CN182152

Overview
NameCN182152
Unique NameCN182152
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KADC2_ARATH (Probable adenylate kinase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g47840 PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 8.703e-80
Identity = 149/199 (74.87%), Postives = 170/199 (85.43%), Query Frame = 3
Query:  117 TPTNHGLSLRYDGNPLRCRHRRSSQSPN--AANFQVLASATVEPLKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPETDEIAARLTKRFD 707
            +P+    SL  D      RHRR S+SP+  A  FQ++A+   EPLKIMISGAPASGKGTQCELI  KYGLVHI+AGDLLRAEIA+GSENG+RAKEHMEKGQLVPDEIVV MVK+RLSQ DS++ GWLLDGYPRS SQATALK +GFQPDLFI+LEVPE+ L+ERVVGR+LDPVTGKIYH+KYSPPET+EIA RLT+RFD
Sbjct:   21 SPSRSSFSLSGDALHSLYRHRRVSRSPSIIAPKFQIVAAEKSEPLKIMISGAPASGKGTQCELITHKYGLVHISAGDLLRAEIASGSENGRRAKEHMEKGQLVPDEIVVMMVKDRLSQTDSEQKGWLLDGYPRSASQATALKGFGFQPDLFIVLEVPEEILIERVVGRRLDPVTGKIYHLKYSPPETEEIAVRLTQRFD 219          
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KADC_MAIZE (Adenylate kinase, chloroplastic OS=Zea mays GN=ADK1 PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.393e-69
Identity = 129/160 (80.62%), Postives = 143/160 (89.38%), Query Frame = 3
Query:  228 ATVEPLKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPETDEIAARLTKRFD 707
            A  +PLK+MISGAPASGKGTQCELIK KY L HI+AGDLLRAEIAAGSENGKRAKE MEKGQLVPDEIVV MVKERL QPD+QENGWLLDGYPRS SQA AL+    +PD FILL+VP++ LVERVVGR+LDPVTGKIYH+KYSPPE +EIA+RLT+RFD
Sbjct:    1 ALADPLKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQRFD 160          
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KAD_YERE8 (Adenylate kinase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=adk PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.241e-38
Identity = 70/145 (48.28%), Postives = 112/145 (77.24%), Query Frame = 3
Query:  243 LKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPETDE 677
            ++I++ GAP +GKGTQ + I EKYG+  I+ GD+LRA + AGSE G +AKE M+ G+LV DE+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP+D +VER+VGR++   +G++YHVK++PP+ ++
Sbjct:    1 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQDDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDDLIVERIVGRRVHAASGRVYHVKFNPPKVED 144          
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KAD_CITK8 (Adenylate kinase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=adk PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.076e-37
Identity = 73/159 (45.91%), Postives = 116/159 (72.96%), Query Frame = 3
Query:  243 LKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPET----DEIAARLTKRFD 707
            ++I++ GAP +GKGTQ + I EKYG+V I+ GD+LRA + +GSE GK+AK+ M+ G+LV DE+V+ +VKER++Q D + NG+LLDG+PR++ QA A+K+ G   D  +  +VP++ +V+R+VGR++   +G++YH+K++PP+     D     LT R D
Sbjct:    1 MRIILLGAPGAGKGTQAQFIMEKYGIVQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQDDCR-NGFLLDGFPRTIPQADAMKEAGIAVDYVLEFDVPDELIVDRIVGRRVHAASGRVYHIKFNPPKVEGKDDVTGEELTTRKD 158          
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KAD_SERP5 (Adenylate kinase OS=Serratia proteamaculans (strain 568) GN=adk PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.406e-37
Identity = 70/144 (48.61%), Postives = 111/144 (77.08%), Query Frame = 3
Query:  243 LKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPETD 674
            ++I++ GAP +GKGTQ + I EKYG+  I+ GD+LRA + AGSE GK+AKE M+ G+LV DE+V+ +VKER++Q D + NG+LLDG+PR++ QA A+K+ G   D  +  +VP++ +V+R+VGR++   +G++YHVK++PP+ +
Sbjct:    1 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGKQAKEIMDAGKLVTDELVIALVKERITQEDCR-NGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVE 143          
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KAD_YERPY (Adenylate kinase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=adk PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37
Identity = 69/145 (47.59%), Postives = 112/145 (77.24%), Query Frame = 3
Query:  243 LKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPETDE 677
            ++I++ GAP +GKGTQ + I EKYG+  I+ GD+LRA + AGSE G +AKE M+ G+LV DE+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGR++   +G++YHVK++PP+ ++
Sbjct:    1 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVED 144          
