CX300708 | Citrus Genome Database

Overview


Name	CX300708
Unique Name	CX300708
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	421

Libraries


Library Name	Type
PhyRootSw1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: KLC_LOLPE (Kinesin light chain OS=Loligo pealeii PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.158e-14
Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDR 372
            +TLGP+H             Y   G+ +++E L K +L I++++LG+DH D  + ++ L LL  +QG+ EE E      LE  +  LG D P    +  +LA AY  QGK+  A++L+ E + R
Sbjct:  294 KTLGPDHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALVIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVERYYQRALEIYQKELGPDDPNVAKTKNNLASAYLKQGKYKQAEILYKEVLTR 417

HSP 2 Score: 74.7146 bits (182), Expect = 1.595e-13
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            Y   GR E +  L K++L   ++  G DH D    ++ L L+Y  QG+ +EA  +L + L  R+  LG D P   +++ +LAV Y  +GK+ DA+ L    +  R+ VLG+DHP
Sbjct:  230 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQGKYKEAANLLNDALGIREKTLGPDHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALVIREKVLGKDHP 343

HSP 3 Score: 67.781 bits (164), Expect = 1.949e-11
Identity = 36/134 (26.87%), Postives = 69/134 (51.49%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            +T G +H             Y   G+ +E+  L  ++L I+++ LG DH     T++ L +LY  +G+ ++AEP+    L  R+ +LG D P     + +LA+  ++QGK+++ +  +   ++  +  LG D P
Sbjct:  252 KTSGHDHPDVATMLNILALVYRDQGKYKEAANLLNDALGIREKTLGPDHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALVIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVERYYQRALEIYQKELGPDDP 385

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BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: KLC_STRPU (Kinesin light chain OS=Strongylocentrotus purpuratus PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.221e-13
Identity = 42/124 (33.87%), Postives = 66/124 (53.23%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDR 372
            +TLGP+H             Y   G+ +E+E L K +L I++++LG+DH D  + ++ L LL  +QG+ EE E      LE  +  LG D P    +  +LA AY  QGK+  A+ L+ + + R
Sbjct:  289 KTLGPDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEWYYQRALEIYEKKLGPDDPNVAKTKNNLAAAYLKQGKYKAAETLYKQVLTR 412

HSP 2 Score: 70.4774 bits (171), Expect = 3.008e-12
Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            Y    R E +  L K++L   ++  G DH D    ++ L L+Y  Q + +EA  +L + L  R+  LG D P   +++ +LAV Y  +GK+ +A+ L    ++ R+ VLG+DHP
Sbjct:  225 YASQSRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAGNLLHDALAIREKTLGPDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHP 338

HSP 3 Score: 68.9366 bits (167), Expect = 8.751e-12
Identity = 37/134 (27.61%), Postives = 70/134 (52.24%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            +T G +H             Y    + +E+  L  ++L+I+++ LG DH     T++ L +LY  +G+ +EAEP+    LE R+ +LG D P     + +LA+  ++QGK+++ +  +   ++  +  LG D P
Sbjct:  247 KTSGHDHPDVATMLNILALVYRDQNKYKEAGNLLHDALAIREKTLGPDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEWYYQRALEIYEKKLGPDDP 380

[Close]

BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: KLC_CAEEL (Kinesin light chain OS=Caenorhabditis elegans GN=klc-2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.083e-13
Identity = 40/114 (35.09%), Postives = 63/114 (55.26%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            Y   GR E +  L K++L   ++  G DH D    ++ L L+Y  Q + +EA  +L E L  R+  LG   P   +++ +LAV +  +GKF DA+ L    ++ R+ VLG+DHP
Sbjct:  216 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEALSIREKCLGESHPAVAATLNNLAVLFGKRGKFKDAEPLCKRALEIREKVLGDDHP 329

HSP 2 Score: 70.0922 bits (170), Expect = 3.928e-12
Identity = 37/134 (27.61%), Postives = 71/134 (52.99%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            +T G +H             Y    + +E+  L  E+LSI+++ LGE H     T++ L +L+  +G+ ++AEP+    LE R+ +LG D P     + +LA+  ++QGK+++ +  +   ++  ++ LG D P
Sbjct:  238 KTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNEALSIREKCLGESHPAVAATLNNLAVLFGKRGKFKDAEPLCKRALEIREKVLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRALEIYESKLGPDDP 371

