CN188959
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 8.159e-43 Identity = 95/142 (66.90%), Postives = 105/142 (73.94%), Query Frame = -1 Query: 265 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 690 GE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD L +LQ KE L+EAN+TLKQR LMEG +N LQ +A+D GYG + Q QGD FFH LECEPTLQIGYQ DPI+V AGPS+NNYM GWLP Sbjct: 115 GEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQR-------------LMEGSTLN-LQWQQNAQDVGYGRQATQTQGDGFFHPLECEPTLQIGYQ-NDPITVGGAGPSVNNYMAGWLP 241
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: MTF1_PEA (MADS-box transcription factor 1 OS=Pisum sativum GN=MTF1 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.625e-41 Identity = 91/145 (62.76%), Postives = 103/145 (71.03%), Query Frame = -1 Query: 265 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGL-KPAQPQGDSFFHA--LECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 690 GE+LGPL+SK+LE+LERQLD SLKQIRSTRTQ+MLD L +LQ KE LL EAN+ L+QR MEGYQ+N+LQLN SAED GYG GD F +ECEPTLQIGY DP SVVTAGPS+NNYM GWLP Sbjct: 117 GEDLGPLSSKDLETLERQLDSSLKQIRSTRTQFMLDQLGDLQRKEHLLCEANRALRQR--------------MEGYQINSLQLNLSAEDMGYGRHHQGHTHGDELFQVQPIECEPTLQIGYHQGDPGSVVTAGPSMNNYMGGWLP 247
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.444e-31 Identity = 80/145 (55.17%), Postives = 98/145 (67.59%), Query Frame = -1 Query: 265 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCG-YGLKPAQPQ--GDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 690 GE+LGPL++KELESLERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ L+L +GYQ+ LQLNP+ E+ YG Q Q +FF LECEP LQIGYQ + AGPS+NNYM GWLP Sbjct: 117 GEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLR-------------LRLADGYQM-PLQLNPNQEEVDHYGRHHHQQQQHSQAFFQPLECEPILQIGYQGQQ--DGMGAGPSVNNYMLGWLP 245
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.444e-31 Identity = 79/144 (54.86%), Postives = 96/144 (66.67%), Query Frame = -1 Query: 268 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQL-NPS-AEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQPADPISVVTAGPSLNNYM-QGWL 690 GE+LGPL SKELE LERQLD SL+QIRSTRTQ+MLD L +LQ +EQ+L EANKTLK+R E Q N Q+ +PS GYG +PAQ G++F+H LECEPTLQIGY ++ TA ++NNYM GWL Sbjct: 113 GEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRR-------------FEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQIGYHSDITMATATAS-TVNNYMPPGWL 242
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.164e-31 Identity = 80/147 (54.42%), Postives = 97/147 (65.99%), Query Frame = -1 Query: 265 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVNTLQLNPSAED--CGYGLKPAQPQGDS---FFHALECEPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 690 GE+LGPL++KELE LERQLD SLKQIR+ RTQ+MLD L +LQ KE++L+E NKTL+ L+L +GYQ+ LQLNP+ ED YG Q Q +S FF LECEP LQ+GYQ + AGPS NNYM GWLP Sbjct: 117 GEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLNETNKTLR-------------LRLADGYQM-PLQLNPNQEDHHVDYGRHDQQQQQNSHHAFFQPLECEPILQMGYQGQQDHG-MEAGPSENNYMLGWLP 248
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.632e-23 Identity = 54/79 (68.35%), Postives = 59/79 (74.68%), Query Frame = -1 Query: 454 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLMEGYQVN 690 GE+LGPLNSKELESLERQLDMSLKQIRSTRTQ MLD LT+ Q KE L+EAN+TLKQR LMEG Q+N Sbjct: 115 GEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTLKQR-------------LMEGSQLN 180 HSP 2 Score: 31.187 bits (69), Expect = 3.632e-23 Identity = 16/31 (51.61%), Postives = 19/31 (61.29%), Query Frame = -2 Query: 342 VQKIVVMGLNQLNLRAIASFTPWNVNPHCKL 434 + K+ M QL LRA+ASF W VN CKL Sbjct: 186 MHKLWAMAGKQLKLRAMASFILWIVNLLCKL 216
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: SEP2_ARATH (Developmental protein SEPALLATA 2 OS=Arabidopsis thaliana GN=SEP2 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22 Identity = 64/149 (42.95%), Postives = 88/149 (59.06%), Query Frame = -1 Query: 268 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR---TMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 690 GE+LGPLNSKELE LERQLD SLKQ+R +TQYMLD L++LQ KE +L +AN+ L + + +RH G G++ ++ YG A QG + +LEC+PTLQIGY ++ ++V G S N Y+ GW+ Sbjct: 114 GEDLGPLNSKELEQLERQLDGSLKQVRCIKTQYMLDQLSDLQGKEHILLDANRALSMKLEDMIGVRHHHIGG-----GWE------GGDQQNIAYGHPQAHSQG--LYQSLECDPTLQIGYSHPVCSEQMAVTVQGQSQQGNGYIPGWM 249
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21 Identity = 65/149 (43.62%), Postives = 85/149 (57.05%), Query Frame = -1 Query: 268 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQR---TMTLRHAAFAGLQLMEGYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQIGYQP---ADPISVVTAGPSL--NNYMQGWL 690 GE+LGPLNSKELE LERQLD SLKQ+RS +TQYMLD L++LQ+KEQ+L E N+ L + + +R G EG + N Y AQ QG + LEC PTLQ+GY ++ I+ T + N Y+ GW+ Sbjct: 114 GEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKLDDMIGVRSHHMGGGGGWEGGEQNVT----------YAHHQAQSQG--LYQPLECNPTLQMGYDNPVCSEQITATTQAQAQQGNGYIPGWM 250
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 63/145 (43.45%), Postives = 88/145 (60.69%), Query Frame = -1 Query: 265 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 690 GE+L L KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++ H G Q+ E G + + P + +G G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 116 GEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249
BLAST of CN188959 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 6.721e-21 Identity = 63/145 (43.45%), Postives = 88/145 (60.69%), Query Frame = -1 Query: 265 GEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRTMTLRHAAFAGLQLME-GYQVNTLQLNPSAEDCGYGLKPAQPQGDSFFHALEC--EPTLQIGYQPADPISVVTAGPSLNNYMQGWLP 690 GE+L L KELESLE+QLD SLK +R+TRT++++D LTELQ KEQ++SEAN+ L+++ H G Q+ E G + + P + +G G+ FFH L+ EPTLQIGY PA+ + + +N YM WLP Sbjct: 116 GEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRKEQMVSEANRCLRRKLEESNHV--RGQQVWEQGCNLIGYERQPEVQQPLHG-------GNGFFHPLDAAGEPTLQIGY-PAEHHEAMNSA-CMNTYMPPWLP 249 The following BLAST results are available for this feature:
BLAST of CN188959 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188959 ID=CN188959; Name=CN188959; organism=Citrus sinensis; type=EST; length=690bpback to top |