CN182288

Overview
NameCN182288
Unique NameCN182288
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length463
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.042e-52
Identity = 108/155 (69.68%), Postives = 122/155 (78.71%), Query Frame = 1
Query:    7 SPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAI---NWCTILREGCRKLHGHMEVFWNLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            SPSVTELQVENVTFTPS+QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLE++AVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMI  +    +   + E C  +      F+ ++   + K ++      + E FPPGSSILF
Sbjct:    4 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIW----KFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILF 154          
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 7.006e-41
Identity = 89/155 (57.42%), Postives = 112/155 (72.26%), Query Frame = 1
Query:    7 SPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAINWCTILREGCRKLHGHMEVFW---NLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            S SVTELQVEN TF P+++PPGSTK+ FLGGAGERGLEI+GKF+KFTAIGVYLE++AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMI  +      ++   K+  +    W    ++   + K ++  +   + E FPPGSSILF
Sbjct:    4 SLSVTELQVENFTFPPTVKPPGSTKTLFLGGAGERGLEIQGKFIKFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTG----QQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILF 154          
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.195e-40
Identity = 89/154 (57.79%), Postives = 107/154 (69.48%), Query Frame = 1
Query:   10 PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAINWCTILREGCRKLHGHMEVFW---NLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT I  +      R+   K+  +   FW    ++   + K ++      + E FPPG+SILF
Sbjct:    5 PSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTG----RQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILF 154          
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.195e-40
Identity = 89/154 (57.79%), Postives = 107/154 (69.48%), Query Frame = 1
Query:   10 PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAINWCTILREGCRKLHGHMEVFW---NLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            PSVT +QVENV F PS++PPGST   FLGGAG RGLEI+GKFVKFTAIGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT I  +      R+   K+  +   FW    ++   + K ++      + E FPPG+SILF
Sbjct:    5 PSVTAVQVENVLFPPSVKPPGSTNDLFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTG----RQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILF 154          
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 7.746e-40
Identity = 85/154 (55.19%), Postives = 110/154 (71.43%), Query Frame = 1
Query:   10 PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAINWCTILREGCRKLHGHMEVFW---NLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            PS+  LQVE   F PS++PPGS+ + FLGGAG RGLEI+G FVKFTAIGVYLE+NAVPLLA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT I  +      ++   K+  +   FW    ++   + K ++  +   + + FPPG+SILF
Sbjct:    5 PSLAGLQVEATAFPPSVKPPGSSNTLFLGGAGVRGLEIQGNFVKFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTG----QQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILF 154          
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 7.746e-40
Identity = 81/155 (52.26%), Postives = 112/155 (72.26%), Query Frame = 1
Query:    7 SPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAINWCTILREGCRKLHGHMEVFW---NLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            SPSV ++Q+E+  F P+++PPG++K  FLGGAGERGLEI+GKF+KFTAIGVYLE++A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMI  +      ++   K+  +   +W     +   + K ++  +   + E FPPG SILF
Sbjct:    6 SPSVAQVQIESHVFPPTVKPPGTSKPFFLGGAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTG----QQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILF 156          
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.461e-38
Identity = 84/153 (54.90%), Postives = 106/153 (69.28%), Query Frame = 1
Query:   13 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAINWCTILREGCRKLHGHMEVFW---NLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            SVT++QVEN  F P++ P GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VTMI  +      ++   K+  +    W     +   + + ++  L   R E FPPG+SI+F
Sbjct:    6 SVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTG----KQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMF 154          
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 2.492e-38
Identity = 85/157 (54.14%), Postives = 109/157 (69.43%), Query Frame = 1
Query:    4 ASPSVTELQVENVTFTPSL-QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAI---NWCTILREGCRKLHGHMEVFWNLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            A PSVT LQVENV F P+L +PP S  + FLGGAGERGL I+ KFVKFTAIG+YL++ AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMI  +    +   + E C  +  H+ ++ +     + K +   +   + + FPPGSSILF
Sbjct:    2 ALPSVTALQVENVAFPPTLIKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTD----EEGKAIDKFVSVFKDQTFPPGSSILF 154          
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI3_PETHY (Chalcone--flavonone isomerase C OS=Petunia hybrida GN=CHI3 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 7.250e-38
Identity = 83/153 (54.25%), Postives = 105/153 (68.63%), Query Frame = 1
Query:   13 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAINWCTILREGCRKLHGHMEVFW---NLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            SVT++QVEN  F P++ P GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VT I  +      ++   K+  +    W     +   + + ++  L   R E FPPG+SI+F
Sbjct:    6 SVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTTILPLTG----KQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMF 154          
BLAST of CN182288 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 1.237e-37
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 1
Query:   13 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMIFAINWCTILREGCRKLHGHMEVFW---NLHQMLKPKLLKNSLRSSRIEFFPPGSSILF 462
            SVT +Q+  ++F PS++PPGS  + FLGGAG RG+EI+G FVKFTAIGVYLE+ AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMI  +      ++   K+  +    W    ++   + K ++  +   + + FPPG+SILF
Sbjct:    4 SVTGIQIGGMSFPPSVKPPGSGNTFFLGGAGVRGMEIQGNFVKFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTG----QQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILF 152          
The following BLAST results are available for this feature:
BLAST of CN182288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI1.042e-5269.68Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI_GOSHI7.006e-4157.42Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI2_VITVI1.195e-4057.79Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI1.195e-4057.79Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]
CFI_PYRCO7.746e-4055.19Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI_CAMSI7.746e-4052.26Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI1_PETHY1.461e-3854.90Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]
CFI2_LOTJA2.492e-3854.14Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]
CFI3_PETHY7.250e-3854.25Chalcone--flavonone isomerase C OS=Petunia hybrida... [more]
CFI1_FRAAN1.237e-3752.29Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002D14_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182288 ID=CN182288; Name=CN182288; organism=Citrus sinensis; type=EST; length=463bp
GAGGCCTCACCGTCCGTCACCGAACTGCAGGTCGAGAACGTCACTTTCAC
GCCGTCCCTGCAACCTCCAGGATCAACAAAGTCGCATTTCCTCGGCGGCG
CAGGGGAGAGAGGATTGGAGATTGAAGGGAAGTTCGTGAAGTTCACGGCG
ATAGGAGTGTACTTGGAGGAGAACGCCGTGCCGTTACTCGCCGGCAAATG
GAAGGGGAAGACTGCGGAGGAGTTGACGGAATCCGTTGAGTTCTTCAGAG
ACGTCGTCACAGGTCCCTTTGAGAAATTCATGAAGGTGACAATGATCTTT
GCCATTAACTGGTGCACAATACTCAGAGAAGGTTGCCGAAAATTGCATGG
CCATATGGAAGTTTTTTGGAATTTACACCAGATGCTGAAGCCAAAGCTAT
TGAAAAATTCACTGCGGTCTTCAAGGATTGAATTTTTCCCACCAGGATCC
TCAATTCTCTTTA
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