CX675980

Overview
NameCX675980
Unique NameCX675980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_PYRFU (2-phosphoglycerate kinase OS=Pyrococcus furiosus GN=pgk2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.150e-13
Identity = 51/167 (30.54%), Postives = 87/167 (52.10%), Query Frame = 1
Query:    4 ELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVW--ARNFSSSEELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLMD 480
            E+++ L+      V++ ++    ++ +  +G+ EE   RY    RF   ++PL+IL+ G   VGKSTIAT+LA RL + +V+ TD + E++R      L      S+   W   R   +   ++  F  +   V  G+   +++A+K+G   IIEGIHL P    +D
Sbjct:   40 EVQEELIRQGKKVVTKEEIRNITYQKLVEKGFKEE-AKRYLFWRRFRKLKIPLIILLGGPTGVGKSTIATELAFRLGIRSVIGTDTIREVMRKIITPELLPTIHTSTFLAWKELRGTVTGSPIIAGFESQVNAVAVGVNAVIQRAIKEGLNAIIEGIHLVPGFIKID 205          
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_PYRHO (2-phosphoglycerate kinase OS=Pyrococcus horikoshii GN=pgk2 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13
Identity = 51/170 (30.00%), Postives = 89/170 (52.35%), Query Frame = 1
Query:    1 LELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVW--ARNFSSSEELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSIYLMDDD 486
            +E+++ LV      V++ ++    ++ +  +G+ EE   RY    RF   +VPL+IL+ G   VGKSTIAT+LA RL + +V+ TD + E+LR      L      S+   W   +   +   +V  F  +   V  G+   +++A+++G   IIEGIH+ P    ++ +
Sbjct:   39 IEVQEELVKKGKTIVTKDEIRKLTYQKLIEKGFKEE-AKRYIFWRRFRKMKVPLIILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKIITPELLPTIHTSTFLAWKELKGTVTDSPIVAGFESQVSAVTVGINAIIERAVREGLNAIIEGIHVVPGFVKVEGE 207          
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_PYRAB (2-phosphoglycerate kinase OS=Pyrococcus abyssi GN=pgk2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.454e-13
Identity = 50/162 (30.86%), Postives = 85/162 (52.47%), Query Frame = 1
Query:    1 LELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVW--ARNFSSSEELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDP 462
            +E+++ L       V++ ++    ++ +  +G+ EE   RY    RF   +VPL+IL+ G   VGKSTIAT+LA RL + +V+ TD + E+LR      L      S+   W   +  +S   ++  F  +   V  G+   +++A ++G   IIEGIH+ P
Sbjct:   39 IEVQEELTRKGKSIVTKDEIRKLTYQKLVEKGFKEE-AKRYLFWRRFRKMKVPLLILLGGPTGVGKSTIATELAFRLGIRSVIGTDSIREVLRKVITPELLPTIHTSTFLAWKEIKGTTSGSPIIAGFESQVSAVAVGVNAIIERAKREGLNAIIEGIHVVP 199          
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_METVS (2-phosphoglycerate kinase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pgk2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 52/168 (30.95%), Postives = 87/168 (51.79%), Query Frame = 1
Query:    4 ELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVW-ARNFSSSEELVTE------FVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSI 468
            E+++ L D  L  +S+ +L   ++  +  R Y E+   +Y +  R   +   ++ILV G + VG STIA +LA RL +P+V+ TD + E++R S    L      SS   W A   SS+EE  T+      F R    V  G+   + +++ +G  +I+EG H+ P +
Sbjct:   46 EIERDLTDQGLRKISKDELRRRVYYALINRDY-EDIAEKYLLWRRVLKKH-SIIILVGGASGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISKDLVPMLYESSYTAWKALRHSSAEEYDTKEMHLLGFERHVEPVLIGIESIIDRSLTEGMSVILEGTHIVPGL 211          
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_METKA (2-phosphoglycerate kinase OS=Methanopyrus kandleri GN=pgk2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12
