CN182165

Overview
NameCN182165
Unique NameCN182165
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDI1_SCHPO (Putative protein disulfide-isomerase C1F5.02 OS=Schizosaccharomyces pombe GN=SPAC1F5.02 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.490e-22
Identity = 57/119 (47.90%), Postives = 80/119 (67.23%), Query Frame = -2
Query:  413 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASI-PFKIQKPT-SAPKTE 763
            +NFD+IV+DE+KDVL+E YAPWCGHC+   PTY KLA+      ++V+AK+D T N+   + S GFPTI+FF A +K  +P+  + DRT+  L  F+ K+AS  P K +K +  AP  E
Sbjct:  363 DNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDISVSIS-GFPTIMFFKANDK-VNPVRYEGDRTLEDLSAFIDKHASFEPIKKEKESVPAPDLE 479          
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDIA4_HUMAN (Protein disulfide-isomerase A4 OS=Homo sapiens GN=PDIA4 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.236e-21
Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = -2
Query:  458 FDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVD-VDRTVVALYKFLKKNAS 757
            FD IV+D  KDVL+E YAPWCGHC+  EP YN LAK  +G   +VIAKMD T N+    R K +GFPTI F P+G+K  +P+  +  DR +  L KF++++A+
Sbjct:  535 FDSIVMDPKKDVLIEFYAPWCGHCKQLEPVYNSLAKKYKGQKGLVIAKMDATANDVPSDRYKVEGFPTIYFAPSGDKK-NPVKFEGGDRDLEHLSKFIEEHAT 636          
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDIA4_BOVIN (Protein disulfide-isomerase A4 OS=Bos taurus GN=PDIA4 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.043e-20
Identity = 49/102 (48.04%), Postives = 66/102 (64.71%), Query Frame = -2
Query:  458 FDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 757
            FD IV+D  KDVL+E YAPWCGHC+  EP Y  L K  +G  ++VIAKMD T N+    R K +GFPTI F P+G+K       D +R +  L KF++++A+
Sbjct:  533 FDSIVMDPKKDVLIEFYAPWCGHCKQLEPVYTSLGKKYKGHKNLVIAKMDATANDVTSDRYKVEGFPTIYFAPSGDKKKPIKFEDGNRDLEHLSKFIEEHAT 634          
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDIA3_BOVIN (Protein disulfide-isomerase A3 OS=Bos taurus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.043e-20
Identity = 57/122 (46.72%), Postives = 74/122 (60.66%), Query Frame = -2
Query:  398 NFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 760
            NFDEIV +E+KDVL+E YAPWCGHC+  EP Y +L + LR   +IVIAKMD T N+     +  GFPTI F PA NK  +P   +  R +     +LK+ A+ P  IQ+    PK +K   E
Sbjct:  385 NFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPA-NKKQNPKKYEGGRELSDFISYLKREATNPPVIQE--EKPKKKKKAQE 503          
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDI2_CAEEL (Protein disulfide-isomerase 2 OS=Caenorhabditis elegans GN=pdi-2 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.043e-20
Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = -2
Query:  464 NFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNEHHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKN 760
            NF+++  D +K+VL+E YAPWCGHC+   PT++KL +     +SIVIAKMD T NE    K   FPTI FFPAG+     ++   DRT+    KFL+ N
Sbjct:  372 NFEQVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKFADDESIVIAKMDSTLNEVEDVKIQSFPTIKFFPAGSNKV--VDYTGDRTIEGFTKFLETN 468          
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDIA4_CAEEL (Probable protein disulfide-isomerase A4 OS=Caenorhabditis elegans GN=C14B9.2 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.975e-20
Identity = 53/108 (49.07%), Postives = 73/108 (67.59%), Query Frame = -2
Query:  446 NNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVD-SIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFK 763
            +NFD+IV DESKDVL+E YAPWCGHC++FE  Y +LA+ L+    ++V+AKMD T N+   +   +GFPTI F PAG KS +PI    +R +  L KF+ K+    F+
Sbjct:  507 SNFDKIVNDESKDVLIEFYAPWCGHCKSFESKYVELAQALKKTQPNVVLAKMDATINDAPSQFAVEGFPTIYFAPAGKKS-EPIKYSGNRDLEDLKKFMTKHGVKSFQ 613          
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDIA4_RAT (Protein disulfide-isomerase A4 OS=Rattus norvegicus GN=Pdia4 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 6.780e-20
Identity = 50/103 (48.54%), Postives = 68/103 (66.02%), Query Frame = -2
Query:  458 FDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVD-VDRTVVALYKFLKKNAS 757
