CN182155

Overview
NameCN182155
Unique NameCN182155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN182155 vs. ExPASy Swiss-Prot
Match: ATXR2_ARATH (Histone-lysine N-methyltransferase ATXR2 OS=Arabidopsis thaliana GN=ATXR2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.971e-33
Identity = 74/143 (51.75%), Postives = 97/143 (67.83%), Query Frame = 1 
Query:   85 MEIVCPIDEKCASEVSCLLRPPSPLQVQEYFDQLISTRNCHGIKVKQISERGKGVYAGMDFQEEELVLKDQMLAGNQHSSNKMDCLVCSFCFRFIGSIELQIGRRLYLQSLGDSANDKCHMGSSSHASEDCXHTDSSDMEDGS 513
            M+ V   DE  A++V+ LL P    Q+QEYF++LI++R C+GI+VK     GKGVYA  +F E+EL+LKD++L G QHSSNK+DCLVCSFCFRFIGSIE QIGR+LY ++LG S    C    SS   E   +  + +   GS
Sbjct:    1 MDSVYKTDENFAADVAALLAPLPTPQLQEYFNKLITSRRCNGIEVKNNGTIGKGVYANSEFDEDELILKDEILVGIQHSSNKVDCLVCSFCFRFIGSIEKQIGRKLYFKNLGVSG---CCDDDSSEEDECVKYNGNEEQCGGS 140
The following BLAST results are available for this feature:
BLAST of CN182155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ATXR2_ARATH1.971e-3351.75Histone-lysine N-methyltransferase ATXR2 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0002A12_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182155 ID=CN182155; Name=CN182155; organism=Citrus sinensis; type=EST; length=525bp
GAGGTTTAGGCTTCAGTGCACGAGTGAGAAGTAAGAGAAGAGGCTTTTTA
CTTTTAGGCTTCAGTTGGTTGGTTCCATTACAGGATGGAAATTGTTTGCC
CGATCGACGAAAAGTGCGCAAGTGAAGTCTCTTGTCTTCTGCGACCTCCT
TCACCTCTTCAAGTCCAGGAGTACTTCGACCAGCTTATTTCCACTAGAAA
TTGCCATGGCATTAAAGTTAAACAAATTAGTGAGCGTGGAAAGGGTGTCT
ATGCTGGCATGGACTTTCAAGAAGAGGAACTTGTTTTGAAGGACCAAATG
CTTGCCGGAAATCAGCATTCTTCAAACAAGATGGATTGTCTTGTGTGCAG
CTTTTGTTTTCGATTTATTGGTTCTATAGAACTTCAAATTGGGCGGAGAC
TGTATTTGCAAAGCCTAGGTGACTCTGCAAATGATAAATGTCATATGGGG
TCCTCTTCACATGCATCGGAAGATTGTTANCATACTGATTCATCCGACAT
GGAGGACGGTTCTTACATGAAAAAT
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