CN188893
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188893 vs. ExPASy Swiss-Prot
Match: SCL8_ARATH (Scarecrow-like protein 8 OS=Arabidopsis thaliana GN=SCL8 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.217e-31 Identity = 64/92 (69.57%), Postives = 73/92 (79.35%), Query Frame = -3 Query: 170 KVEEGLSRKLANSVACEGRDRVERFEVFGKWRAPMGMAGFELKPMSQIIAESMRT*LSSGNRVNPGFPVKEENGGICFGWMGRTFPVVFAWR 445 KVEEG+ RKL N+VACEG DR+ER EVFGKWR M MAGFEL P+S+ IAESM+ S GNRV+PGF VKE+NGG+CFGWMGR V AWR Sbjct: 552 KVEEGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMK---SRGNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
BLAST of CN188893 vs. ExPASy Swiss-Prot
Match: CIGR2_ORYSJ (Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.328e-13 Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = -3 Query: 173 LSRKLANSVACEGRDRVERFEVFGKWRAPMGMAGFELKPMSQIIAESMRT*LSSGNRVNPGFPVKEENGGICFGWMGRTFPVVFAW 430 L+R++ N +ACEG +R ER+E FGKW+A + MAGF P+S ++ ++RT L S + + + E +G + GW R V AW Sbjct: 461 LAREIVNLIACEGEERAERYEPFGKWKARLTMAGFRPSPLSSLVNATIRTLLQS---YSDNYKLAERDGALYLGWKSRPLVVSSAW 543
BLAST of CN188893 vs. ExPASy Swiss-Prot
Match: SCL21_ARATH (Scarecrow-like protein 21 OS=Arabidopsis thaliana GN=SCL21 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 9.684e-13 Identity = 33/87 (37.93%), Postives = 53/87 (60.92%), Query Frame = -3 Query: 170 LSRKLANSVACEGRDRVERFEVFGKWRAPMGMAGFELKPMSQIIAESMRT*LSSGNRVNPGFPVKEENGGICFGWMGRTFPVVFAWR 430 ++R + N +ACEG +R+ER E+ GKW++ MAGFE P+S II+ ++R L + G+ ++E +G + GWM R AW+ Sbjct: 330 MARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRD---YSNGYAIEERDGALYLGWMDRILVSSCAWK 413
BLAST of CN188893 vs. ExPASy Swiss-Prot
Match: SCL1_ARATH (Scarecrow-like protein 1 OS=Arabidopsis thaliana GN=SCL1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.806e-12 Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = -3 Query: 170 LSRKLANSVACEGRDRVERFEVFGKWRAPMGMAGFELKPMSQIIAESMRT*LSSGNRVNPGFPVKEENGGICFGWMGRTFPVVFAWR 430 L+R + N VACEG +R+ER+E GKWRA M MAGF KPMS + +++ + + + +KEE G + F W ++ V AWR Sbjct: 509 LARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIK--QQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
BLAST of CN188893 vs. ExPASy Swiss-Prot
Match: PAT1_ARATH (Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.806e-12 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = -3 Query: 170 LSRKLANSVACEGRDRVERFEVFGKWRAPMGMAGFELKPMSQIIAESMRT*LSSGNRVNPGFPVKEENGGICFGWMGRTFPVVFAWR 430 L+R + N +ACEG DRVER E+ GKWR+ GMAGF P+S ++ ++++ L + + ++E +G + GWM R AW+ Sbjct: 407 LARDVVNIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLL---RNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490 The following BLAST results are available for this feature:
BLAST of CN188893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188893 ID=CN188893; Name=CN188893; organism=Citrus sinensis; type=EST; length=450bpback to top |