CN182287

Overview
NameCN182287
Unique NameCN182287
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_CITSI (Chalcone--flavonone isomerase OS=Citrus sinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 5.323e-89
Identity = 166/175 (94.86%), Postives = 171/175 (97.71%), Query Frame = -2
Query:  139 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDKMK 663
            KFT IGVYLE++AVP LAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENC+AIWKFFGIYTDAEAKAIEKFT VFKDEIFPPGSSILFTQS GSLTISFSKDGSIPKDGVAVIE+NLLSEAVLESMIGKNGVSPAAKKSLAER+SALLNVTSDKMK
Sbjct:   48 KFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDKMK 222          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI1_FRAAN (Chalcone--flavonone isomerase 1 OS=Fragaria ananassa GN=CHI1 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.037e-68
Identity = 133/168 (79.17%), Postives = 147/168 (87.50%), Query Frame = -2
Query:  163 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 663
            KFT IGVYLE+ AVP LA KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKDG IP+ G AVIEN LLSE+VLES+IGK GVSP A+KS+A R+S LL
Sbjct:   46 KFTAIGVYLEDKAVPALAVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPDGSLTIGFSKDGCIPEVGNAVIENKLLSESVLESIIGKPGVSPEARKSVATRLSELL 213          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.180e-68
Identity = 131/169 (77.51%), Postives = 147/169 (86.98%), Query Frame = -2
Query:  160 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 663
            KFT IGVYLE+NAVP LA KWKGKTAEEL+ESVEFFRD+VTGPFEKF++VT ILPLTG QYSEKV+ENC+A WK  GIYTDAE KAIEKF  VFKD+ FPPG+SILFTQS  GSLTI FSKD S+P+   AVIEN LLSEAVLES++GK+GVSPAAK+SLA R+S LLN
Sbjct:   48 KFTAIGVYLEDNAVPLLAVKWKGKTAEELSESVEFFRDIVTGPFEKFIQVTTILPLTGQQYSEKVSENCVAFWKSVGIYTDAEGKAIEKFIEVFKDQNFPPGASILFTQSPKGSLTICFSKDASVPEAANAVIENKLLSEAVLESILGKHGVSPAAKRSLAARLSELLN 216          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI2_FRAAN (Chalcone--flavonone isomerase 2 OS=Fragaria ananassa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.968e-67
Identity = 131/168 (77.98%), Postives = 147/168 (87.50%), Query Frame = -2
Query:  163 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 663
            KFT IGVYLE+ AVP L+ KWKGKTAEELTESVEFFR++VTGPFEKF +VTMILPLTG QYSEKV+ENC+AIWK FGIYTDAEAKAIEKF  VFKD+ FPPG+SILFTQS +GSL I  SKDGSIP+ G AVIEN LLSE+VLES+IGK GVSP A+KS+A R+S LL
Sbjct:   46 KFTAIGVYLEDKAVPALSVKWKGKTAEELTESVEFFREIVTGPFEKFTQVTMILPLTGQQYSEKVSENCVAIWKKFGIYTDAEAKAIEKFIEVFKDQTFPPGASILFTQSPNGSLMIGISKDGSIPEVGNAVIENKLLSESVLESIIGKQGVSPEARKSVATRLSELL 213          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 4.385e-67
Identity = 129/168 (76.79%), Postives = 145/168 (86.31%), Query Frame = -2
Query:  163 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALL 663
            KFT IGVYLE++A+P LA KWKGKTAEELT+SV+FFRD+V+GPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAEAKAIEKF  VFKDE FPPG SILFTQS  GSLTI+FSKDGS+P+ G  V+EN  LSEAVLES+IGK+GVSPAAKKSLA R+S LL
Sbjct:   50 KFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLTIAFSKDGSLPETGTVVMENKQLSEAVLESIIGKHGVSPAAKKSLAARMSELL 217          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_GOSHI (Chalcone--flavonone isomerase OS=Gossypium hirsutum GN=CHI PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.406e-65
Identity = 129/169 (76.33%), Postives = 143/169 (84.62%), Query Frame = -2
Query:  160 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 663
            KFT IGVYLE++AV  L  KWKGK+A ELTESVEFFRDVVTG FEKF++VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAIEKF  VFKDE FPPGSSILFT S  GSLTI FSKD S+P+ G  VIEN LL+ +VLES+IGKNGVSPAAK+SLA R+S L N
Sbjct:   48 KFTAIGVYLEDSAVNCLGVKWKGKSAVELTESVEFFRDVVTGDFEKFIRVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIEKFIEVFKDENFPPGSSILFTISGQGSLTIGFSKDSSVPEGGKVVIENKLLANSVLESVIGKNGVSPAAKESLASRLSPLFN 216          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.142e-65
Identity = 127/172 (73.84%), Postives = 146/172 (84.88%), Query Frame = -2
Query:  151 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTS 663
            KFT IGVYLE+NAVP LA KWKGK+A+ELTESVEFFRD+VTGP EKF +VT ILPLTG QYSEKV+ENC+A WK  GIY+DAEAKAIEKF  +FKD+ FPP +S LFTQS  GSLT+SFSKDGSIP+ G AV+EN LLSEAVLES+IGK+GVSP AK++LA R+  LLN  S
