CN182272

Overview
NameCN182272
Unique NameCN182272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: LUP2_ARATH (Lupeol synthase 2 OS=Arabidopsis thaliana GN=LUP2 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.079e-70
Identity = 119/188 (63.30%), Postives = 146/188 (77.66%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            VN +LS+Q E GG+ AWEP RA  WLELLNP +FF  V+ E + VECT++ ++A+ LFK+LYP HR K++   I    +FIE  Q PDGSW+G+WGICF Y TWFA+SGL AA KTY +CLA+RK  +F L IQ  DGGWGES+ SCP ++Y+PL+GNRSNLVQT+WAMM LIHAGQ ERDPTPLHRA
Sbjct:  519 VNLLLSLQGEKGGLTAWEPVRAQEWLELLNPTDFFTCVMAEREYVECTSAVIQALVLFKQLYPDHRTKEIIKSIEKGVQFIESKQTPDGSWHGNWGICFIYATWFALSGLAAAGKTYKSCLAVRKGVDFLLAIQEEDGGWGESHLSCPEQRYIPLEGNRSNLVQTAWAMMGLIHAGQAERDPTPLHRA 706          
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: LUP3_ARATH (Camelliol C synthase OS=Arabidopsis thaliana GN=CAMS1 PE=3 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 6.992e-70
Identity = 114/188 (60.64%), Postives = 144/188 (76.60%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            V  +LS+QS+ GGV AWEP R   WLELLNP E F ++++EH+  ECT+S ++A+ LFK+LYP HR +++   I+ A ++IE  Q  DGSWYGSWG+CFTY TWF + GL AA KTY+NCLA+RK   F L  Q ++GGWGESY SCP K+Y+P +G RSNLVQTSWAMM L+HAGQ ERDP+PLHRA
Sbjct:  519 VTILLSLQSKNGGVTAWEPARGQEWLELLNPTEVFADIVVEHEYNECTSSAIQALILFKQLYPNHRTEEINTSIKKAVQYIESIQMLDGSWYGSWGVCFTYSTWFGLGGLAAAGKTYNNCLAMRKGVHFLLTTQKDNGGWGESYLSCPKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRA 706          
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: LUP1_ARATH (Lupeol synthase 1 OS=Arabidopsis thaliana GN=LUP1 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 3.248e-67
Identity = 113/188 (60.11%), Postives = 141/188 (75.00%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            VN +LS+QS  GGV AWEP RA  WLELLNP EF    ++E + VECT+S ++A++LF++LYP HR K++   I  A +FI+D Q PDGSWYG+WG+CF Y TWFA+ GL AA +TY++CLA+R    F L  Q +DGGWGESY SC  ++Y+P +G RSNLVQTSWAMMALIH GQ ERD  PLHRA
Sbjct:  516 VNLLLSLQSGNGGVNAWEPSRAYKWLELLNPTEFMANTMVEREFVECTSSVIQALDLFRKLYPDHRKKEINRSIEKAVQFIQDNQTPDGSWYGNWGVCFIYATWFALGGLAAAGETYNDCLAMRNGVHFLLTTQRDDGGWGESYLSCSEQRYIPSEGERSNLVQTSWAMMALIHTGQAERDLIPLHRA 703          
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: LUP4_ARATH (Beta-amyrin synthase OS=Arabidopsis thaliana GN=BAS PE=2 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 5.540e-67
Identity = 110/188 (58.51%), Postives = 146/188 (77.66%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            VN +LS+QS+ GG+ AWEP  AP WLELLNP E F +++IEH+  ECT+S ++A++LFK+LYP HR  ++  FI+ A++++E+ Q  DGSWYG+WGICFTYGTWFA++GL AA KT+++C AIRK  +F L  Q ++GGWGESY SC  K Y+   G  SN+VQT+WA+M LIH+GQ ERDP PLHRA
Sbjct:  519 VNILLSLQSKNGGMTAWEPAGAPKWLELLNPTEMFSDIVIEHEYSECTSSAIQALSLFKQLYPDHRTTEITAFIKKAAEYLENMQTRDGSWYGNWGICFTYGTWFALAGLAAAGKTFNDCEAIRKGVQFLLAAQKDNGGWGESYLSCSKKIYIAQVGEISNVVQTAWALMGLIHSGQAERDPIPLHRA 706          
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: LUP5_ARATH (Lupeol synthase 5 OS=Arabidopsis thaliana GN=LUP5 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.105e-66