HSP 3 Score: 67.0106 bits (162), Expect = 3.325e-11
Identity = 37/122 (30.33%), Postives = 63/122 (51.64%), Query Frame = 1

Query:    7 LGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDR 372
            LG  H             +   G+ +++E L K +L I++++LG+DH D  + ++ L LL  +QG+ EE E      LE  +  LG D P    +  +L+ AY  QGK+ +A+ L+ + + R
Sbjct:  282 LGESHPAVAATLNNLAVLFGKRGKFKDAEPLCKRALEIREKVLGDDHPDVAKQLNNLALLCQNQGKYEEVEKYYKRALEIYESKLGPDDPNVAKTKNNLSSAYLKQGKYKEAEELYKQILTR 403

[Close]

BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: KLC2_MOUSE (Kinesin light chain 2 OS=Mus musculus GN=Klc2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.640e-13
Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRK-----AVLGEDHP 402
            +TLG +H             Y   G+ +E+E L K +L I++++LG+ H D  + +S L LL  +QG+ EE E      LE     LG D P    +  +LA  Y  QGK+ DA+ L+ E + R       +V GE+ P
Sbjct:  271 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGENKP 409

HSP 2 Score: 68.9366 bits (167), Expect = 8.751e-12
Identity = 37/114 (32.46%), Postives = 63/114 (55.26%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            Y   GR E +  L K++L   ++  G DH D    ++ L L+Y  Q + ++A  +L + L  R+  LG D P   +++ +LAV Y  +GK+ +A+ L    ++ R+ VLG+ HP
Sbjct:  207 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHP 320

[Close]

BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: KLC1_PONAB (Kinesin light chain 1 OS=Pongo abelii GN=KLC1 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 4.640e-13
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDR 372
            +TLG +H             Y   G+ +E+E L K +L I++++LG+DH D  + ++ L LL  +QG+ EE E      LE  +  LG D P    +  +LA  Y  QGKF  A+ L+ E + R
Sbjct:  287 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 410

HSP 2 Score: 72.4034 bits (176), Expect = 7.915e-13
Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            Y   GR E +  L K++L   ++  G DH D    ++ L L+Y  Q + ++A  +L + L  R+  LG D P   +++ +LAV Y  +GK+ +A+ L    ++ R+ VLG+DHP
Sbjct:  223 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHP 336

HSP 3 Score: 70.4774 bits (171), Expect = 3.008e-12
Identity = 36/134 (26.87%), Postives = 71/134 (52.99%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            +T G +H             Y    + +++  L  ++L+I+++ LG+DH     T++ L +LY  +G+ +EAEP+    LE R+ +LG D P     + +LA+  ++QGK+++ +  +   ++  +  LG D P
Sbjct:  245 KTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDP 378

[Close]

BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: KLC1_HUMAN (Kinesin light chain 1 OS=Homo sapiens GN=KLC1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.640e-13
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDR 372
            +TLG +H             Y   G+ +E+E L K +L I++++LG+DH D  + ++ L LL  +QG+ EE E      LE  +  LG D P    +  +LA  Y  QGKF  A+ L+ E + R
Sbjct:  287 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 410

HSP 2 Score: 72.4034 bits (176), Expect = 7.915e-13
Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            Y   GR E +  L K++L   ++  G DH D    ++ L L+Y  Q + ++A  +L + L  R+  LG D P   +++ +LAV Y  +GK+ +A+ L    ++ R+ VLG+DHP
Sbjct:  223 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHP 336

HSP 3 Score: 70.4774 bits (171), Expect = 3.008e-12
Identity = 36/134 (26.87%), Postives = 71/134 (52.99%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            +T G +H             Y    + +++  L  ++L+I+++ LG+DH     T++ L +LY  +G+ +EAEP+    LE R+ +LG D P     + +LA+  ++QGK+++ +  +   ++  +  LG D P
Sbjct:  245 KTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDP 378

[Close]

BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: KLC_DROME (Kinesin light chain OS=Drosophila melanogaster GN=Klc PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.060e-13
Identity = 39/133 (29.32%), Postives = 70/133 (52.63%), Query Frame = 1

Query:    4 TLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            T G +H             Y    + +E+  L  ++LSI+ + LGE+H     T++ L +LY  +G+ ++AEP+    LE R+ +LG D P     + +LA+  ++QGK+D+ +  +   +D  ++ LG D P
Sbjct:  219 TSGHDHPDVATMLNILALVYRDQNKYKEAANLLNDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDP 351

HSP 2 Score: 72.0182 bits (175), Expect = 1.034e-12
Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            Y   GR E +  L K++L   +   G DH D    ++ L L+Y  Q + +EA  +L + L  R   LG + P   +++ +LAV Y  +GK+ DA+ L    ++ R+ VLG+DHP
Sbjct:  196 YASQGRYEVAVPLCKQALEDLERTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNDALSIRGKTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLGKDHP 309

HSP 3 Score: 68.1662 bits (165), Expect = 1.493e-11
Identity = 36/124 (29.03%), Postives = 65/124 (52.42%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDR 372
            +TLG  H             Y   G+ +++E L K +L I++++LG+DH D  + ++ L LL  +QG+ +E E      L+  +  LG D P    +  +LA  Y  QG++ +A++L+ + + R
Sbjct:  260 KTLGENHPAVAATLNNLAVLYGKRGKYKDAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYDEVEKYYQRALDIYESKLGPDDPNVAKTKNNLAGCYLKQGRYTEAEILYKQVLTR 383

[Close]

BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: KLC1_RAT (Kinesin light chain 1 OS=Rattus norvegicus GN=Klc1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.060e-13
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDR 372
            +TLG +H             Y   G+ +E+E L K +L I++++LG+DH D  + ++ L LL  +QG+ EE E      LE  +  LG D P    +  +LA  Y  QGKF  A+ L+ E + R
Sbjct:  287 KTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 410

HSP 2 Score: 72.4034 bits (176), Expect = 7.915e-13
Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            Y   GR E +  L K++L   ++  G DH D    ++ L L+Y  Q + ++A  +L + L  R+  LG D P   +++ +LAV Y  +GK+ +A+ L    ++ R+ VLG+DHP
Sbjct:  223 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHP 336

HSP 3 Score: 70.0922 bits (170), Expect = 3.928e-12
Identity = 36/134 (26.87%), Postives = 70/134 (52.24%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            +T G +H             Y    + +++  L  ++L+I+++ LG DH     T++ L +LY  +G+ +EAEP+    LE R+ +LG D P     + +LA+  ++QGK+++ +  +   ++  +  LG D P
Sbjct:  245 KTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDP 378

[Close]

BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: KLC2_HUMAN (Kinesin light chain 2 OS=Homo sapiens GN=KLC2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.915e-13
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1

Query:    1 ETLGPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDR 372
            +TLG +H             Y   G+ +E+E L K +L I++++LG+ H D  + +S L LL  +QG+ EE E      LE     LG D P    +  +LA  Y  QGK+ DA+ L+ E + R
Sbjct:  272 KTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 395

HSP 2 Score: 70.0922 bits (170), Expect = 3.928e-12
Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHP 402
            Y   GR E +  L K++L   ++  G DH D    ++ L L+Y  Q + +EA  +L + L  R+  LG D P   +++ +LAV Y  +GK+ +A+ L    ++ R+ VLG+ HP
Sbjct:  208 YASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHP 321

[Close]

BLAST of CX300708 vs. ExPASy Swiss-Prot
Match: NPHP3_XENLA (Nephrocystin-3 OS=Xenopus laevis GN=nphp3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12
Identity = 45/161 (27.95%), Postives = 71/161 (44.10%), Query Frame = 1

Query:   10 GPEHVXXXXXXXXXXXXYDYMGRVEESETLYKESLSIQKE------------------------LLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHPQTIMSI 420
            G EH+            Y    + E++E L K+SL I+++                         LG+D  D   T++ LG+LY  Q   E AE  L   LE R+ +LG D P    S+ +LA  Y ++ ++D A+ L+   +D R+  L  DHP    ++
Sbjct:  993 GSEHLRVARELDALAVLYQKQNKFEQAEQLRKKSLKIRQKSARRKGSMYGFALLRRRALQLEELTLGKDTSDNARTLNELGVLYYLQNNLETAETFLKRSLEMRERVLGADHPDCAQSINNLAALYNEKKQYDKAEELYERALDIRRRALSPDHPSLAYTV 1153

