CN182157

Overview
NameCN182157
Unique NameCN182157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN182157 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.779e-17
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = -3 
Query:  555 SGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQHARNK 710
            +GFDLLNRLLTYDPEKRI+ +DALNH WFRE+PLP+SKDFMPTFP  + +++
Sbjct:  612 AGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPALNEQDR 663
[Close]
BLAST of CN182157 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.779e-17
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = -3 
Query:  555 SGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFPPQHARNK 710
            +GFDLLNRLLTYDPEKRI+ +DALNH WFRE+PLP+SKDFMPTFP  + +++
Sbjct:  612 AGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPALNEQDR 663
[Close]
BLAST of CN182157 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSJ (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = -3 
Query:  576 SGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFP 710
            +GFDLLN LLTYDPEKR++ D AL H WFREVPLPKSKDFMPTFP
Sbjct:  628 AGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFP 672
[Close]
BLAST of CN182157 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSI (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica GN=CDKG-2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.844e-16
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = -3 
Query:  576 SGFDLLNRLLTYDPEKRITVDDALNHYWFREVPLPKSKDFMPTFP 710
            +GFDLLN LLTYDPEKR++ D AL H WFREVPLPKSKDFMPTFP
Sbjct:  628 AGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFP 672
The following BLAST results are available for this feature:
BLAST of CN182157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CDKG1_ORYSJ2.779e-1773.08Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSI2.779e-1773.08Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG2_ORYSJ6.844e-1682.22Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDKG2_ORYSI6.844e-1682.22Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0002A13_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182157 ID=CN182157; Name=CN182157; organism=Citrus sinensis; type=EST; length=712bp
GAGGCACTGCTAAATGCATCAATTCCTCGTTGGTCACTAATAAATAACAT
TTTCAGTATTCAGTTTTTCTCCCTCTCAATAATCTAACCAGAATACGTAC
AAAGAAATGATTCAGTGAAACTGGGGGGAAACCATGACTCAAGCAAAGAG
ACAAGCTCCATACACATAGAGGCTTGGGGATTAAAGTCAGAAGCCCAAAG
GAATGTCCATTTCTTTCCCTTGTCTCTTCACACTGAACAGGTAGCTGTTA
CATTTCTATGTACATCAGGATTCGCAAGACATTAGTATAAAATTCAATAT
TCCTAGCAAAGATCAGAAAAGGAAAAAAAATGAAATCATACTTGCGTCCC
AATCAGGCTTCTATGCAGTTGGGTCATCCGTGCAATTAATAGAAGAGCCT
CTTCAATGACATGCCACAGAAAACATGCACTTGTATCGACTGTCACCAAT
GTGCAATCTCTGAATCCAGACTCTCAGTATGCCTCTTCAACAACATTCTT
GATCGAAAAGTTATCTGGATTATGTAATGCCACGTTCAGTCATATCATCA
GCTACTTGTTCCTAGCATGCTGGGGGGGAAAGGTAGGCATAAAGTCCTTG
GATTTGGGAAGAGGAACCTCACGGAACCAATAATGATTAAGGGCATCATC
TACTGTTATTCGCTTCTCAGGGTCATAAGTCAAAAGTCTGTTTAACAAAT
CAAATCCAGACT
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