CN182151

Overview
NameCN182151
Unique NameCN182151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length410
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO_TOBAC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Nicotiana tabacum GN=PSBO PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.753e-30
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = -3 
Query:  151 KNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 321
            KNTSSSTGKITLSVT+SKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE
Sbjct:  276 KNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 332

HSP 2 Score: 32.3426 bits (72), Expect = 7.753e-30
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -1 
Query:  366 GGSTGYDNAIALPA 407
            GGSTGYDNA+ALPA
Sbjct:  248 GGSTGYDNAVALPA 261

HSP 3 Score: 24.2534 bits (51), Expect = 7.753e-30
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = -2 
Query:  320 GDEEDLAKENIK 355
            GDEE+L KEN+K
Sbjct:  265 GDEEELQKENVK 276
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO_SOLLC (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum lycopersicum GN=PSBO PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 8.135e-29
Identity = 54/57 (94.74%), Postives = 56/57 (98.25%), Query Frame = -3 
Query:  151 KNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 321
            KNT+S TGKITLSVT+SKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE
Sbjct:  273 KNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 329

HSP 2 Score: 32.3426 bits (72), Expect = 8.135e-29
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -1 
Query:  366 GGSTGYDNAIALPA 407
            GGSTGYDNA+ALPA
Sbjct:  245 GGSTGYDNAVALPA 258

HSP 3 Score: 24.2534 bits (51), Expect = 8.135e-29
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = -2 
Query:  320 GDEEDLAKENIK 355
            GDEE+L KEN+K
Sbjct:  262 GDEEELQKENVK 273
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO_FRIAG (Oxygen-evolving enhancer protein 1, chloroplastic OS=Fritillaria agrestis GN=PSBO PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.001e-28
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = -3 
Query:  151 KNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 321
            K+ SSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLG+K PKDVKIQGIWYAQLE
Sbjct:  273 KDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGIWYAQLE 329

HSP 2 Score: 30.4166 bits (67), Expect = 3.001e-28
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = -1 
Query:  366 GGSTGYDNAIALPA 407
            GGS GYDNA+ALPA
Sbjct:  245 GGSAGYDNAVALPA 258

HSP 3 Score: 25.7942 bits (55), Expect = 3.001e-28
Identity = 10/13 (76.92%), Postives = 12/13 (92.31%), Query Frame = -2 
Query:  317 GDEEDLAKENIKE 355
            GDEE+L KENIK+
Sbjct:  262 GDEEELVKENIKD 274
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO1_ARATH (Oxygen-evolving enhancer protein 1-1, chloroplastic OS=Arabidopsis thaliana GN=PSBO1 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.863e-27
Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = -3 
Query:  151 KNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 321
            KNT++S G+ITL VTKSKPETGEVIGVFES+QPSDTDLGAKVPKDVKIQG+WY QLE
Sbjct:  276 KNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQLE 332

HSP 2 Score: 32.3426 bits (72), Expect = 1.863e-27
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -1 
Query:  366 GGSTGYDNAIALPA 407
            GGSTGYDNA+ALPA
Sbjct:  248 GGSTGYDNAVALPA 261

HSP 3 Score: 24.6386 bits (52), Expect = 1.863e-27
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = -2 
Query:  320 GDEEDLAKENIK 355
            GDEE+L KEN+K
Sbjct:  265 GDEEELVKENVK 276
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO2_ARATH (Oxygen-evolving enhancer protein 1-2, chloroplastic OS=Arabidopsis thaliana GN=PSBO2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.141e-27
Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = -3 
Query:  151 KNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 321
            KNT++S G+ITL +TKSKPETGEVIGVFES+QPSDTDLGAKVPKDVKIQG+WY Q+E
Sbjct:  275 KNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGVWYGQIE 331

HSP 2 Score: 32.3426 bits (72), Expect = 3.141e-27
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -1 
Query:  366 GGSTGYDNAIALPA 407
            GGSTGYDNA+ALPA
Sbjct:  247 GGSTGYDNAVALPA 260

HSP 3 Score: 25.0238 bits (53), Expect = 3.141e-27
Identity = 9/12 (75.00%), Postives = 12/12 (100.00%), Query Frame = -2 
Query:  320 GDEEDLAKENIK 355
            GDEE+L+KEN+K
Sbjct:  264 GDEEELSKENVK 275
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO_SOLTU (Oxygen-evolving enhancer protein 1, chloroplastic OS=Solanum tuberosum GN=PSBO PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.075e-27
Identity = 50/57 (87.72%), Postives = 53/57 (92.98%), Query Frame = -3 
Query:  151 KNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 321
            KNT+S TGKIT +VTKS P+TGEVIGVFESIQPSDTDLGAK PKDVKIQGIWYAQLE
Sbjct:  276 KNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGIWYAQLE 332

HSP 2 Score: 32.3426 bits (72), Expect = 4.075e-27
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -1 
Query:  366 GGSTGYDNAIALPA 407
            GGSTGYDNA+ALPA
Sbjct:  248 GGSTGYDNAVALPA 261

