CN182400

Overview
NameCN182400
Unique NameCN182400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: UMPK_ARATH (Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 PE=1 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.672e-68
Identity = 125/150 (83.33%), Postives = 140/150 (93.33%), Query Frame = -2
Query:  264 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKDEKAAA 713
            IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKA++E+GNDKFLIDGFPRNEENRAAFE VT+IEP+FVLFFDC EEEME+R+L RNQGREDDN+ETIRKRFKVFLESSLPV+ YYEAKGKVRKI+AAKP+  VF+ VKA+F+P+ EK  A
Sbjct:   53 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAAKPIEAVFEEVKAIFSPEAEKVEA 202          
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: KAD_PRUAR (Adenylate kinase OS=Prunus armeniaca PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.540e-43
Identity = 82/143 (57.34%), Postives = 109/143 (76.22%), Query Frame = -2
Query:  285 IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 713
            I SGS  G++I + I+EGKIVPS+VT++L+QK ME S N KFLIDGFPR+EENR AFE     EP+ VLFFDC E+EM +R+LNRNQGR DDN++TI+KR ++F E + PV+ YY  +GK+ KI+A   V E+F+ V+ +F P
Sbjct:   86 IASGSAYGSVILSTIREGKIVPSQVTVELIQKEMESSDNYKFLIDGFPRSEENRKAFEQTIGAEPDVVLFFDCPEQEMVKRVLNRNQGRVDDNIDTIKKRLEIFDELNWPVINYYSQRGKLHKINAVGTVDEIFEKVRPIFAP 228          
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: KCY_XENLA (UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 4.397e-31
Identity = 71/149 (47.65%), Postives = 98/149 (65.77%), Query Frame = -2
Query:  291 KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAME-----ESGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 710
            K  S+ G +I++ I++GKIVP E+TI LLQ+AME     ++   KFLIDGFPRNE+N   +E     K +  FVLFFDC  E    R L R +  GR DDN E++ KR + +L+S+ P++  YE +GKVRK+DA+K V EVF  V+ +F
Sbjct:   44 KPDSQYGELIESYIRDGKIVPVEITISLLQRAMERTMAFDANKHKFLIDGFPRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNRESLEKRIQTYLQSTRPIIDLYEKRGKVRKVDASKSVDEVFTKVQNIF 192          
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: KCY_XENTR (UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.722e-30
Identity = 71/149 (47.65%), Postives = 99/149 (66.44%), Query Frame = -2
Query:  291 KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES----GND-KFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 710
            K  S+ G +I++ I++G+IVP E+TI LLQ+AME++    GN  KFLIDGFPRNE+N   +E     K +  FVLFFDC  E    R L R +  GR DDN E++ KR + +L+S+ P++  YE  GKV+K+DA+K V EVF  V+ +F
Sbjct:   44 KPDSQYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGFPRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNRESLEKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEVFTKVQDIF 192          
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: KCY_CHICK (UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.862e-30
Identity = 70/149 (46.98%), Postives = 97/149 (65.10%), Query Frame = -2
Query:  291 KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-----SGNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 710
            + GS+ G +I+N IKEG+IVP E+TI LL++AM++     S  +KFLIDGFPRNE+N   +      K +  FVLFFDC  E    R L R +  GR DDN E++ KR   +L+S+ P++  YE  GKVR++DA+K V EVF+ V  +F
Sbjct:   44 RPGSQYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDNLQGWNKTMDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNRESLEKRIHTYLQSTRPIIDLYERMGKVRRVDASKSVDEVFEKVVQIF 192          
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: KCY_DICDI (Cytidylate kinase OS=Dictyostelium discoideum GN=pyrK PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29
Identity = 68/144 (47.22%), Postives = 98/144 (68.06%), Query Frame = -2
Query:  291 KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK--IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 710
            +SGS++G MI  MIK G+IVPS VT+KLL+ A++ +    FL+DGFPRNEEN  ++E   K  ++ +FVLFFDC EE M +R+L R +  GR DDN+E+I+KRF  F   +  V+ +Y    KV+ I A + V EV++ V+ +F
Sbjct:   47 QSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYNDVENLF 190          
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: KCY_DANRE (UMP-CMP kinase OS=Danio rerio GN=cmpk1 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29
Identity = 71/153 (46.41%), Postives = 101/153 (66.01%), Query Frame = -2
