CN189046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL1_ARATH (Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1) HSP 1 Score: 455.677 bits (1171), Expect = 1.281e-127 Identity = 224/253 (88.54%), Postives = 242/253 (95.65%), Query Frame = 1 Query: 4 EALKEAFEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKY 762 +ALKEAFEIFCNK V GSSS+ELLATFCDNILKKGG+EKLSDEAIE+TLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ SFE+YL +N A+PGIDL+VTVLTTGFWPSYKS D+NLPSEM+KCVEVFKGFYETKTKHRKLTWIYSLG C+INGKF+QK IELIVSTYQAA LLLFNT+D+LSY+EI+ QLNL+H+DLVRLLHSLSCAKY Sbjct: 365 KALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLSHEDLVRLLHSLSCAKY 617
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL4B_HUMAN (Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=3) HSP 1 Score: 202.601 bits (514), Expect = 1.954e-51 Identity = 106/251 (42.23%), Postives = 160/251 (63.75%), Query Frame = 1 Query: 7 ALKEAFEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 A+KEAFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++Y+ N QN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL W +LG C + +F++ EL VS +Q LL+FN + S EI + +L R L SL+C K Sbjct: 525 AMKEAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGK 771
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL4A_HUMAN (Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3) HSP 1 Score: 196.823 bits (499), Expect = 1.072e-49 Identity = 103/250 (41.20%), Postives = 157/250 (62.80%), Query Frame = 1 Query: 10 LKEAFEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 +KE+FE F NK + +EL+A D+ L+ GN++ +DE +E TL+K++ L +I KD+F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++++ N ++ P IDL+V +LT G+WP+Y +++L EM+K EVFK FY K RKL W +LG + +F++ E VS +Q LL+FN D S+ EI + +L R L SL+C K Sbjct: 390 MKESFETFINKRP--NKPAELIAKHVDSKLR-AGNKEATDEELERTLDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSDSGP-IDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGK 635
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL4A_MOUSE (Cullin-4A OS=Mus musculus GN=Cul4a PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.951e-49 Identity = 104/250 (41.60%), Postives = 156/250 (62.40%), Query Frame = 1 Query: 10 LKEAFEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 +KE+FE F NK + +EL+A D+ L+ GN++ +DE +E L+K++ L +I KD+F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F++++ N Q+A IDL+V +LT G+WP+Y +++LP EMV+ EVFK FY K RKL W +LG + F++ E VS +Q LL+FN D S+ EI + +L R L SL+C K Sbjct: 390 MKESFETFINKRP--NKPAELIAKHVDSKLR-AGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQN-QSAPGPIDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGK 635
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL3_DICDI (Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.186e-48 Identity = 104/251 (41.43%), Postives = 158/251 (62.95%), Query Frame = 1 Query: 7 ALKEAFEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 ++++AFE F N S E ++ F D LKKG + +S+E ++ L+K++ L I +KD+F ++Y++ LA+RLL RS +DD ER+++ KLK +CG QFTSK+EGM TD+ L+++ + F+ Y+ N + A P IDL+V VLTTGFWP+ +++ NLP E++ C E FK +Y + R L W ++G I F K+ EL VS+YQ LLLFN +L++ EI Q + DL R L +L+ K Sbjct: 364 SIQQAFEYFINL---NPKSPEYISLFIDEKLKKG-LKGVSEEEVDIILDKILMLFRLIQEKDVFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTMSGFKTYIQNLKKALP-IDLNVHVLTTGFWPTQNTANCNLPREILLCCEAFKSYYLSNHNGRLLLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLLALTNPK 609
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL2_DICDI (Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.302e-42 Identity = 90/236 (38.14%), Postives = 142/236 (60.17%), Query Frame = 1 Query: 55 SSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSY-KSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 + S ELLA +CD +LKKG N++ + +EE L +++ L Y+ DKD+F +FY K L+RRL+ S +DD E+ ++T LKQ CG ++TSK + M D+TL+ E F+ +L N + ID S+ VLT+G W + ++S +P E+ C+ F+ +Y T+ + RKL W++ L + F +K+ + V+ +Q LL+FNT + +S EI NL ++L R L SL AK Sbjct: 379 TKSPELLAKYCDMLLKKG-NKQHEEIELEEKLGQIIVLFKYVDDKDVFQKFYSKMLSRRLINGTSVSDDIEKFMITGLKQACGFEYTSKFQRMFNDITLSAETNEEFKNHLIKNSLSIGKIDFSILVLTSGSWSLHSQTSSFIVPQELTLCISAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKSYDFQVTNFQLGILLIFNTQESVSLEEITKFTNLNENELSRTLQSLIEAK 613
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL3A_XENLA (Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.027e-40 Identity = 95/270 (35.19%), Postives = 154/270 (57.04%), Query Frame = 1 Query: 22 FEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSS-DLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF-----------------------EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R+LT + +G ++N F +K+I L VST+Q L+LFN D+ ++ EI + ++ +LVR L SL+C K Sbjct: 374 FEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLACGK 638
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL3B_XENLA (Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.516e-40 Identity = 94/270 (34.81%), Postives = 154/270 (57.04%), Query Frame = 1 Query: 22 FEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSS-DLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF-----------------------EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R+LT + +G ++N F +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+C K Sbjct: 374 FEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVGVGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGK 638
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL3_XENTR (Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.898e-40 Identity = 94/270 (34.81%), Postives = 154/270 (57.04%), Query Frame = 1 Query: 22 FEIFCNKPVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSS-DLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF-----------------------EQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++ F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R+LT + +G ++N F +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+C K Sbjct: 374 FEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGK 638
BLAST of CN189046 vs. ExPASy Swiss-Prot
Match: CUL4_SCHPO (Cullin-4 OS=Schizosaccharomyces pombe GN=cul4 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.314e-39 Identity = 90/256 (35.16%), Postives = 148/256 (57.81%), Query Frame = 1 Query: 7 ALKEAFEIFCNKPVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK 759 A+++AFE F N G + + L+A + D +L+ G + + ++E +++ L YI+ KD+F +Y+ +A+RLL ++SA+ +E +L LK+ CG QFT +EGM D+ +++E +SF + + N H DL V VL+ +WPSY S + LP +M + ++ F+ FY +K +K++W SLG C + +F N EL +S +QA LL FN + +SY ++ L+ DL R L SLSCA+ Sbjct: 359 AMRKAFETFINGAKGSQREAPARLIAKYIDYLLRVG-EQASGGKPLKEVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQNELMLLDMLKKTCGSQFTHSLEGMFRDVNISKEFTSSFRHSKAAH-NLHR--DLYVNVLSQAYWPSYPESHIRLPDDMQQDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCAR 610 The following BLAST results are available for this feature:
BLAST of CN189046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189046 ID=CN189046; Name=CN189046; organism=Citrus sinensis; type=EST; length=762bpback to top |