Identity = 45/164 (27.44%), Postives = 86/164 (52.44%), Query Frame = 1
Query:    1 LELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVWAR-NFSSSEE-LVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSI 468
            L++K+ L D  + ++S  +L   +   +E     E    RY +  R   +  P+++L+ G + VG STIA+++  RL + NV+ TD + E++R      L      SS   W R  +  +E+ ++T F+     V  G+ G + +++ +G  +I+EG+H+ P +
Sbjct:   62 LKIKEELQDEGIEEISTDELADIIRTKLEE--IDETLAERYELWRRIKKREEPIIVLIGGASGVGTSTIASEVGHRLGITNVIGTDAIREVMRRVLAEELYPTLYESSYTAWKRLRYEPAEDPVITGFLDHSEPVVVGIEGVVNRSINEGIHVIVEGVHIVPRL 223          
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_METM7 (2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pgk2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.832e-12
Identity = 52/171 (30.41%), Postives = 90/171 (52.63%), Query Frame = 1
Query:    4 ELKKLLVDNSLLDVSQSDLEANLFKLMERRGY---GEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVW-ARNFSSSEELVTE------FVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSI 468
            E+++ L + ++L +S+ +L   ++  +  R Y   GE+Y+   R++ +       ++ILV G++ VG STIA +LA RL +P+V+ TD + E++R S    L      SS   W A   S  EE  T+      F R    V  G+   + +++ +G  +IIEG H+ P +
Sbjct:   46 EIERDLTEQNVLKISKDELRRRVYYTLINRDYEGIGEKYLLWRRVLKKHS-----IIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISKDLVPMLYESSYTAWTALRRSQWEEQDTKGMHLLGFERHVEPVLLGIESIIDRSLTEGTSVIIEGTHIVPGL 211          
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_METJA (2-phosphoglycerate kinase OS=Methanocaldococcus jannaschii GN=pgk2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.241e-12
Identity = 44/162 (27.16%), Postives = 84/162 (51.85%), Query Frame = 1
Query:    4 ELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVW-ARNFSSSEELVTEFVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSI 468
            ++ ++L   ++  + ++DL   ++  +  + Y E  +++  ++ R    R P+VIL+ G + VG STIA ++A RL +P+V+ TD + E++R      L      SS   W         + +  F R    V  G+ G + + + +G+ +IIEG HL P++
Sbjct:   43 DIYEMLKKENIRVIDKADLRRRVYYYLISKNYDE--VAKKYLLWRMVLGRRPIVILIGGASGVGTSTIAFEIASRLGIPSVIGTDSIREVMRKVISRDLIPTLYESSYTAWKVLRDDEGNKYIKGFERHSEAVLTGVEGVIDRCLVEGQSVIIEGTHLVPTL 202          
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_METM5 (2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pgk2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 51/171 (29.82%), Postives = 90/171 (52.63%), Query Frame = 1
Query:    4 ELKKLLVDNSLLDVSQSDLEANLFKLMERRGY---GEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVW-ARNFSSSEELVTE------FVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSI 468
            E+++ L + ++L +S+ +L   ++  +  R Y   GE+Y+   R++ +       ++ILV G++ VG STIA +LA RL +P+V+ TD + E++R S    L      SS   W A   S  +E  T+      F R    V  G+   + +++ +G  +IIEG H+ P +
Sbjct:   46 EIERDLNEQNVLKISKDELRRRVYYTLINRDYEGIGEKYLLWRRVLKKHS-----IIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISKDLVPMLYESSYTAWTALRRSQWDEQDTKEMHLLGFERHVEPVLLGIESIIDRSLTEGTSVIIEGTHIVPGL 211          
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_METMP (2-phosphoglycerate kinase OS=Methanococcus maripaludis GN=pgk2 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 50/168 (29.76%), Postives = 90/168 (53.57%), Query Frame = 1
