY + + AEA+LEDL +GKATTP SW +VA Y + G E F+CMK AL V V + W+P ++TS+LS +GDEGS+++VE+FVA+LR I +N+QMYHA +KA+IR G+ +D LL MK D I+ DEET IL Sbjct: 242 YIDGGDCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVIL 486
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.290e-31 Identity = 72/232 (31.03%), Postives = 125/232 (53.88%), Query Frame = -2 Query: 219 YIKANFIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKAD 914 YIK+ F +KA VL+ AE+ L + + +GY FLI+LYASLGNK V+RLW++ K+ C R +YI +L +L+K G+ EEAE+V EWE +YD R+ N ++ Y NG ++ AE++ ++E+G +W ++ G+ E+ M V + W+P ++ +I E +++ A+V L + + +Y ++ + + ++ + MK D Sbjct: 259 YIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVF-VLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGLASLPLYRLLLRMHEHAKRPAYDIYEMMKLD 489
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.307e-30 Identity = 83/243 (34.16%), Postives = 132/243 (54.32%), Query Frame = -2 Query: 192 YIKANFIDKASDVLKKAEERLE-QKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVD-ELLDSMKADGIDEDEETK 914 YIKA +KA ++L+K+E+ + QK Y L+S Y + G K EV RLW L K Y N YI+++ AL+K+ + EE EK+++EWE + +D RIP+ +I GYC G+++ AE ++ LV+K + ++W +A GY AGK E+ + K A+ V GW+P V+ S + L EG +D+E LR + Y + NG G+ +++D+M E+ E + Sbjct: 255 YIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFY-NTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIE--VSKPGWRPHQVVLMSCVDYL--EGQ-RDMEGLRKILRLLSERGHISYDQLLYD--MNGAGLSWKIVDAMGKGRYVEEREVR 489
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.623e-30 Identity = 72/249 (28.92%), Postives = 134/249 (53.82%), Query Frame = -2 Query: 168 YIKANFIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEILVCTME 914 Y K + ++KA LK+ E+ + +K+ + Y LISL+A+LG+K V W K++ K+ + +Y++M+ A++KLGE E+A+ + EWE + D RIPN ++ Y N V E E +VEKG + ++W ++ Y E+ C A+ K W + +++ +L ++G+V+ E + L+ +N Q+Y++ ++ + G+ + + M D ++ DEETKE++ T + Sbjct: 276 YAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAID---SVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAGEMALIVEERMAKDNVELDEETKELIRLTSQ 521
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 4.043e-28 Identity = 71/249 (28.51%), Postives = 122/249 (49.00%), Query Frame = -2 Query: 183 YIKANFIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG----WKPDPKVITSILSKLGDEGSVQDVEAFVAALRT-VIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 914 Y+ A KA L++ E + Q+D Y FLI+LY LG +EV R+W + A + N Y+ M++ L+KL + AE + KEW+ + ++YD RI N +I Y GL+Q A + E +G +W + Y +G R +CM A+S+ GKG W P P+ + +++S + V E + L+ + +++ I+ GK + +K + ++ +E TK++L Sbjct: 239 YVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSI---GKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLL 484
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 4.043e-28 Identity = 69/213 (32.39%), Postives = 113/213 (53.05%), Query Frame = -2 Query: 279 YIKANFIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEG-KGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFI 914 YIK +KA D L+K E R+ ++ I Y++L+SLY SLGNK E+ R+W + K+ N Y ++ +L+++G+ E AEKV +EW +SYD RIPN ++ Y N ++ AE + + +VE G + ++W ++A G+ C++ A S EG W+P +++ +E V EA + LR + + Y A I Sbjct: 285 YIKMGETEKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFS--AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLEDKSYLALI 495
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana GN=At4g01990 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.891e-24 Identity = 70/244 (28.69%), Postives = 111/244 (45.49%), Query Frame = -2 Query: 183 YIKANFIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 914 YIK KA + LK E + Y+FLI+LY + N SEV R+WDL K N Y+TML AL KL + + +KV EWE + +YD R+ N I Y + + AEA+ ++K K + ++ + + + +AA V + K W ++I+S + V E F L P++ + Y +K + GK ++ ++ GI DEE + +L Sbjct: 256 YIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAA--VLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana GN=At1g02370 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.787e-21 Identity = 64/245 (26.12%), Postives = 112/245 (45.71%), Query Frame = -2 Query: 183 YIKANFIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKG-WKPDPKVITSILSKLGDEGSVQDVEAFVAALRTVIPMNRQMYHAFIKANIRNGKGVDELLDSMKADGIDEDEETKEIL 914 Y KA +KA LK EE++ + ++FL+SLYA + EV R+W+ K A N Y+ ML+A+ KLG+ + +K+ EWE +YD R+ N I Y + + AE IL+ ++K K + ++ + K + + ++AA+S E K W ++++ V E F L P++ + IK K ++ + + I+ EE +++L Sbjct: 288 YTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMRERLSQQQIEVSEEIQDLL 532
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana GN=At1g28020 PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.649e-13 Identity = 41/128 (32.03%), Postives = 69/128 (53.91%), Query Frame = -2 Query: 534 YIKANFIDKASDVLKKAEERLEQKD-GIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYITMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGK 914 Y++A KA +L+ E+ ++QK Y+ L+ LY GN+ EVLR+W L K+ N Y T++ +L+K+ + AE++ K WE +D RIP + GY + G+ + AE ++ K + Sbjct: 254 YLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDR 381
BLAST of CX675983 vs. ExPASy Swiss-Prot
Match: PPR50_ARATH (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.439e-11 Identity = 52/182 (28.57%), Postives = 88/182 (48.35%), Query Frame = -2 Query: 378 YIKANFIDKASDVLKKAEERLEQKDGIGYNFLISLYASLGNKSEVLRLWDLEKTACKRYINRDYI---TMLEALMKLGEHEEAEKVLKEWELSGNSYDTRIPNAVIIGYCNNGLVQNAEAILEDLVEKGKATTPNSWAVVAAGYFDAGKTERGFQCMKAALSVYVEGKGWKPDPKVITSILS 914 Y +A ++D+A + + ++ + YN L+ Y+ +G +VL LW K KR +N D I T+LEAL KLG+ EA K+ + G DT N +I G C V A+ IL+++ ++ ++ GY+ G + F A+ Y+E KG P ++ +++S Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW---KMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAF-----AVKEYMERKGIFPTIEMYNTLIS 584 The following BLAST results are available for this feature:
BLAST of CX675983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675983 ID=CX675983; Name=CX675983; organism=Citrus sinensis; type=EST; length=915bpback to top |