CN182376

Overview
NameCN182376
Unique NameCN182376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 8.143e-73
Identity = 123/137 (89.78%), Postives = 128/137 (93.43%), Query Frame = 3
Query:  153 MEGKEEDVRVGANRYRESQPIGTAAQ-TQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            MEGKEEDVR+GANRY E QPIGTAAQ   D KDY EPPPAPLFEPGEL SWSFYRAGIAEFVATFLFLYIT+LTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+F
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIF 137          

HSP 2 Score: 44.669 bits (104), Expect = 8.143e-73
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQK 624
            FY++MQCLGAICGA VVKGFQ+
Sbjct:  137 FYIVMQCLGAICGAGVVKGFQQ 158          
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 246.128 bits (627), Expect = 8.143e-73
Identity = 119/136 (87.50%), Postives = 127/136 (93.38%), Query Frame = 3
Query:  153 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            MEGKEEDVR+GAN++ E QPIGTAAQ  D KDY EPPPAPLFEPGEL SWSFYRAGIAEF+ATFLFLYITVLTVMGV+ S SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+F
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGSDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALF 136          

HSP 2 Score: 47.7506 bits (112), Expect = 8.143e-73
Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQK 624
            FYM+MQCLGAICGA VVKGFQK
Sbjct:  136 FYMVMQCLGAICGAGVVKGFQK 157          
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 8.887e-72
Identity = 122/140 (87.14%), Postives = 128/140 (91.43%), Query Frame = 3
Query:  153 MEGKEEDVRVGANRYRESQPIGTAAQT----QDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            MEGKEEDVR+GAN++ E QPIGTAAQ      D KDY EPPPAPLFEPGEL SWSFYRAGIAEFVATFLFLYITVLTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+F
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIF 140          

HSP 2 Score: 45.0542 bits (105), Expect = 8.887e-72
Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQK 624
            FY+IMQCLGAICGA VVKGFQ+
Sbjct:  140 FYIIMQCLGAICGAGVVKGFQQ 161          
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 8.888e-72
Identity = 121/137 (88.32%), Postives = 128/137 (93.43%), Query Frame = 3
Query:  153 MEGKEEDVRVGANRYRESQPIGTAAQ-TQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            MEGKEEDVR+GAN++ E QPIGTAAQ   D KDY EPPPAPLFEPGEL SWSFYRAGIAEFVATFLFLYIT+LTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+F
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALF 137          

HSP 2 Score: 44.669 bits (104), Expect = 8.888e-72
Identity = 18/22 (81.82%), Postives = 21/22 (95.45%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQK 624
            FY+IMQCLGA+CGA VVKGFQ+
Sbjct:  137 FYIIMQCLGAVCGAGVVKGFQQ 158          
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 8.888e-72
Identity = 119/136 (87.50%), Postives = 127/136 (93.38%), Query Frame = 3
Query:  153 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            MEGKEEDVR+GANRY E QPIGTAAQ  + KDY EPPPAPLFE  EL+SWSFYRAGIAEFVATFLFLYI++LTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+F
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGTEEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALF 136          

HSP 2 Score: 46.2098 bits (108), Expect = 8.888e-72
Identity = 19/22 (86.36%), Postives = 21/22 (95.45%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQK 624
            FYM+MQCLGAICGA VVKGFQ+
Sbjct:  136 FYMVMQCLGAICGAGVVKGFQE 157          
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.159e-71
Identity = 118/136 (86.76%), Postives = 128/136 (94.12%), Query Frame = 3
Query:  153 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            MEGKEEDVRVGAN++ E QPIGT+AQ+ D KDY EPPPAPLFEPGELSSWSFYRAGIAEF+ATFLFLYITVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSTD-KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 135          

HSP 2 Score: 48.1358 bits (113), Expect = 1.159e-71
Identity = 21/24 (87.50%), Postives = 21/24 (87.50%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQKKP 630
            FYMIMQCLGAICGA VVKGFQ  P
Sbjct:  135 FYMIMQCLGAICGAGVVKGFQPTP 158          
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.650e-70
Identity = 117/136 (86.03%), Postives = 126/136 (92.65%), Query Frame = 3
Query:  153 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            MEGKEEDVRVGAN++ E QPIGT+AQT   KDY EPPPAP FEPGELSSWSFYRAGIAEF+ATFLFLYITVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQTD--KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 134          