Query:  279 KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGND-----KFLIDGFPRNEENRAAF--EAVTKIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKD 710
            ++ SE G +I + IKEGKIVP ++TI LL+KAMEE+        +FLIDGFPRN++N   +  E   K + +FVLFFDCS E    R L R +  GR DDN E++ KR + +L+S+ P+++ YE +GKV++IDA++ V EVF  VK +    D
Sbjct:   44 RTDSEFGQLIDSYIKEGKIVPVQITINLLRKAMEETMKADEKKFRFLIDGFPRNQDNLQGWNTEMDGKADVKFVLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPIIELYEKQGKVQRIDASRSVDEVFADVKNILEKDD 196          
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: KCY_HUMAN (UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29
Identity = 68/146 (46.58%), Postives = 95/146 (65.07%), Query Frame = -2
Query:  291 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-----GNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 701
            S+ G +I+  IKEGKIVP E+TI LL++ M+++       +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R +  GR DDN E++ KR + +L+S+ P++  YE  GKV+KIDA+K V EVFD V  +F
Sbjct:   47 SQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIF 192          
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: KCY_BOVIN (UMP-CMP kinase OS=Bos taurus GN=CMPK1 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29
Identity = 68/146 (46.58%), Postives = 95/146 (65.07%), Query Frame = -2
Query:  291 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-----GNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 701
            S+ G +I+  IK+GKIVP E+TI LL++ M+++       +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R +  GR DDN E++ KR + +L+S+ P++  YE  GKVRKIDA+K V EVFD V  +F
Sbjct:   47 SQYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVRKIDASKSVDEVFDEVVKIF 192          
BLAST of CN182400 vs. ExPASy Swiss-Prot
Match: KCY_PIG (UMP-CMP kinase OS=Sus scrofa GN=CMPK1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.564e-28
Identity = 67/146 (45.89%), Postives = 95/146 (65.07%), Query Frame = -2
Query:  291 SENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-----GNDKFLIDGFPRNEENRAAFEAVT--KIEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVF 701
            S+ G +I+  IK+GKIVP E+TI LL++ M+++       +KFLIDGFPRN++N   +      K +  FVLFFDC+ E    R L R +  GR DDN E++ KR + +L+S+ P++  YE  GKV+KIDA+K V EVFD V  +F
Sbjct:   47 SQYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVKIF 192          
The following BLAST results are available for this feature:
BLAST of CN182400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
UMPK_ARATH7.672e-6883.33Uridylate kinase OS=Arabidopsis thaliana GN=PYR6 P... [more]
KAD_PRUAR6.540e-4357.34Adenylate kinase OS=Prunus armeniaca PE=2 SV=1[more]
KCY_XENLA4.397e-3147.65UMP-CMP kinase OS=Xenopus laevis GN=cmpk1 PE=2 SV=... [more]
KCY_XENTR3.722e-3047.65UMP-CMP kinase OS=Xenopus tropicalis GN=cmpk1 PE=2... [more]
KCY_CHICK4.862e-3046.98UMP-CMP kinase OS=Gallus gallus GN=CMPK1 PE=2 SV=1[more]
KCY_DICDI3.151e-2947.22Cytidylate kinase OS=Dictyostelium discoideum GN=p... [more]
KCY_DANRE5.375e-2946.41UMP-CMP kinase OS=Danio rerio GN=cmpk1 PE=2 SV=2[more]
KCY_HUMAN7.020e-2946.58UMP-CMP kinase OS=Homo sapiens GN=CMPK1 PE=1 SV=3[more]
KCY_BOVIN7.020e-2946.58UMP-CMP kinase OS=Bos taurus GN=CMPK1 PE=2 SV=2[more]
KCY_PIG1.564e-2845.89UMP-CMP kinase OS=Sus scrofa GN=CMPK1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002G10_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182400 ID=CN182400; Name=CN182400; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTCAATCAATTACTTTTTTTTTTTTTTTTAAAGCATCAATGCTGTT
ATTATAACTCTTGATCTTGCTATTACAGTCTCAATAACAAGAATACATAG
GCAAACAAGAATAAATATCATGATACACTATGAACTTCTATGACATTCTA
GTAAAACATGTGACATAATAACCTCATAATAATAAAGTACAACAATAGGC
AGCAGCCAACAACAATACCACCACCTTGATATTAAATCTGATACTCTGGA
CAGAGAAGACCTAAGCAGCAGCCTTCTCATCTTTTGGGGTAAAAACAGCT
TTAACAGCATCAAAAACCTCTGCAACAGGCTTTGCAGCATCAATCTTCCG
AACTTTACCCTTAGCTTCATAATATTGAACCACAGGGAGACTAGATTCTA
AGAAAACCTTAAACCGCTTCCTAATTGTCTCAACGTTATCATCTTCTCTT
CCCTGATTCCTATTCAAAATGCGCCTCTCCATCTCCTCCTCAGAACAGTC
AAAAAACAGAACGAATTCTGGCTCAATTTTGGTAACAGCTTCAAATGCAG
CACGATTTTCCTCGTTCCTGGGAAAACCATCGATGAGAAATTTATCATTT
CCACTTTCCTCCATTGCTTTTTGGAGAAGCTTAATTGTGACCTCTGAAGG
AACGATTTTTCCCTCTTTAATCATGTTCTGAATCATGGTTCCATTTTCAG
AGCCAGATTTGATT
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