CN182271

Overview
NameCN182271
Unique NameCN182271
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: LUP3_ARATH (Camelliol C synthase OS=Arabidopsis thaliana GN=CAMS1 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.720e-45
Identity = 81/108 (75.00%), Postives = 94/108 (87.04%), Query Frame = -2
Query:  269 QCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEYRSKFFLP 592
            Q ++GGWGESY SCP K+Y+P +G RSNLVQTSWAMM L+HAGQ ERDP+PLHRAAKLLINSQLE+GDFPQQE+TGAFM NC+ HY  YRN+FP+WALAEYR +  LP
Sbjct:  652 QKDNGGWGESYLSCPKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFPQQEITGAFMKNCLLHYAAYRNIFPVWALAEYRRRVPLP 759          
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: LUP2_ARATH (Lupeol synthase 2 OS=Arabidopsis thaliana GN=LUP2 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.005e-45
Identity = 80/107 (74.77%), Postives = 91/107 (85.05%), Query Frame = -2
Query:  275 IQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEYRSKFF 595
            IQ  DGGWGES+ SCP ++Y+PL+GNRSNLVQT+WAMM LIHAGQ ERDPTPLHRAAKL+I SQLE+GDFPQQE+ G FM  CM HY TYRN+FP+WALAEYR   F
Sbjct:  651 IQEEDGGWGESHLSCPEQRYIPLEGNRSNLVQTAWAMMGLIHAGQAERDPTPLHRAAKLIITSQLENGDFPQQEILGVFMNTCMLHYATYRNIFPLWALAEYRKAAF 757          
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: LUP1_ARATH (Lupeol synthase 1 OS=Arabidopsis thaliana GN=LUP1 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.044e-42
Identity = 78/107 (72.90%), Postives = 88/107 (82.24%), Query Frame = -2
Query:  272 QCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEYRSKFFL 592
            Q +DGGWGESY SC  ++Y+P +G RSNLVQTSWAMMALIH GQ ERD  PLHRAAKL+INSQLE+GDFPQQE+ GAFM  CM HY TYRN FP+WALAEYR   F+
Sbjct:  649 QRDDGGWGESYLSCSEQRYIPSEGERSNLVQTSWAMMALIHTGQAERDLIPLHRAAKLIINSQLENGDFPQQEIVGAFMNTCMLHYATYRNTFPLWALAEYRKVVFI 755          
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: LUP5_ARATH (Lupeol synthase 5 OS=Arabidopsis thaliana GN=LUP5 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.384e-41
Identity = 75/108 (69.44%), Postives = 88/108 (81.48%), Query Frame = -2
Query:  272 IQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEYRSKFFL 595
            IQ  DGGWGESY SCP ++Y+PL+GNRSN+VQT+WAMMALIHAGQ +RD  PLH AAK +I SQLE+GDFPQQEL GA M  CM HY TY+++FP WALAEYR   F+
Sbjct:  651 IQNEDGGWGESYMSCPEQRYIPLEGNRSNVVQTAWAMMALIHAGQAKRDLIPLHSAAKFIITSQLENGDFPQQELLGASMSTCMLHYSTYKDIFPPWALAEYRKAAFI 758          
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: LUP4_ARATH (Beta-amyrin synthase OS=Arabidopsis thaliana GN=BAS PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 5.926e-38
Identity = 70/108 (64.81%), Postives = 84/108 (77.78%), Query Frame = -2
Query:  269 QCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEYRSKFFLP 592
            Q ++GGWGESY SC  K Y+   G  SN+VQT+WA+M LIH+GQ ERDP PLHRAAKL+INSQLE GDFPQQ+ TG F+ NC  HY  YRN+ P+WALAEYR++  LP
Sbjct:  652 QKDNGGWGESYLSCSKKIYIAQVGEISNVVQTAWALMGLIHSGQAERDPIPLHRAAKLIINSQLESGDFPQQQATGVFLKNCTLHYAAYRNIHPLWALAEYRARVSLP 759          
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: PEN7_ARATH (Putative pentacyclic triterpene synthase 7 OS=Arabidopsis thaliana GN=PEN7 PE=5 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 7.244e-36
Identity = 66/102 (64.71%), Postives = 83/102 (81.37%), Query Frame = -2
Query:  290 IQCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEY 595
            IQ ++GGWGES+ SCP KKY+ L+GN++N+V T  AMM LI +GQMERDP P+HRAAK+LINSQ+E+GDFPQQEL G +  N + HYPTYRN+F +WAL  Y
Sbjct:  517 IQNDEGGWGESFLSCPGKKYISLEGNKTNVVNTGQAMMVLIMSGQMERDPLPVHRAAKVLINSQMENGDFPQQELRGVYKMNVLLHYPTYRNIFSLWALTYY 618          
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: LAS1_ARATH (Lanosterol synthase OS=Arabidopsis thaliana GN=LAS1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.614e-35
Identity = 66/98 (67.35%), Postives = 76/98 (77.55%), Query Frame = -2
