CN182388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_RAT (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Fragment) OS=Rattus norvegicus GN=Ndufa9 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.016e-26 Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = 2 Query: 194 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQ 487 ++ G GGRSSVSG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGDLGQ++ ++++ RD ++I+ + +NVVINLIGRE+ET+ Sbjct: 33 VIPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQLIFLEWDARDKDSIRKAVQHSNVVINLIGREWETR 130
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.263e-26 Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 2 Query: 194 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQ 487 ++ G GGRSSVSGI+ATVFG TGFLGRYVV L +MGSQV+VP R D HL+ MGDLGQI+ M +N RD ++I+ + ++VVINL+GRE+ETQ Sbjct: 40 VIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDLGQIIFMDWNGRDKDSIRRAVEHSSVVINLVGREWETQ 137
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFA9 PE=2 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 5.041e-26 Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = 2 Query: 194 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQ 487 L+ G GGRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ RD ++I+ + +NVVINLIGR++ET+ Sbjct: 40 LIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETK 137
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_PONPY (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo pygmaeus GN=NDUFA9 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 194 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQ 487 L+ G GGRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ ++++ RD ++I+ + +NVVINLIGR++ET+ Sbjct: 40 LIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETR 137
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_PONAB (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo abelii GN=NDUFA9 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26 Identity = 56/98 (57.14%), Postives = 77/98 (78.57%), Query Frame = 2 Query: 194 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQ 487 L+ G GGRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ ++++ RD ++I+ + +NVVINLIGR++ET+ Sbjct: 40 LIPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETR 137
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_PANTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pan troglodytes GN=NDUFA9 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26 Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = 2 Query: 194 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQ 487 L+ G GGRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ RD ++I+ + +NVVINLIGR++ET+ Sbjct: 40 LMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETK 137
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Homo sapiens GN=NDUFA9 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 8.598e-26 Identity = 56/98 (57.14%), Postives = 78/98 (79.59%), Query Frame = 2 Query: 194 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQ 487 L+ G GGRSSVSGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ RD ++I+ + +NVVINLIGR++ET+ Sbjct: 40 LMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETK 137
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_MOUSE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Mus musculus GN=Ndufa9 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.915e-25 Identity = 55/98 (56.12%), Postives = 76/98 (77.55%), Query Frame = 2 Query: 194 LVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQ 487 ++ G GGRSSVSG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGD GQ+ ++++ RD ++I+ + +NVVINLIGRE+ET+ Sbjct: 40 VIPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDPGQLTFLEWDARDKDSIRKAVQHSNVVINLIGREWETR 137
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_DICDI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Dictyostelium discoideum GN=ndufa9 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.793e-23 Identity = 54/112 (48.21%), Postives = 80/112 (71.43%), Query Frame = 2 Query: 167 SVATPGTGHLVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQKLRL 499 S +T L R G R+ +G++ATVFG TGF GRY+VQ LA+ G QV+VP+R CED+ R LK++G+LGQI+P++F+ RD +I+ ++ +N+VIN+ GR+YET+ L Sbjct: 17 SFSTINENPLTRIHHGSRTQTTGLVATVFGATGFTGRYLVQLLARTGIQVVVPYR-CEDEGFRDLKVLGELGQIIPVRFDIRDSESIERAISHSNIVINMAGRDYETRNFSL 127
BLAST of CN182388 vs. ExPASy Swiss-Prot
Match: NDUA9_NEUCR (NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-40 PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.088e-20 Identity = 52/118 (44.07%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 134 NGADHRRFGSTSVATPGTGHLVRKGTGGRSSVSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYETQ 487 N +R + V TG + + GGRSS+ G ATVFG TG LGRY+V +LA+ G V++PFR E + RHLK+ GDLG++V ++F+ R+ +I+ ++ ++VV NLIGR+Y T+ Sbjct: 18 NAFGFQRRAISDVTITRTGKPIIRNQGGRSSLGGHTATVFGATGQLGRYIVNRLARQGCTVVIPFRD-EYNKRHLKVTGDLGKVVMIEFDLRNTQSIEESVRHSDVVYNLIGRDYPTK 134 The following BLAST results are available for this feature:
BLAST of CN182388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN182388 ID=CN182388; Name=CN182388; organism=Citrus sinensis; type=EST; length=520bpback to top |