HSP 2 Score: 46.595 bits (109), Expect = 1.650e-70
Identity = 19/24 (79.17%), Postives = 21/24 (87.50%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQKKP 630
            FY++MQCLGAICGA VVKGFQ  P
Sbjct:  134 FYIVMQCLGAICGAGVVKGFQPNP 157          
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 6.222e-70
Identity = 117/136 (86.03%), Postives = 126/136 (92.65%), Query Frame = 3
Query:  153 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            MEGKEEDVR+GANRY E QPIGTAAQ  + KDY EPP AP+FE  EL+SWSFYRAGIAEFVATFLFLYI++LTVMGV+KS SKC+TVGIQGIAW+FGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF
Sbjct:    1 MEGKEEDVRLGANRYTERQPIGTAAQGAEEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 136          

HSP 2 Score: 45.0542 bits (105), Expect = 6.222e-70
Identity = 19/22 (86.36%), Postives = 20/22 (90.91%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQK 624
            FYM MQCLGAICGA VVKGFQ+
Sbjct:  136 FYMAMQCLGAICGAGVVKGFQR 157          
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 8.115e-70
Identity = 115/135 (85.19%), Postives = 127/135 (94.07%), Query Frame = 3
Query:  156 EGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            E KEEDV++GAN++RE+QP+GTAAQT   KDY EPPPAPLFEPGELSSWSFYRAGIAEF+ATFLFLYIT+LTVMG+ +S S CS+VGIQG+AWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF
Sbjct:    3 ENKEEDVKLGANKFRETQPLGTAAQTD--KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 135          

HSP 2 Score: 45.0542 bits (105), Expect = 8.115e-70
Identity = 19/24 (79.17%), Postives = 20/24 (83.33%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQKKP 630
            FYM+MQCLGAICGA VVKGF   P
Sbjct:  135 FYMVMQCLGAICGAGVVKGFMVGP 158          
BLAST of CN182376 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 5.206e-69
Identity = 114/136 (83.82%), Postives = 125/136 (91.91%), Query Frame = 3
Query:  153 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVF 560
            MEGKEEDV VGAN++ E QPIGTAAQT+  KDY EPPPAP FEPGEL SWSFYRAGIAEF+ATFLFLY+TVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRA+F
Sbjct:    1 MEGKEEDVNVGANKFPERQPIGTAAQTES-KDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALF 135          

HSP 2 Score: 44.2838 bits (103), Expect = 5.206e-69
Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 1
Query:  559 FYMIMQCLGAICGAAVVKGFQ 621
            FY++MQCLGAICGA VVKGFQ
Sbjct:  135 FYIVMQCLGAICGAGVVKGFQ 155          
The following BLAST results are available for this feature:
BLAST of CN182376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PIP11_ORYSJ8.143e-7389.78Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_ORYSJ8.143e-7387.50Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP13_MAIZE8.887e-7287.14Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_MAIZE8.888e-7288.32Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP15_MAIZE8.888e-7287.50Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP14_ARATH1.159e-7186.76Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP13_ARATH1.650e-7086.03Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP13_ORYSJ6.222e-7086.03Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP1_SOLLC8.115e-7085.19Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP15_ARATH5.206e-6983.82Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002F20_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002F20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182376 ID=CN182376; Name=CN182376; organism=Citrus sinensis; type=EST; length=642bp
TAAAGCTTCACTACCCTTTGTCCCAAACTCACGTTACAAATACCCCCCGG
CTCCCTCACTCTTAAATCGTGAGCGCGTTGTGCCATTTATTGATTCAATT
CACTCCCAAGAAACTTGAACCTATCTTGTCTATTAATTTTCACAAGAACA
TAATGGAGGGCAAAGAAGAGGATGTAAGAGTGGGAGCAAATAGGTATCGA
GAGAGTCAACCTATTGGAACCGCGGCTCAGACTCAGGATGTGAAGGATTA
CACGGAGCCACCTCCGGCGCCGCTCTTCGAGCCCGGCGAATTATCGTCGT
GGTCCTTTTACAGGGCTGGCATTGCGGAGTTTGTGGCCACGTTCTTGTTT
CTTTACATCACTGTTCTAACAGTGATGGGCGTGTCCAAATCCAAAAGCAA
ATGTTCCACTGTGGGAATCCAGGGCATCGCTTGGGCTTTTGGCGGCATGA
TCTTCGCTCTAGTCTACTGCACTGCTGGCATTTCAGGGGGTCACATTAAC
CCAGCGGTGACATTCGGGCTGTTCTTGGCCCGAAAGCTGTCGCTTACCAG
GGCAGTTTTTTTACATGATAATGCAGTGTTTAGGGGCCATATGCGGTGCG
GCCGTTGTAAAGGGCTTTCAGAAAAAGCCAATATGAAATGCT
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