Query:  287 GGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEYR 580
            GGWGESY SC NK Y  L GN+S++V TSWA++ALI AGQ  RDP PLHR AK LINSQ+EDGD+PQQE+ G F  NCM  Y  YRN+FP+WAL EYR
Sbjct:  653 GGWGESYLSCQNKVYTNLPGNKSHIVNTSWALLALIEAGQASRDPMPLHRGAKSLINSQMEDGDYPQQEILGVFNRNCMISYSAYRNIFPIWALGEYR 750          
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: PEN6_ARATH (Pentacyclic triterpene synthase 6 OS=Arabidopsis thaliana GN=PEN6 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.695e-35
Identity = 66/105 (62.86%), Postives = 80/105 (76.19%), Query Frame = -2
Query:  269 DGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEYRSKFFLP 583
            +GGWGESY SCPNKKY  L+GNR+N+V T  A+M LI  GQMERDP P+HRAAK+LINSQL++GDFPQ+E+ G F  N M HY TYRN+F +WAL  Y     +P
Sbjct:  661 EGGWGESYLSCPNKKYTLLEGNRTNVVNTGQALMVLIMGGQMERDPLPVHRAAKVLINSQLDNGDFPQEEIMGVFKMNVMVHYATYRNIFTLWALTYYTKALRVP 765          
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: PEN4_ARATH (Thalianol synthase OS=Arabidopsis thaliana GN=THAS1 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.046e-34
Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = -2
Query:  290 DGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEY 583
            +GGWGES+ SCP+KKY PLKGN +N+VQT+ A+M LI   QMERDP P+HRAA++LINSQL++GDFPQQE+ G FM   M H+PTYRN F +WAL  Y
Sbjct:  660 EGGWGESFLSCPSKKYTPLKGNSTNVVQTAQALMVLIMGDQMERDPLPVHRAAQVLINSQLDNGDFPQQEIMGTFMRTVMLHFPTYRNTFSLWALTHY 757          
BLAST of CN182271 vs. ExPASy Swiss-Prot
Match: BARS1_ARATH (Baruol synthase OS=Arabidopsis thaliana GN=BARS1 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.043e-34
Identity = 63/101 (62.38%), Postives = 79/101 (78.22%), Query Frame = -2
Query:  290 QCNDGGWGESYHSCPNKKYVPLKGNRSNLVQTSWAMMALIHAGQMERDPTPLHRAAKLLINSQLEDGDFPQQELTGAFMGNCMTHYPTYRNVFPMWALAEY 592
            Q  +GGWGESY SCP KKY+PL GN++N+V T  A+M LI   QM+RDP P+HRAAK+LINSQ+++GDFPQQE+ G F  N M H+PTYRN+F +WAL  Y
Sbjct:  652 QNTEGGWGESYLSCPRKKYIPLIGNKTNVVNTGQALMVLIMGNQMKRDPLPVHRAAKVLINSQMDNGDFPQQEIMGVFKMNVMLHFPTYRNMFTLWALTHY 752          
The following BLAST results are available for this feature:
BLAST of CN182271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
LUP3_ARATH1.720e-4575.00Camelliol C synthase OS=Arabidopsis thaliana GN=CA... [more]
LUP2_ARATH5.005e-4574.77Lupeol synthase 2 OS=Arabidopsis thaliana GN=LUP2 ... [more]
LUP1_ARATH1.044e-4272.90Lupeol synthase 1 OS=Arabidopsis thaliana GN=LUP1 ... [more]
LUP5_ARATH4.384e-4169.44Lupeol synthase 5 OS=Arabidopsis thaliana GN=LUP5 ... [more]
LUP4_ARATH5.926e-3864.81Beta-amyrin synthase OS=Arabidopsis thaliana GN=BA... [more]
PEN7_ARATH7.244e-3664.71Putative pentacyclic triterpene synthase 7 OS=Arab... [more]
LAS1_ARATH1.614e-3567.35Lanosterol synthase OS=Arabidopsis thaliana GN=LAS... [more]
PEN6_ARATH4.695e-3562.86Pentacyclic triterpene synthase 6 OS=Arabidopsis t... [more]
PEN4_ARATH1.046e-3465.31Thalianol synthase OS=Arabidopsis thaliana GN=THAS... [more]
BARS1_ARATH3.043e-3462.38Baruol synthase OS=Arabidopsis thaliana GN=BARS1 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0002D03_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182271 ID=CN182271; Name=CN182271; organism=Citrus sinensis; type=EST; length=596bp
TTTTTTTTTTTTTTTTTACATTAACTCAAATTGATTAATGGGGGTCAAAA
GCCCAATTTATCGTACAAGACTATGAATTACTAATAGAAACATGGTTGAT
CACATCTTCTGTATGAGTACATCATTGCATACCATAATTGTACAGATACT
TTGCCGGGTTTGCATATTACAATGACAATAATTCTTATTGTATGGTATTA
TGGCCTTGATTTTGGCTCACAATTGAGTGAAAGATATTTAGGATATCTTA
AATAGTTTCAAAAATCTTGGGCAAAAAAAACTTTGAGCGGTATTCTGCCA
AAGCCCACATCGGAAACACGTTTCTATATGTTGGATAGTGTGTCATGCAA
TTCCCCATAAAAGCTCCAGTGAGTTCCTGTTGGGGGAAATCGCCGTCTTC
CAGCTGCGAATTTATCAACAGTTTTGCAGCACGATGAAGAGGAGTAGGAT
CTCTTTCCATCTGTCCAGCATGAATTAAAGCCATCATAGCCCATGAAGTC
TGTACTAAATTCGATCGATTTCCTTTCAAAGGTACATATTTCTTGTTTGG
GCAGGAATGGTAACTCTCTCCCCAACCACCGTCATTGCATTGAATT
back to top