Query:    4 ELKKLLVDNSLLDVSQSDLEANLFKLMERRGYGEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVW-ARNFSSSEELVTE------FVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSI 468
            ++++ L + ++L +S+ +L   ++  +  R Y  E I+   ++ R   ++  ++ILV G++ VG STIA +LA RL +P+V+ TD + E++R S    L      SS   W A   SS EE  ++      F R    V  G+   + +++ +G  +IIEG H+ P +
Sbjct:   45 DIERELNEQNVLKISKDELRRRVYYTLINRDY--EAIAEKYLLWRRILKKHSIIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISKDLVPMLYESSYTAWTALRKSSWEEQDSKEMHLLGFERHVEPVLLGIESIIDRSLTEGTSVIIEGTHIVPGL 210          
BLAST of CX675980 vs. ExPASy Swiss-Prot
Match: PGK2_METM6 (2-phosphoglycerate kinase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pgk2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 50/171 (29.24%), Postives = 90/171 (52.63%), Query Frame = 1
Query:    4 ELKKLLVDNSLLDVSQSDLEANLFKLMERRGY---GEEYISRYRMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPL------SSSPVW-ARNFSSSEELVTE------FVRECRIVRKGLAGDLKKAMKDGKPIIIEGIHLDPSI 468
            E+++ L + ++L +S+ +L   ++  +  R Y   GE+Y+   R++ +       ++ILV G++ VG STIA +LA RL +P+V+ TD + E++R S    L      SS   W A   S  +E  T+      F R    V  G+   + +++ +G  +I+EG H+ P +
Sbjct:   46 EIERDLNEQNVLKISKDELRRRVYYTLINRDYEGIGEKYLLWRRVLKKHS-----IIILVGGSSGVGTSTIAFELASRLGIPSVIGTDSIREVMRRSISKDLVPMLYESSYTAWTALRRSPWDEQDTKEMHLLGFERHVEPVLLGIESIIDRSLTEGTSVILEGTHIVPGL 211          
The following BLAST results are available for this feature:
BLAST of CX675980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PGK2_PYRFU1.150e-1330.542-phosphoglycerate kinase OS=Pyrococcus furiosus G... [more]
PGK2_PYRHO1.962e-1330.002-phosphoglycerate kinase OS=Pyrococcus horikoshii... [more]
PGK2_PYRAB7.454e-1330.862-phosphoglycerate kinase OS=Pyrococcus abyssi GN=... [more]
PGK2_METVS1.661e-1230.952-phosphoglycerate kinase OS=Methanococcus vanniel... [more]
PGK2_METKA3.699e-1227.442-phosphoglycerate kinase OS=Methanopyrus kandleri... [more]
PGK2_METM74.832e-1230.412-phosphoglycerate kinase OS=Methanococcus maripal... [more]
PGK2_METJA8.241e-1227.162-phosphoglycerate kinase OS=Methanocaldococcus ja... [more]
PGK2_METM52.398e-1129.822-phosphoglycerate kinase OS=Methanococcus maripal... [more]
PGK2_METMP4.090e-1129.762-phosphoglycerate kinase OS=Methanococcus maripal... [more]
PGK2_METM65.342e-1129.242-phosphoglycerate kinase OS=Methanococcus maripal... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_66B07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66B07-D14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675980 ID=CX675980; Name=CX675980; organism=Citrus sinensis; type=EST; length=732bp
CTTGAACTCAAGAAGCTACTTGTAGACAACAGCCTTCTAGATGTATCGCA
ATCTGATTTGGAAGCTAATCTTTTTAAGCTTATGGAGCGAAGGGGCTATG
GAGAAGAATATATAAGTCGTTACAGGATGATGACCAGATTTCACCATCAA
AGGGTGCCATTAGTAATTCTTGTTTGTGGAACGGCCTGCGTTGGAAAGTC
AACTATAGCCACCCAACTTGCACAGAGGCTAAATTTGCCTAATGTCTTAC
AGACAGATATGGTGTACGAATTGCTGCGGACATCAACAGATGCACCGTTA
TCCTCTTCTCCTGTTTGGGCGCGGAACTTTAGCTCCTCTGAGGAGCTAGT
GACTGAATTTGTTAGAGAGTGCAGAATTGTTCGTAAAGGTTTGGCTGGTG
ATTTGAAGAAAGCAATGAAAGACGGAAAGCCAATCATAATTGAGGGAATA
CATTTGGACCCCAGCATTTATCTNATGGATGATGACAGTAAAGCACCAGC
TACCACCACAGAAAAGACAAACTCTGAATCTGTGCCATCAGATGATAATC
CTGTGACACAAGTGGAAAGTAACTCTGCAAGTGTTTGTGTAAGTGATCGG
GAAAATGGCAACAACAGCCCGGAGCAGCCTAGCACAGGAGGAAAGATATC
TAGTGAACAGGTCAATAAAATCGCCGATTCTCTTGAATCTATTGTCCTTG
CAGGAACATCTTCCGAGAATAAAGGTGAAACG
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