HSP 3 Score: 24.2534 bits (51), Expect = 4.075e-27
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = -2 
Query:  320 GDEEDLAKENIK 355
            GDEE+L KEN+K
Sbjct:  265 GDEEELQKENVK 276
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO_SPIOL (Oxygen-evolving enhancer protein 1, chloroplastic OS=Spinacia oleracea GN=PSBO PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.277e-26
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = -3 
Query:  148 KGTRKISPRRISKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLEQ 357
            +G  +   +  +KN +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAKVPKDVKI+G+WYAQLEQ
Sbjct:  262 RGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGVWYAQLEQ 331

HSP 2 Score: 32.3426 bits (72), Expect = 5.277e-26
Identity = 13/14 (92.86%), Postives = 14/14 (100.00%), Query Frame = -1 
Query:  366 GGSTGYDNAIALPA 407
            GGSTGYDNA+ALPA
Sbjct:  246 GGSTGYDNAVALPA 259
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO_PEA (Oxygen-evolving enhancer protein 1, chloroplastic OS=Pisum sativum GN=PSBO PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.208e-25
Identity = 49/58 (84.48%), Postives = 55/58 (94.83%), Query Frame = -3 
Query:  151 SKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 324
            +K+ +SS GKITLSVT++KPETGEVIGVFESIQPSDTDLGAK PKDVKIQG+WYAQLE
Sbjct:  271 NKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGVWYAQLE 328

HSP 2 Score: 30.0314 bits (66), Expect = 1.208e-25
Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = -1 
Query:  366 GGSTGYDNAIALPA 407
            G STGYDNA+ALPA
Sbjct:  244 GASTGYDNAVALPA 257

HSP 3 Score: 22.3274 bits (46), Expect = 1.208e-25
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = -2 
Query:  320 GDEEDLAKENIK 355
            GDEE+L KEN K
Sbjct:  261 GDEEELGKENNK 272
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO_WHEAT (Oxygen-evolving enhancer protein 1, chloroplastic OS=Triticum aestivum GN=PSBO PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.485e-25
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = -3 
Query:  151 KNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 321
            KN SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDL A  PKDVKIQG+WYAQLE
Sbjct:  269 KNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLEA--PKDVKIQGVWYAQLE 323

HSP 2 Score: 28.1054 bits (61), Expect = 7.485e-25
Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = -1 
Query:  369 GGSTGYDNAIALP 407
            GGSTGYDNA ALP
Sbjct:  241 GGSTGYDNAGALP 253

HSP 3 Score: 26.1794 bits (56), Expect = 7.485e-25
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = -2 
Query:  320 GDEEDLAKENIK 355
            GDEE+LAKEN+K
Sbjct:  258 GDEEELAKENVK 269
[Close]
BLAST of CN182151 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.114e-19
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = -3 
Query:  154 SKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQL 324
            SK+T++S G I   V K   ETGE+ GVFESIQPSDTDLGAKVPKD+K  G+WYAQ+
Sbjct:  278 SKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334

HSP 2 Score: 27.335 bits (59), Expect = 7.114e-19
Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = -1 
Query:  366 GGSTGYDNAIALPA 407
            GG++GYD A+ALPA
Sbjct:  253 GGASGYDTAVALPA 266

HSP 3 Score: 21.1718 bits (43), Expect = 7.114e-19
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = -2 
Query:  320 GDEEDLAKENIK 355
            GD+E+ AKEN K
Sbjct:  268 GDDEEYAKENSK 279
The following BLAST results are available for this feature:
BLAST of CN182151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
PSBO_TOBAC7.753e-3098.25Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SOLLC8.135e-2994.74Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_FRIAG3.001e-2892.98Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO1_ARATH1.863e-2785.96Oxygen-evolving enhancer protein 1-1, chloroplasti... [more]
PSBO2_ARATH3.141e-2782.46Oxygen-evolving enhancer protein 1-2, chloroplasti... [more]
PSBO_SOLTU4.075e-2787.72Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_SPIOL5.277e-2671.43Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_PEA1.208e-2584.48Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_WHEAT7.485e-2587.72Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_EUGGR7.114e-1966.67Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002A10_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182151 ID=CN182151; Name=CN182151; organism=Citrus sinensis; type=EST; length=410bp
GAGGATTATTATAGCATGCCATGATAATATACAGACGTGATAACATTCTC
AGTGCTACTAAATTGAATTACAGAAATGTTTAGCAACACCTTCAACATGT
TTCAAAATCTGAATAGGAATAAGTACACTCATACAAGAAAAGCTCTATTG
CTCAAGCTGTGCATACCAGATACCCTGGATCTTAACATCCTTTGGAACCT
TGGCTCCCAAATCAGTATCAGATGGCTGAATGCTCTCAAACACTCCAATA
ACCTCTCCGGTCTCAGGCTTGCTCTTGGTAACGCTGAGGGTGATCTTCCC
TGTTGAAGATGAAGTATTCTTTGATATTCTCCTTGGCGAGATCTTCCTCG
TCCCCTTCTTCCACCGGCAGGCAATGCAATAGCATTGTCATAACCAGTTG
AACCACCCCC
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