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KAD_YERPS (Adenylate kinase OS=Yersinia pseudotuberculosis GN=adk PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37
Identity = 69/145 (47.59%), Postives = 112/145 (77.24%), Query Frame = 3
Query:  243 LKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPETDE 677
            ++I++ GAP +GKGTQ + I EKYG+  I+ GD+LRA + AGSE G +AKE M+ G+LV DE+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGR++   +G++YHVK++PP+ ++
Sbjct:    1 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVED 144          
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KAD_YERPP (Adenylate kinase OS=Yersinia pestis (strain Pestoides F) GN=adk PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37
Identity = 69/145 (47.59%), Postives = 112/145 (77.24%), Query Frame = 3
Query:  243 LKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPETDE 677
            ++I++ GAP +GKGTQ + I EKYG+  I+ GD+LRA + AGSE G +AKE M+ G+LV DE+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGR++   +G++YHVK++PP+ ++
Sbjct:    1 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVED 144          
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KAD_YERPN (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=adk PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37
Identity = 69/145 (47.59%), Postives = 112/145 (77.24%), Query Frame = 3
Query:  243 LKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPETDE 677
            ++I++ GAP +GKGTQ + I EKYG+  I+ GD+LRA + AGSE G +AKE M+ G+LV DE+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGR++   +G++YHVK++PP+ ++
Sbjct:    1 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVED 144          
BLAST of CN182152 vs. ExPASy Swiss-Prot
Match: KAD_YERPG (Adenylate kinase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=adk PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.398e-37
Identity = 69/145 (47.59%), Postives = 112/145 (77.24%), Query Frame = 3
Query:  243 LKIMISGAPASGKGTQCELIKEKYGLVHIAAGDLLRAEIAAGSENGKRAKEHMEKGQLVPDEIVVTMVKERLSQPDSQENGWLLDGYPRSLSQATALKKYGFQPDLFILLEVPEDTLVERVVGRKLDPVTGKIYHVKYSPPETDE 677
            ++I++ GAP +GKGTQ + I EKYG+  I+ GD+LRA + AGSE G +AKE M+ G+LV DE+V+ +VKER++Q D ++ G+LLDG+PR++ QA A+K+ G + D  +  +VP++ +VER+VGR++   +G++YHVK++PP+ ++
Sbjct:    1 MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGLKAKEIMDAGKLVTDELVIALVKERITQEDCRD-GFLLDGFPRTIPQADAMKEAGIKVDYVLEFDVPDELIVERIVGRRVHAASGRVYHVKFNPPKVED 144          
The following BLAST results are available for this feature:
BLAST of CN182152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KADC2_ARATH8.703e-8074.87Probable adenylate kinase 2, chloroplastic OS=Arab... [more]
KADC_MAIZE1.393e-6980.63Adenylate kinase, chloroplastic OS=Zea mays GN=ADK... [more]
KAD_YERE88.241e-3848.28Adenylate kinase OS=Yersinia enterocolitica seroty... [more]
KAD_CITK81.076e-3745.91Adenylate kinase OS=Citrobacter koseri (strain ATC... [more]
KAD_SERP51.406e-3748.61Adenylate kinase OS=Serratia proteamaculans (strai... [more]
KAD_YERPY2.398e-3747.59Adenylate kinase OS=Yersinia pseudotuberculosis se... [more]
KAD_YERPS2.398e-3747.59Adenylate kinase OS=Yersinia pseudotuberculosis GN... [more]
KAD_YERPP2.398e-3747.59Adenylate kinase OS=Yersinia pestis (strain Pestoi... [more]
KAD_YERPN2.398e-3747.59Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]
KAD_YERPG2.398e-3747.59Adenylate kinase OS=Yersinia pestis bv. Antiqua (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_0002A11_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182152 ID=CN182152; Name=CN182152; organism=Citrus sinensis; type=EST; length=709bp
TGATTAGCAGCAGCAGCACCGTAAATTTGCCAATGACTGTGAAAACCAAC
TCTTTCTCTACTTCTCCCTCTTCTTCAATCAACTCCAAACACATTCTCCC
TTCGCAGCTACCATTTACTCCGACCAATCACGGCCTCTCCCTCCGATATG
ACGGAAACCCACTTCGCTGCCGCCACCGGAGGTCGTCGCAGTCGCCCAAC
GCCGCGAATTTCCAGGTGTTGGCATCAGCAACAGTGGAGCCTTTGAAGAT
TATGATATCTGGAGCTCCTGCTTCTGGTAAAGGTACTCAATGTGAGCTCA
TCAAAGAGAAATATGGCTTGGTGCATATTGCGGCTGGAGATTTACTAAGG
GCTGAAATTGCTGCTGGAAGTGAAAATGGAAAGCGTGCAAAGGAACACAT
GGAGAAAGGACAGTTGGTACCTGACGAAATTGTTGTCACGATGGTGAAGG
AGCGTCTTTCACAGCCAGATTCTCAAGAAAATGGCTGGCTTTTGGATGGA
TATCCTAGAAGCTTATCTCAGGCAACTGCTCTGAAAAAATATGGTTTCCA
GCCTGATCTTTTCATTCTATTAGAAGTCCCAGAAGATACTCTTGTTGAGA
GAGTAGTGGGTCGTAAGTTGGATCCTGTAACTGGGAAAATATACCACGTG
AAGTACTCTCCACCAGAAACTGATGAAATAGCTGCTAGGCTGACCAAACG
TTTTGATGA
back to top