Identity = 112/188 (59.57%), Postives = 139/188 (73.94%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            VN +LS+QSE GG  AWEP RA  W+EL+NP + F   + E +  ECT++ L+A+ +F +LYP HR K++   I  A +FIE  Q  DGSWYGSWGICFTYGTWFA+ GL A  KTY+NCL++R    F L IQ  DGGWGESY SCP ++Y+PL+GNRSN+VQT+WAMMALIHAGQ +RD  PLH A
Sbjct:  519 VNLMLSLQSENGGFTAWEPVRAYKWMELMNPTDLFANAMTEREYTECTSAVLQALVIFNQLYPDHRTKEITKSIEKAVQFIESKQLRDGSWYGSWGICFTYGTWFALCGLAAIGKTYNNCLSMRDGVHFLLNIQNEDGGWGESYMSCPEQRYIPLEGNRSNVVQTAWAMMALIHAGQAKRDLIPLHSA 706          
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: PEN6_ARATH (Pentacyclic triterpene synthase 6 OS=Arabidopsis thaliana GN=PEN6 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 9.778e-64
Identity = 109/188 (57.98%), Postives = 140/188 (74.47%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            VN +L  QS+ GG+  WE  R  +WLE L+P+EF E+ I+EH+ VECT S + A+  F + +P+HR ++V+ FI+NA K+IE  Q PDGSWYG+WG+CF YGT+FA+ GLVAA KTY NC  IRKA +F L+ Q  +GGWGESY SCPNKKY  L+GNR+N+V T  A+M LI  GQMERDP P+HRA
Sbjct:  525 VNLLLYFQSKNGGITVWEAARGRTWLEWLSPVEFMEDTIVEHEYVECTGSAIVALARFLKEFPEHRREEVEKFIKNAVKYIESFQMPDGSWYGNWGVCFMYGTFFAVRGLVAAGKTYQNCEPIRKAVQFILETQNVEGGWGESYLSCPNKKYTLLEGNRTNVVNTGQALMVLIMGGQMERDPLPVHRA 712          
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: PEN4_ARATH (Thalianol synthase OS=Arabidopsis thaliana GN=THAS1 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 6.338e-63
Identity = 107/188 (56.91%), Postives = 141/188 (75.00%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            V+Y+L +QS+ GG+ AW+P    +WLE L+P+EF E+ I+E++ VECT S + A+  F + +P ++  +VK FI  A+K+IED Q  DGSWYG+WG+CF YGT+FA+ GLVAA KTYSNC AIRKA  F L  Q  +GGWGES+ SCP+KKY PLKGN +N+VQT+ A+M LI   QMERDP P+HRA
Sbjct:  524 VDYLLYLQSDNGGIAAWQPVEGKAWLEWLSPVEFLEDTIVEYEYVECTGSAIAALTQFNKQFPGYKNVEVKRFITKAAKYIEDMQTVDGSWYGNWGVCFIYGTFFAVRGLVAAGKTYSNCEAIRKAVRFLLDTQNPEGGWGESFLSCPSKKYTPLKGNSTNVVQTAQALMVLIMGDQMERDPLPVHRA 711          
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: PEN7_ARATH (Putative pentacyclic triterpene synthase 7 OS=Arabidopsis thaliana GN=PEN7 PE=5 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 3.845e-60
Identity = 104/188 (55.32%), Postives = 135/188 (71.81%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            VN +L +QSE GG   WE      WLE L+PIEF EE I+EH+ VECT S +  +  F + +P+HR K+++ FI  A K+IE  Q  DGSWYG+WG+CF Y T+FA+ GLVAA KTY +   IR+A +F LKIQ ++GGWGES+ SCP KKY+ L+GN++N+V T  AMM LI +GQMERDP P+HRA
Sbjct:  385 VNMLLYLQSENGGKAVWERASGKKWLEWLSPIEFMEETILEHEYVECTGSAVVVLTRFMKQFPRHRTKEIETFIAKAVKYIESLQMADGSWYGNWGVCFIYATFFAVRGLVAAGKTYQSYEPIRRAVQFLLKIQNDEGGWGESFLSCPGKKYISLEGNKTNVVNTGQAMMVLIMSGQMERDPLPVHRA 572          
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: PEN5_ARATH (Marneral synthase OS=Arabidopsis thaliana GN=MRN1 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 3.845e-60
Identity = 100/188 (53.19%), Postives = 134/188 (71.28%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            VN+++ +QS+ GG+P WEP     WLE L+P+E  E  ++E + +ECT S +  +  FK+ +P HR K+++  I+   K+IED Q PDGSWYG+WG+CFTYGT FA+ GL AA KT+ N  AIR+A +F L  Q  +GGWGES  SCPNKKY+P KGN +N+V T  AMM L+  GQMERDP+P+HRA
