CN182148

Overview
NameCN182148
Unique NameCN182148
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 2.950e-95
Identity = 161/191 (84.29%), Postives = 180/191 (94.24%), Query Frame = -1
Query:  206 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 778
            VKSLMYQLCKGVAFCHGHG+LHRDLKPHNLLMDRKTM LKIADLGLARA+TLPIKKYTHEILTLWYRAPEVLLG+THYS AVDMWSVACIFAELVT+ ALFPGDSELQQLLHIFRLLGTPNE++WPGVS+L++WHEYPQW  Q +++AVP LD+ GL+LL +ML Y+PS+RISAKKAMEHPYFD+LDK+ L
Sbjct:  122 VKSLMYQLCKGVAFCHGHGVLHRDLKPHNLLMDRKTMMLKIADLGLARAYTLPIKKYTHEILTLWYRAPEVLLGATHYSPAVDMWSVACIFAELVTQKALFPGDSELQQLLHIFRLLGTPNEEIWPGVSTLVDWHEYPQWTAQPISSAVPGLDEKGLNLLSEMLHYEPSRRISAKKAMEHPYFDELDKSGL 312          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 346.665 bits (888), Expect = 8.583e-95
Identity = 164/192 (85.42%), Postives = 178/192 (92.71%), Query Frame = -1
Query:  206 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL-DKTRL 778
            VK LMYQLCKG+AFCHGHG+LHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP+KKYTHEILTLWYRAPEVLLG+THYST VDMWSV CIFAELVTK A+F GDSELQQLL IFRLLGTPNE+VWPGVS L +WHEYPQW P SL+TAVPNLD+ GLDLL +ML+Y+P+KRISAKKAMEHPYFDDL DK+ L
Sbjct:  124 VKCLMYQLCKGMAFCHGHGVLHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTGVDMWSVGCIFAELVTKQAIFAGDSELQQLLRIFRLLGTPNEEVWPGVSKLKDWHEYPQWKPLSLSTAVPNLDEAGLDLLSKMLEYEPAKRISAKKAMEHPYFDDLPDKSSL 315          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 339.347 bits (869), Expect = 1.370e-92
Identity = 156/186 (83.87%), Postives = 173/186 (93.01%), Query Frame = -1
Query:  221 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 778
            +KSLMYQLCKG+AFCHGHGILHRDLKPHNLLMD KTM LKIADLGLARAFTLP+KKYTHEILTLWYRAPEVLLG+THYSTAVDMWSV CIFAELVT  A+F GDSELQQLLHIF+L GTPNE++WPGVS+L NWHEYPQW P +L++AVPNLD+ G+DLL +MLQY+P+KRISAK AMEHPYFDDL
Sbjct:  122 IKSLMYQLCKGMAFCHGHGILHRDLKPHNLLMDPKTMRLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVGCIFAELVTNQAIFQGDSELQQLLHIFKLFGTPNEEMWPGVSTLKNWHEYPQWKPSTLSSAVPNLDEAGVDLLSKMLQYEPAKRISAKMAMEHPYFDDL 307          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.568e-88
Identity = 150/188 (79.79%), Postives = 167/188 (88.83%), Query Frame = -1
Query:  215 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 778
            VK LMYQLCKGVAFCHG G+LHRDLKPHNLLMDRKTM LKIADLGL+R+FT+P+KKYTHEILTLWYRAPEVLLG+ HYST VD+WSV CIFAEL T   LF GDSE+QQLLHIF+LLGTPNE+VWPGVS L NWHEYPQWNP  ++  V  LD D LDLLE+MLQY+PSKRISAKKAMEHPYF+D++K
Sbjct:  136 VKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLLGAAHYSTPVDIWSVGCIFAELATNQPLFAGDSEVQQLLHIFKLLGTPNEQVWPGVSKLPNWHEYPQWNPSKVSDLVHGLDADALDLLEKMLQYEPSKRISAKKAMEHPYFNDVNK 323          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 4.418e-83
Identity = 139/190 (73.16%), Postives = 164/190 (86.32%), Query Frame = -1
Query:  209 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTR 778