Sbjct:   49 KFTAIGVYLEDNAVPSLAVKWKGKSAQELTESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEKFIEIFKDQTFPPAASNLFTQSPLGSLTMSFSKDGSIPEVGNAVLENKLLSEAVLESIIGKHGVSPEAKQNLATRLVQLLNENS 220          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI_CLITE (Chalcone--flavonone isomerase OS=Clitoria ternatea GN=CHI PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.142e-65
Identity = 129/176 (73.30%), Postives = 144/176 (81.82%), Query Frame = -2
Query:  139 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLNVTSDKMK 663
            KFT IG+YL ++A+PFLA KW GK+  ELTESVEFFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAI+KF +VFKDE FPPGSSILFT S  GSL I+FSKDGS       VIEN LLSEAVLESMIGK+GVSPAAK+SLA R+S L     D  K
Sbjct:   48 KFTAIGIYLHDDALPFLAAKWNGKSDHELTESVEFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIDKFVSVFKDETFPPGSSILFTVSPKGSLGITFSKDGST----TTVIENKLLSEAVLESMIGKHGVSPAAKQSLASRLSGLFKAGGDTDK 219          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI2_VITVI (Chalcone--flavonone isomerase 2 OS=Vitis vinifera GN=CHI2 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.360e-65
Identity = 127/167 (76.05%), Postives = 142/167 (85.03%), Query Frame = -2
Query:  166 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 663
            KFT IGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP AKKSLA R+S L
Sbjct:   48 KFTAIGVYLESSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
BLAST of CN182287 vs. ExPASy Swiss-Prot
Match: CFI1_VITVI (Chalcone--flavonone isomerase 1 OS=Vitis vinifera GN=CHI1 PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.360e-65
Identity = 127/167 (76.05%), Postives = 142/167 (85.03%), Query Frame = -2
Query:  166 KFTPIGVYLEENAVPFLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISAL 663
            KFT IGVYLE +AVP LA KWKGKT EEL +SV+FFRDVVTGPFEKF KVT ILPLTG QYS+KV+ENC+A WK  GIYTDAEAKAIEKF  V KDE FPPG+SILFT S  G+LT+SFSKDGS+P+ G AVIEN LL+EAVLES+IGK+GVSP AKKSLA R+S L
Sbjct:   48 KFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTGPFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPGNSILFTHSPLGALTMSFSKDGSLPEVGNAVIENKLLTEAVLESIIGKHGVSPEAKKSLAARLSEL 214          
The following BLAST results are available for this feature:
BLAST of CN182287 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CITSI5.323e-8994.86Chalcone--flavonone isomerase OS=Citrus sinensis G... [more]
CFI1_FRAAN3.037e-6879.17Chalcone--flavonone isomerase 1 OS=Fragaria ananas... [more]
CFI_PYRCO5.180e-6877.51Chalcone--flavonone isomerase OS=Pyrus communis GN... [more]
CFI2_FRAAN1.968e-6777.98Chalcone--flavonone isomerase 2 OS=Fragaria ananas... [more]
CFI_CAMSI4.385e-6776.79Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_GOSHI2.406e-6576.33Chalcone--flavonone isomerase OS=Gossypium hirsutu... [more]
CFI_ELAUM3.142e-6573.84Chalcone--flavonone isomerase OS=Elaeagnus umbella... [more]
CFI_CLITE3.142e-6573.30Chalcone--flavonone isomerase OS=Clitoria ternatea... [more]
CFI2_VITVI5.360e-6576.05Chalcone--flavonone isomerase 2 OS=Vitis vinifera ... [more]
CFI1_VITVI5.360e-6576.05Chalcone--flavonone isomerase 1 OS=Vitis vinifera ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002D14_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002D14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182287 ID=CN182287; Name=CN182287; organism=Citrus sinensis; type=EST; length=664bp
GGAGCTCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAGGAAAGG
ACACTAATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACAACTCTG
CCTTCGCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCATCTTATC
ACTAGTTACATTCAACAGTGCTGATATTCTTTCAGCCAAACTCTTCTTTG
CTGCAGGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACTGCCTCA
GAAAGCAGATTATTCTCTATTACCGCAACACCATCTTTCGGTATTGAACC
GTCTTTGGAGAAGCTGATAGTCAATGATCCTGATGATTGAGTAAAGAGAA
TTGAGGATCCTGGTGGGAAAATTTCATCCTTGAAGACCGCAGTGAATTTT
TCAATAGCTTTGGCTTCAGCATCTGTGTAAATTCCAAAAAACTTCCATAT
GGCCATGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCACCAGTTAATG
GCAAGATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTGACGACG
TCTCTGAAGAACTCAACGGATTCCGTCAACTCCTCCGCAGTCTTCCCCTT
CCATTTGCCGGCGAGAAACGGCACGGCGTTCTCCTCCAAGTACACTCCTA
TCGGCGTGAACTTC
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