CX675978

Overview
NameCX675978
Unique NameCX675978
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length392
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX675978 vs. ExPASy Swiss-Prot
Match: PR4_PHAVU (Wound-induced basic protein OS=Phaseolus vulgaris GN=PR4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.833e-17
Identity = 40/47 (85.11%), Postives = 44/47 (93.62%), Query Frame = 1 
Query:   19 MIYDVNSPLFRSFLSQKGGASDKRKMEEQRPKEQRPKTNENKPVMTE 159
            MIYDVNSPLFRSFLSQKGG+SDKRK EEQ+PKE RPK +ENKP+MTE
Sbjct:    1 MIYDVNSPLFRSFLSQKGGSSDKRKTEEQKPKEHRPKASENKPIMTE 47
The following BLAST results are available for this feature:
BLAST of CX675978 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PR4_PHAVU1.833e-1785.11Wound-induced basic protein OS=Phaseolus vulgaris ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_66B05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-66B05-D10-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675978 ID=CX675978; Name=CX675978; organism=Citrus sinensis; type=EST; length=392bp
GATTATTCATAATCAACAATGATCTACGACGTGAACTCTCCTCTCTTCCG
TTCCTTCCTCAGCCAGAAGGGCGGCGCTTCTGACAAGAGGAAAATGGAAG
AGCAAAGGCCAAAAGAACAAAGACCCAAAACAAATGAGAACAAGCCTGTC
ATGACAGAGTGAGAGTTGCGTTTTGCTTGTAATGCTTCAGTGATGAGATA
GAAGTAGTACGGTTCAGTGGTCACATTCATCCAAATGTAACTGATTCTGA
TTTTCCTTGGTTTATGGGTTTGTAGTGGTCTGTGCTTGGATTTGGATGTT
TCTTGTGGAACAAAAAATGTTTGGTAGTGCTATTATGCATTTAATATATT
ATTAAGGAAGCACTGGTGTTGTATGTTAAAAAAAAAAAAAAA
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