            +KS +YQLCKGVA CHGHG+LHRDLKP NLL+D++   LKIADLGL RAFT+P+K YTHEI+TLWYRAPEVLLGSTHYST VD+WSV CIFAE+V + ALFPGDSELQQLLHIFRLLGTP E+ WPGV+ L +WHE+PQW PQ L   VP+L+ +G+DLL +MLQY+P+ RISAK AMEHPYFD LDK++
Sbjct:  113 IKSFLYQLCKGVAHCHGHGVLHRDLKPQNLLVDKEKGILKIADLGLGRAFTVPMKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMVRRQALFPGDSELQQLLHIFRLLGTPTEEQWPGVTDLRDWHEFPQWKPQILERQVPSLEPEGVDLLSKMLQYNPANRISAKAAMEHPYFDSLDKSQ 302          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2)

HSP 1 Score: 296.975 bits (759), Expect = 7.799e-80
Identity = 134/190 (70.53%), Postives = 160/190 (84.21%), Query Frame = -1
Query:  209 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTR 778
            ++ LM+QLCKGVA CH HG+LHRDLKP NLL+ +    LKIADLGL RAFT+P+K YTHEI+TLWYRAPEVLLGSTHYST VDMWSV CIFAE+V + ALFPGDSE QQLLHIFRLLGTP E+ WPGVS+L +WH YP+W PQ L  AVP+L   G+DLL +ML+Y+P++RISAK A++HPYFD LDK++
Sbjct:  119 IQKLMFQLCKGVAHCHSHGVLHRDLKPQNLLLVKDKELLKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVSTLRDWHVYPKWEPQDLTLAVPSLSPQGVDLLTKMLKYNPAERISAKTALDHPYFDSLDKSQ 308          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 2.964e-79
Identity = 133/190 (70.00%), Postives = 162/190 (85.26%), Query Frame = -1
Query:  209 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTR 778
            V+  M+QL KGVA CH HG+LHRDLKP NLL+D+    LKIADLGL+RAFT+P+K YTHEI+TLWYRAPEVLLGSTHYSTAVD+WSV CIFAE++ + ALFPGDSE QQLLHIFRLLGTP E+ WPGV +L +WH YP+W PQ L+ AVP+L  +G+DLL QML+Y+P++RISAK A++HPYFD LDK++
Sbjct:  121 VQRFMFQLFKGVAHCHSHGVLHRDLKPQNLLLDKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQWPGVMALRDWHVYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSLDKSQ 310          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.509e-78
Identity = 135/190 (71.05%), Postives = 162/190 (85.26%), Query Frame = -1
Query:  209 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTR 778
            ++S ++QLCKGV+ CH HG+LHRDLKP NLL+D+    LKIADLGLARAFT+P+K YTHEI+TL YRAPEVLLGS+HYSTAVDM SV CIFAE+V + ALFPGDSE QQLLHIFRLLGTP+++ WPGVSSL +WH YPQW PQ+ A AVP+L  DGLDLL + L+YDP+ RISAK A++HPYFD LDK++
Sbjct:  115 IQSFLFQLCKGVSHCHAHGVLHRDLKPQNLLLDKDKGVLKIADLGLARAFTVPLKSYTHEIVTLSYRAPEVLLGSSHYSTAVDMSSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPSDEQWPGVSSLRDWHVYPQWEPQNSAPAVPSLGPDGLDLLTKTLKYDPADRISAKAALDHPYFDTLDKSQ 304          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.630e-69
Identity = 118/188 (62.77%), Postives = 153/188 (81.38%), Query Frame = -1
Query:  218 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE-YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 778
            +KS +YQ+ +GVA+CH H +LHRDLKP NLL+DR+T  LK+AD GLARAF +P++ +THE++TLWYRAPE+LLGS  YST VDMWSV CIFAE+V +  LFPGDSE+ +L  IFR+LGTPNE+ WPGVSSL ++   +P+W  Q LAT VP LD  GLDLL +ML+Y+P+KRI+A++A+EH YF DL+