HSP 2 Score: 67.0106 bits (162), Expect = 3.325e-11
Identity = 36/120 (30.00%), Postives = 64/120 (53.33%), Query Frame = 1

Query:   61 YDYMGRVEESETLYKESLSIQKELLGEDHLDTLETMSFLGLLYLSQGRCEEAEPILIECLEKRKDLLGWDSPTTLSSMQSLAVAYRDQGKFDDAKVLFLECIDRRKAVLGEDHPQTIMSI 420
            Y     +E +ET  K SL +++ +LG DH D  ++++ L  LY  + + ++AE +    L+ R+  L  D P+   +++ LAV Y+ +GK D A  L+   +D R+   G  HP    ++
Sbjct: 1076 YYLQNNLETAETFLKRSLEMRERVLGADHPDCAQSINNLAALYNEKKQYDKAEELYERALDIRRRALSPDHPSLAYTVKHLAVLYKRKGKLDKAVPLYELAVDIRQKSFGPKHPSVATAL 1195

The following BLAST results are available for this feature:

BLAST of CX300708 vs. ExPASy Swiss-Prot

BLAST of CX300708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20


Match Name	E-value	Identity	Description
KLC_LOLPE	7.158e-14	33.87	Kinesin light chain OS=Loligo pealeii PE=2 SV=1	[more]
KLC_STRPU	1.221e-13	33.87	Kinesin light chain OS=Strongylocentrotus purpurat...	[more]
KLC_CAEEL	2.083e-13	35.09	Kinesin light chain OS=Caenorhabditis elegans GN=k...	[more]
KLC2_MOUSE	4.640e-13	33.09	Kinesin light chain 2 OS=Mus musculus GN=Klc2 PE=1...	[more]
KLC1_PONAB	4.640e-13	33.87	Kinesin light chain 1 OS=Pongo abelii GN=KLC1 PE=2...	[more]
KLC1_HUMAN	4.640e-13	33.87	Kinesin light chain 1 OS=Homo sapiens GN=KLC1 PE=1...	[more]
KLC_DROME	6.060e-13	29.32	Kinesin light chain OS=Drosophila melanogaster GN=...	[more]
KLC1_RAT	6.060e-13	33.87	Kinesin light chain 1 OS=Rattus norvegicus GN=Klc1...	[more]
KLC2_HUMAN	7.915e-13	33.87	Kinesin light chain 2 OS=Homo sapiens GN=KLC2 PE=1...	[more]
NPHP3_XENLA	2.303e-12	27.95	Nephrocystin-3 OS=Xenopus laevis GN=nphp3 PE=2 SV=...	[more]

Pages

Properties


Property Name	Value
Genbank description	C08001D06SK PhyRootSw1 Citrus sinensis cDNA clone C08001D06, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX300708 ID=CX300708; Name=CX300708; organism=Citrus sinensis; type=EST; length=421bp
GAGACTTTAGGCCCTGAACATGTTCTAACTTTACGATTGATCACTAAATT
AGCTCTATTATATGATTATATGGGGAGAGTAGAAGAATCAGAAACTTTAT
ATAAGGAGAGTTTATCCATTCAGAAGGAGTTATTAGGGGAAGATCATCTT
GATACTTTAGAAACGATGAGTTTCTTAGGATTGCTATATCTTTCTCAAGG
TAGATGCGAAGAAGCTGAACCAATCCTAATTGAATGCTTAGAGAAAAGAA
AAGATCTGTTAGGTTGGGATAGTCCCACTACTCTCAGCTCAATGCAATCC
CTTGCGGTAGCTTATCGAGACCAAGGGAAGTTTGATGATGCCAAAGTATT
ATTTCTCGAATGTATTGATCGAAGAAAGGCTGTATTAGGTGAAGATCATC
CTCAGACGATCATGTCCATCA