            FD IV+D  KDVL+E YAPWCGHC+  EP Y  L K  +G   +VIAKMD T N+  + R K +GFPTI F P+G+K  +PI  +  +R +  L KF+ ++A+
Sbjct:  533 FDAIVMDPKKDVLIEFYAPWCGHCKQLEPVYTSLGKKYKGQKDLVIAKMDATANDITNDRYKVEGFPTIYFAPSGDKK-NPIKFEGGNRDLEHLSKFIDEHAT 634          
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDIA3_CHICK (Protein disulfide-isomerase A3 OS=Gallus gallus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.855e-20
Identity = 55/122 (45.08%), Postives = 70/122 (57.38%), Query Frame = -2
Query:  398 NFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 760
            NFDEIV  E KDVL+E YAPWCGHC+  EP Y +L + L    +IVIAKMD T N+     +  GFPTI F PAG K   P   +  R V     +LK+ A+    +Q+   A K++K   E
Sbjct:  383 NFDEIVNAEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFAPAGKKQ-SPKKYEGGREVSDFISYLKREATSTPVLQEEDKAKKSKKKAKE 503          
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDIA3_PONAB (Protein disulfide-isomerase A3 OS=Pongo abelii GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.973e-19
Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = -2
Query:  398 NFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 760
            NFDEIV +E+KDVL+E YAPWCGHC+  EP Y +L + L    +IVIAKMD T N+     +  GFPTI F PA NK  +P   +  R +     +L++ A+ P  IQ+    PK +K   E
Sbjct:  385 NFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPA-NKKLNPKKYEGGRELSDFISYLQREATNPPVIQE--EKPKKKKKAQE 503          
BLAST of CN182165 vs. ExPASy Swiss-Prot
Match: PDIA3_HUMAN (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 96.2857 bits (238), Expect = 1.973e-19
Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = -2
Query:  398 NFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 760
            NFDEIV +E+KDVL+E YAPWCGHC+  EP Y +L + L    +IVIAKMD T N+     +  GFPTI F PA NK  +P   +  R +     +L++ A+ P  IQ+    PK +K   E
Sbjct:  385 NFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPA-NKKLNPKKYEGGRELSDFISYLQREATNPPVIQE--EKPKKKKKAQE 503          
The following BLAST results are available for this feature:
BLAST of CN182165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
PDI1_SCHPO2.490e-2247.90Putative protein disulfide-isomerase C1F5.02 OS=Sc... [more]
PDIA4_HUMAN1.236e-2150.49Protein disulfide-isomerase A4 OS=Homo sapiens GN=... [more]
PDIA4_BOVIN3.043e-2048.04Protein disulfide-isomerase A4 OS=Bos taurus GN=PD... [more]
PDIA3_BOVIN3.043e-2046.72Protein disulfide-isomerase A3 OS=Bos taurus GN=PD... [more]
PDI2_CAEEL3.043e-2047.47Protein disulfide-isomerase 2 OS=Caenorhabditis el... [more]
PDIA4_CAEEL3.975e-2049.07Probable protein disulfide-isomerase A4 OS=Caenorh... [more]
PDIA4_RAT6.780e-2048.54Protein disulfide-isomerase A4 OS=Rattus norvegicu... [more]
PDIA3_CHICK8.855e-2045.08Protein disulfide-isomerase A3 OS=Gallus gallus GN... [more]
PDIA3_PONAB1.973e-1945.08Protein disulfide-isomerase A3 OS=Pongo abelii GN=... [more]
PDIA3_HUMAN1.973e-1945.08Protein disulfide-isomerase A3 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002A17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002A17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182165 ID=CN182165; Name=CN182165; organism=Citrus sinensis; type=EST; length=764bp
GAGGGAGACATCTTTGATTAGCGAAAATGGTTACCAGAATGAGGAATTAT
TCAATAAGCAGGGAACAAAGGGCAGAAAATTCAGCAGAAACAAAACCTCA
ATGATGATACATTTCTCTTCAGAATGAAATGAAAAAAAATAAAAAAAGAG
GCGCGGTGTTTGAGGTTTTTGAACGATCAGAAATTCATAGATTCTGTTCT
ACTCTCCCACTCTATATATTCAACTATATGATAAATATTTCTTTCTAGTA
CCTGATGACTGATAAAAGGTACATAATTTAGCATTACACCCGTTGTATAT
CATCTTCCTTGTTTTAGGCAAGTTACAATTCGTCCTTCACATCTTTGTCG
CTACTGCTCTCGTGGCTCTCTTTGATATCTGAGGACTCAGCTTTTGGTTC
TGAAGTTGGTTTCTCCGTCTTGGGTGCTGATGTTGGCTTCTGGATTTTAA
AGGGGATTGAAGCATTTTTCTTAAGAAACTTGTACAATGCCACCACAGTA
CGGTCAACATCTACATTGATAGGATCAAAACTCTTGTTTCCAGCTGGGAA
GAAAAGAATTGTTGGGAATCCATCAGACTTTGCCCTGTGATGTTCATTTG
TCGTGCCATCCATCTTAGCGATAACAATAGAATCAACGCCACGTAGATGT
TTGGCCAGTTTGTTGTAGGTTGGCTCGAAGGCTTGGCAATGCCCACACCA
AGGGGCATAGATCTCCAGAAGAACATCCTTTGACTCATCCAAGACAATTT
CATCAAAGTTATTT
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