Sbjct:  104 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRQYSTPVDMWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRVLGTPNEQSWPGVSSLPDYKSAFPKWQAQDLATIVPTLDPAGLDLLSKMLRYEPNKRITARQALEHEYFKDLE 291          
BLAST of CN182148 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 8.090e-69
Identity = 117/188 (62.23%), Postives = 152/188 (80.85%), Query Frame = -1
Query:  218 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH-EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 778
            +KS +YQ+  GVA+CH H +LHRDLKP NLL+DR+T  LK+AD GLARAF +P++ +THE++TLWYRAPE+LLG+  YST VD+WSV CIFAE+V +  LFPGDSE+ +L  IFR+LGTPNE+ WPGVS L ++   +P+W  Q LAT VPNLD  GLDLL +ML+Y+PSKRI+A++A+EH YF DL+
Sbjct:  104 IKSYLYQILHGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDFKTAFPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDLE 291          
The following BLAST results are available for this feature:
BLAST of CN182148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2D_ANTMA2.950e-9584.29Cell division control protein 2 homolog D OS=Antir... [more]
CKB22_ARATH8.583e-9585.42Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CKB21_ARATH1.370e-9283.87Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CKB21_ORYSJ1.568e-8879.79Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
CKB11_ORYSJ4.418e-8373.16Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
CKB11_ARATH7.799e-8070.53Cyclin-dependent kinase B1-1 OS=Arabidopsis thalia... [more]
CKB12_ARATH2.964e-7970.00Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
CDC2C_ANTMA2.509e-7871.05Cell division control protein 2 homolog C OS=Antir... [more]
CDKA1_ORYSJ1.630e-6962.77Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
CDC2_MAIZE8.090e-6962.23Cell division control protein 2 homolog OS=Zea may... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0002A09_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN182148 ID=CN182148; Name=CN182148; organism=Citrus sinensis; type=EST; length=778bp
GCAATCATTAGTCATAGAATTAGTCACTGAATATTAAATCCAACTTGAGA
GCCACCACAATATCCTAAAAACAAATATTACAAGACTGAAATATGCTTGA
GAGAAGCAAATAGACTCCTCCGCTACAGAAATCCCGTTTGCTGGGTTCTC
CAATCATCACAAACCAAGGATCCTAGTTTCCGTCACTAGTTGACACAGAT
CCTCAGAGTCTTGTCTTGTCCAGATCATCAAAGTATGGGTGTTCCATAGC
TTTCTTTGCTGAGATTCTCTTGGAGGGGTCATATTGCAACATTTGCTCAA
GCAGATCCAGGCCATCCTTGTCCAAATTTGGAACAGCTGTTGCTAGACTT
TGAGGGTTCCATTGCGGGTACTCATGCCAGTTCATTAAACTGCTAACTCC
AGGCCAGACTTTCTCATTGGGAGTGCCTAATAACCTGAAAATATGCAGAA
GCTGTTGGAGTTCAGAATCTCCAGGGAAAAGTGCTGTCTTTGTAACCAGT
TCCGCAAATATACAGGCAACAGACCACATATCAACTGCAGTTGAGTAATG
GGTGGACCCCAAAAGGACTTCCGGAGCCCTATACCAGAGGGTCAATATCT
CATGAGTATATTTCTTAATTGGAAGAGTAAATGCTCGAGCTAAACCAAGA
TCTGCTATCTTAAGTGTCATAGTCTTTCGGTCCATCAACAGATTGTGAGG
CTTAAGGTCCCTATGAAGGATTCCATGTCCATGGCAGAAAGCAACACCCT
TGCAAAGTTGGTACATTAAGCTCTTGAC
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