CN182277

Overview
NameCN182277
Unique NameCN182277
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length348
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182277 vs. ExPASy Swiss-Prot
Match: ZDH17_ARATH (Probable S-acyltransferase At4g15080 OS=Arabidopsis thaliana GN=At4g15080 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.159e-30
Identity = 60/90 (66.67%), Postives = 67/90 (74.44%), Query Frame = 2
Query:    8 GLQYKGGWCTPPRVFVDYQDEVVPHLEPGMVPSTVDPDAAGVAERGQKVPKRSVRISAWKLAKLDXXXXXXXXXXXXXXXXVLRPVDNRH 277
            GL YKG WCTPPRVFVDYQDEV+PHL+P MVPSTVDPDAA  AERG K+PKR V+ISAWKLAKL+                VLRP++NRH
Sbjct:  348 GLPYKGAWCTPPRVFVDYQDEVIPHLDPRMVPSTVDPDAAETAERGNKIPKRPVKISAWKLAKLNSNEATRAAARARASSSVLRPIENRH 437          
BLAST of CN182277 vs. ExPASy Swiss-Prot
Match: ZDHC8_ARATH (Probable S-acyltransferase At3g22180 OS=Arabidopsis thaliana GN=At3g22180 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 3.771e-23
Identity = 56/94 (59.57%), Postives = 65/94 (69.15%), Query Frame = 2
Query:    8 GLQYKGGWCTPPRVFVDYQDEVVPHLEPGMVPSTVDPDAAGVAERGQKVPKRSVRISAWKLAKLDXXXXXXXXXXXXXXXXVLRPVDNRH-PDS 286
            GL Y+G WCTPPRVF D QDEV+PHL+P MVPSTVDPDA G +E+G K  KR V+ +AWKLAKLD                VLRP+DNRH PD+
Sbjct:  346 GLPYRGVWCTPPRVF-DNQDEVIPHLDPCMVPSTVDPDAPG-SEKGTKALKRPVKRNAWKLAKLDPNEAARAAARARASSSVLRPIDNRHLPDN 437          
BLAST of CN182277 vs. ExPASy Swiss-Prot
Match: ZDHC3_ARATH (Probable S-acyltransferase At2g33640 OS=Arabidopsis thaliana GN=At2g33640 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.588e-13
Identity = 42/91 (46.15%), Postives = 53/91 (58.24%), Query Frame = 2
Query:   11 LQYKGG-WCTPPRVFVDYQDEVVPHLEPGMVPSTVDPDAAGVAERGQKVP--KRSVRISAWKLAKLDXXXXXXXXXXXXXXXXVLRPVDNR 274
            +QY+G   CTPP +FVD QD+V+ HLEPG V ST+DPD+       QK P  ++ VRI+ WKLAKLD                VL PV +R
Sbjct:  321 IQYRGASLCTPPNIFVDQQDDVIQHLEPGPVRSTIDPDSL-----SQKKPPQRQQVRINPWKLAKLDSKEASKAAAKARASSSVLLPVSSR 406          
The following BLAST results are available for this feature:
BLAST of CN182277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ZDH17_ARATH4.159e-3066.67Probable S-acyltransferase At4g15080 OS=Arabidopsi... [more]
ZDHC8_ARATH3.771e-2359.57Probable S-acyltransferase At3g22180 OS=Arabidopsi... [more]
ZDHC3_ARATH1.588e-1346.15Probable S-acyltransferase At2g33640 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0002D06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182277 ID=CN182277; Name=CN182277; organism=Citrus sinensis; type=EST; length=348bp
GCGAGGGGGCCTGCAGTATAAGGGGGGTTGGTGTACCCCTCCTAGGGTAT
TTGTCGATTATCAGGATGAAGTTGTACCCCACTTGGAGCCTGGAATGGTT
CCATCAACTGTTGATCCAGATGCAGCTGGAGTTGCAGAAAGAGGGCAAAA
GGTACCCAAAAGATCTGTTCGTATTAGTGCTTGGAAGCTTGCAAAGTTAG
ATTCCAGTGAGGCCATGAGGGCTGCAGCCAAGGCCAGGGCATCATCGTCT
GTTTTACGGCCTGTTGATAATCGGCATCCCGATTCAAAATTTAGCTCCAG
TGGCAATATGAGTGTCCGAAGTAGTGTTAGCACAGATATGGGAGCAAA
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