Sbjct:  520 VNFLIYLQSDNGGMPVWEPAPGKKWLEWLSPVEHVENTVVEQEYLECTGSVIAGLVCFKKEFPDHRPKEIEKLIKKGLKYIEDLQMPDGSWYGNWGVCFTYGTLFAVRGLAAAGKTFGNSEAIRRAVQFILNTQNAEGGWGESALSCPNKKYIPSKGNVTNVVNTGQAMMVLLIGGQMERDPSPVHRA 707          
BLAST of CN182272 vs. ExPASy Swiss-Prot
Match: PEN3_ARATH (Probable pentacyclic triterpene synthase 3 OS=Arabidopsis thaliana GN=PEN3 PE=3 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 6.559e-60
Identity = 103/188 (54.79%), Postives = 132/188 (70.21%), Query Frame = 3
Query:    6 VNYILSMQSETGGVPAWEPRRAPSWLELLNPIEFFEEVIIEHDKVECTASTLKAMNLFKELYPKHRAKDVKNFIRNASKFIEDTQKPDGSWYGSWGICFTYGTWFAISGLVAAKKTYSNCLAIRKATEFFLKIQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRA 569
            VN +L MQS  GG+  WE      WLE L+PIEF E+ I+EH+ +ECT S +  +  F + +P HR ++VK FI    K+IE  Q  DGSWYG+WGICF YGT+FA+ GLVAA  TY NC AIR+A  F L IQ  +GGWGES+ SCPNK Y+PL+GN++++V T  A+M LI  GQM+RDP P+HRA
Sbjct:  519 VNMLLYMQSRNGGISIWEAASGKKWLEWLSPIEFIEDTILEHEYLECTGSAIVVLARFMKQFPGHRTEEVKKFITKGVKYIESLQIADGSWYGNWGICFIYGTFFAVRGLVAAGNTYDNCEAIRRAVRFLLDIQNGEGGWGESFLSCPNKNYIPLEGNKTDVVNTGQALMVLIMGGQMDRDPLPVHRA 706          
The following BLAST results are available for this feature:
BLAST of CN182272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LUP2_ARATH1.079e-7063.30Lupeol synthase 2 OS=Arabidopsis thaliana GN=LUP2 ... [more]
LUP3_ARATH6.992e-7060.64Camelliol C synthase OS=Arabidopsis thaliana GN=CA... [more]
LUP1_ARATH3.248e-6760.11Lupeol synthase 1 OS=Arabidopsis thaliana GN=LUP1 ... [more]
LUP4_ARATH5.540e-6758.51Beta-amyrin synthase OS=Arabidopsis thaliana GN=BA... [more]
LUP5_ARATH2.105e-6659.57Lupeol synthase 5 OS=Arabidopsis thaliana GN=LUP5 ... [more]
PEN6_ARATH9.778e-6457.98Pentacyclic triterpene synthase 6 OS=Arabidopsis t... [more]
PEN4_ARATH6.338e-6356.91Thalianol synthase OS=Arabidopsis thaliana GN=THAS... [more]
PEN7_ARATH3.845e-6055.32Putative pentacyclic triterpene synthase 7 OS=Arab... [more]
PEN5_ARATH3.845e-6053.19Marneral synthase OS=Arabidopsis thaliana GN=MRN1 ... [more]
PEN3_ARATH6.559e-6054.79Probable pentacyclic triterpene synthase 3 OS=Arab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002D03_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182272 ID=CN182272; Name=CN182272; organism=Citrus sinensis; type=EST; length=571bp
GAGGTGTTAATTACATACTTTCTATGCAGAGTGAAACTGGTGGAGTACCA
GCCTGGGAACCAAGGAGAGCACCATCATGGTTAGAGTTACTCAATCCTAT
AGAATTCTTTGAGGAAGTTATCATTGAACATGATAAAGTTGAGTGCACTG
CATCGACATTGAAGGCAATGAATTTGTTTAAGGAGTTATATCCGAAACAC
AGGGCAAAAGACGTTAAAAACTTTATCCGGAATGCATCTAAATTTATTGA
AGACACGCAAAAACCTGACGGTTCTTGGTATGGTAGCTGGGGAATCTGCT
TCACGTACGGTACATGGTTTGCAATTTCAGGGCTAGTCGCTGCAAAAAAG
ACTTACAGTAATTGTTTAGCTATTCGCAAAGCAACAGAATTTTTTCTCAA
AATTCAATGCAATGACGGTGGTTGGGGAGAGAGTTACCATTCCTGCCCAA
ACAAGAAATATGTACCTCTGAAAGGAAATCGATCGAATTTAGTACAGACT
TCATGGGCTATGATGGCTTTAATTCATGCTGGACAGATGGAAAGAGATCC
TACTCCTCTTCATCGTGCTGC
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